Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30073
(348 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 138 1e-33
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 136 4e-33
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 133 3e-32
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 130 3e-31
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 62 1e-10
03_01_0034 + 318432-318825,318902-319851 62 1e-10
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 62 2e-10
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 62 2e-10
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 62 2e-10
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 62 2e-10
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 61 2e-10
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 58 1e-09
05_07_0242 + 28615573-28616304 33 0.081
01_06_1014 - 33810112-33811995 31 0.19
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 0.57
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 1.0
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 1.3
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 2.3
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 28 2.3
06_01_0500 + 3584743-3585516 27 3.1
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 27 3.1
01_01_1141 + 9052511-9052573,9052626-9052928 27 3.1
07_03_1772 + 29411874-29413218,29413355-29413421,29413749-294138... 27 4.0
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 27 4.0
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488... 27 4.0
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 27 4.0
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 27 4.0
01_05_0626 + 23797278-23797618,23797629-23798097 27 4.0
01_01_0975 - 7686297-7686458,7687117-7687245,7687754-7687831,768... 27 4.0
03_05_0141 - 21210176-21212140 27 5.3
02_05_0438 + 28997551-28997664,28997769-28997977,28998087-28998372 26 7.1
07_03_0821 + 21760655-21760912,21761158-21761328,21761850-217620... 26 9.3
07_03_0033 + 12656255-12656297,12657402-12657408,12657484-126580... 26 9.3
06_01_0369 + 2651192-2651862,2652103-2652158,2652816-2652874,265... 26 9.3
04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912 26 9.3
04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051 26 9.3
03_06_0203 - 32337928-32338025,32338745-32338820,32338905-323389... 26 9.3
02_04_0090 - 19643182-19643322,19644192-19644335,19644563-196446... 26 9.3
02_01_0746 + 5554686-5556179 26 9.3
01_06_1210 + 35430143-35430796,35430912-35431004,35431397-354315... 26 9.3
01_01_0512 + 3735005-3735580 26 9.3
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 138 bits (334), Expect = 1e-33
Identities = 62/71 (87%), Positives = 68/71 (95%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCM+SN TA+AE ++R+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 183 LEKDYEEVGMD 215
LEKDYEEVG +
Sbjct: 428 LEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 136 bits (329), Expect = 4e-33
Identities = 60/72 (83%), Positives = 69/72 (95%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCM+SN+T++ E ++R+DHKFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG +S
Sbjct: 428 LEKDYEEVGAES 439
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 133 bits (322), Expect = 3e-32
Identities = 60/71 (84%), Positives = 67/71 (94%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKV+RAVCM+SN TA+AE ++R+D KFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 449 LAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 508
Query: 183 LEKDYEEVGMD 215
LEKDYEEVG +
Sbjct: 509 LEKDYEEVGAE 519
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 130 bits (314), Expect = 3e-31
Identities = 58/71 (81%), Positives = 67/71 (94%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCM+SN+T++ E ++R+D KFDLMY+KRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 183 LEKDYEEVGMD 215
LEKDYEEVG +
Sbjct: 428 LEKDYEEVGSE 438
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 62.1 bits (144), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 192 DYEE 203
+Y++
Sbjct: 421 EYQQ 424
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 62.1 bits (144), Expect = 1e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 192 DYEE 203
+Y++
Sbjct: 421 EYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 192 DYEE 203
+Y++
Sbjct: 421 EYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 192 DYEE 203
+Y++
Sbjct: 421 EYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = +3
Query: 21 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 200
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 385 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 444
