Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30073
(348 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 153 4e-38
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 4e-38
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 4e-38
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 4e-38
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 153 4e-38
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 153 4e-38
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 153 4e-38
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 153 4e-38
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 153 4e-38
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 153 4e-38
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 7e-38
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 6e-37
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 149 8e-37
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 140 3e-34
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 122 8e-29
SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 2e-19
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 63 5e-11
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 63 5e-11
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 63 5e-11
SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34) 62 1e-10
SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28) 62 1e-10
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 56 1e-08
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 54 3e-08
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 38 0.002
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 34 0.036
SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4) 28 1.8
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 28 1.8
SB_37750| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.8
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 28 1.8
SB_