Query: 201 E 203
+
Sbjct: 445 Q 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 61.7 bits (143), Expect = 2e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = +3
Query: 21 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 200
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 201 E 203
+
Sbjct: 424 Q 424
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 61.3 bits (142), Expect = 2e-10
Identities = 24/61 (39%), Positives = 41/61 (67%)
Frame = +3
Query: 21 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 200
A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 544 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 603
Query: 201 E 203
+
Sbjct: 604 Q 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 58.4 bits (135), Expect = 1e-09
Identities = 23/61 (37%), Positives = 40/61 (65%)
Frame = +3
Query: 21 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 200
A + N+T+I E + R+ +F M+ ++AF+HWY EGM+E EF+EA ++ L +Y+
Sbjct: 380 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQ 439
Query: 201 E 203
+
Sbjct: 440 Q 440
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.7 bits (71), Expect = 0.081
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = -1
Query: 246 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQGE 67
L +P P R P LL P + QP PH L PP+P+ T + T + +G
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 66 P 64
P
Sbjct: 149 P 149
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.19
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 99 AKRAFVHWYVGEGMEEGEFSEAREDL 176
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 0.57
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 237 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 109
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = -1
Query: 237 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAW 100
P PR RSP L RG P +RR P P RR + + W
Sbjct: 319 PPPRRLRSPRHLSPRRDRGSP----IRRR--SPLPRRRLTPPRRMW 358
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 177 PGPHGLRRTLPPPYPHRRTSARKH 106
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 243 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 97
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -1
Query: 225 LQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 97
L R+ CR+ +P +P H L +P P+PH +A + A+R
Sbjct: 285 LLRAACRVRASPCL-RPLAHHLLDHIPRPHPHLLHAAARLAYR 326
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.9 bits (59), Expect = 2.3
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -2
Query: 227 AFSGVHADFFVILLEGSQVLTG 162
+F G ADFF +LL G+ VLTG
Sbjct: 88 SFRGRTADFFYMLLFGATVLTG 109
>06_01_0500 + 3584743-3585516
Length = 257
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -1
Query: 189 SRGQPGPHGLRRTLPPPYPHRRTSA 115
S+ P P +R PPP PHRR A
Sbjct: 9 SKKMPTPAVMRIRSPPPDPHRRARA 33
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = -1
Query: 237 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 127
P P S R PS P P + PPP PHR
Sbjct: 21 PKPFKPLSSAAPFRRPSPPPPPPSPVPSPAPPPPPHR 57
>01_01_1141 + 9052511-9052573,9052626-9052928
Length = 121
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = -1
Query: 234 HPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQG 70
H R+ L P G P PHG +R P R +A A ++ G +C G
Sbjct: 9 HCSAARAAVALPPLPLAGSPQPHGTKRRPVEPASRRLPAAAAPARQSTGGSCEVG 63
>07_03_1772 +
29411874-29413218,29413355-29413421,29413749-29413896,
29415293-29415416,29416340-29416590,29416923-29418449,
29418786-29418896,29419576-29419734,29419827-29421734
Length = 1879
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 131 TDVPVHESTLGVHEVELVVKASP 63
TD PV++ T+G H+++L+ A P
Sbjct: 226 TDDPVNKCTIGDHKLQLLTHAEP 248
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -1
Query: 261 SLVSTLRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYP 133
S VS++ P+ + +P +RNP+ P P RRT PPP P
Sbjct: 14 SKVSSVSSSKPKPKPTP---IRNPTPPPPPPR--RRTPPPPPP 51
>05_01_0558 -
4880811-4880996,4881098-4881178,4881247-4881393,
4881985-4882029,4882370-4883134
Length = 407
Score = 27.1 bits (57), Expect = 4.0
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = -1
Query: 213 PCRLL--RNPSRGQP--GPHGLRR-TLPPPYPHRRTSARKHAWRT*GRT 82
P R L RNPS P PH L + PPP PHR T R H+ + RT
Sbjct: 19 PARRLPRRNPSLPFPLRPPHRLSPFSAPPPEPHRLT-YRTHSTSSSSRT 66
>04_04_1079 -
30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 186 RGQPGPHGLRRTLPPPYPHRRTSARK 109
RG+P R P P P RRT AR+
Sbjct: 885 RGRPSSSASRTAKPAPRPVRRTRARR 910
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 192 PSRGQPGPHGLRRTLPPPYPHRRTSAR 112
P R P P +++ PPP P + T AR
Sbjct: 370 PPRPPPPPPPIKKGAPPPAPPKATMAR 396
>01_05_0626 + 23797278-23797618,23797629-23798097
Length = 269
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 100 PSVLSCTGTSVRVWRRESSPKPVRTW 177
P ++ GT+V VW R+ K V W
Sbjct: 218 PCIVCVVGTTVSVWMRKFDEKGVERW 243
>01_01_0975 -
7686297-7686458,7687117-7687245,7687754-7687831,
7688011-7688469,7690648-7690788,7691771-7692421
Length = 539
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = -1
Query: 192 PSRGQPGPHGLRRTLPPPYPHRRTSARKHAW 100
P+ G P PH PPP+P H W
Sbjct: 322 PTIGFPPPHAAAMVPPPPHPPPFCRPPLHVW 352
>03_05_0141 - 21210176-21212140
Length = 654
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = -1
Query: 246 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 109
L LP P PC R+P P T PP HRRT++ +
Sbjct: 3 LLLPPPPTPTPPCAS-RDPLHAAPRRSRSPSTSRPPSRHRRTASAR 47
>02_05_0438 + 28997551-28997664,28997769-28997977,28998087-28998372
Length = 202
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 61 LGLALTTSSTSCTPSVLSCTGTSVRV 138
LGL TT S+SC S S T T++R+
Sbjct: 162 LGLTSTTKSSSCATSAASAT-TTIRL 186
>07_03_0821 +
21760655-21760912,21761158-21761328,21761850-21762026,
21762165-21762242
Length = 227
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 233 TLAFSGVHADFFVILLEGSQVLTGFGELSLLHTLTDVP 120
T++F G FF I ++G Q + SLL ++ +VP
Sbjct: 188 TISFYGYAESFFTIEVKGEQDVVMVELRSLLSSIVEVP 225
>07_03_0033 +
12656255-12656297,12657402-12657408,12657484-12658016,
12658106-12658224,12658329-12658688,12659602-12659784
Length = 414
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 103 SVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREPKST 252
S+ GT V V R+ S + PS ++ + + +PL A ++EPK T
Sbjct: 357 SMAGSAGTGVNVGRQRSP----QVTAPSPQVHEPPSISPLCAAIQEPKYT 402
>06_01_0369 +
2651192-2651862,2652103-2652158,2652816-2652874,
2653094-2653165,2653356-2653439,2654522-2654629,
2655543-2655605,2655733-2655813,2656316-2656421,
2657111-2657244,2657753-2657830,2658462-2658500,
2658673-2658755,2659228-2659300,2659842-2660012
Length = 625
Score = 25.8 bits (54), Expect = 9.3
Identities = 16/31 (51%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -1
Query: 261 SLVSTLRLPHPRLQRSPCRLL-RNPSRGQPG 172
SL+ LR PHPRL P LL R S PG
Sbjct: 15 SLLRLLRRPHPRLLPPPPPLLTRFLSSSSPG 45
>04_04_0630 - 26719136-26719150,26720065-26720134,26720438-26721912
Length = 519
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 228 RLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTS 118
RL RS LR+ +R + HG RR PPP HR+ S
Sbjct: 46 RLLRSSS--LRSAARHRGRRHGTRRA-PPPPRHRQLS 79
>04_03_0816 + 19992641-19993197,19994933-19995023,19997761-19998051
Length = 312
Score = 25.8 bits (54), Expect = 9.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 159 RRTLPPPYPHRRTSARKHAWRT*GRTCG 76
RR P P RR A +WR GR CG
Sbjct: 45 RRPSPDPQAARRRGAAVQSWR--GRGCG 70
>03_06_0203 -
32337928-32338025,32338745-32338820,32338905-32338971,
32339181-32339275,32340062-32340151,32340293-32340340,
32340764-32341069
Length = 259
Score = 25.8 bits (54), Expect = 9.3
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
Frame = -1
Query: 231 PRLQRSPCRLL------RNPSRGQPGPHGLRRTLP-PPYPH 130
PRL SP +L + P + QPG R LP PP PH
Sbjct: 49 PRLVSSPAKLTDDATPPQPPPQPQPGDRRRRPRLPDPPRPH 89
>02_04_0090 -
19643182-19643322,19644192-19644335,19644563-19644626,
19644710-19644796,19645371-19645513,19645706-19645771,
19645954-19646046,19646165-19646230,19646363-19646433,
19646882-19646982,19647217-19647317,19647421-19647528,
19647639-19648064
Length = 536
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 156 RTLPPPYPHRRTSARKHA 103
R PPP PHRR +HA
Sbjct: 12 RLAPPPPPHRRGRPPRHA 29
>02_01_0746 + 5554686-5556179
Length = 497
Score = 25.8 bits (54), Expect = 9.3
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -1
Query: 231 PRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTS 118
P L + R+P RG G HG PPP R S
Sbjct: 428 PHLNLHGVTVSRSPLRGLVGLHGSSLMTPPPTDSGRRS 465
>01_06_1210 +
35430143-35430796,35430912-35431004,35431397-35431546,
35431817-35432076,35433378-35433641,35434475-35434682
Length = 542
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +3
Query: 75 DHKFDLMYAKRAFVHWY 125
D+ FD+++ R VHWY
Sbjct: 371 DNSFDVIHCARCRVHWY 387
>01_01_0512 + 3735005-3735580
Length = 191
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 190 RITKKSAWTPLKARVREPKSTNQ*NIFYGALAP 288
R + + WTP RV EP S +YG P
Sbjct: 139 RRSGRDGWTPQWVRVYEPTSDTPSTFYYGDPLP 171
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,749,796
Number of Sequences: 37544
Number of extensions: 166063
Number of successful extensions: 826
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 796
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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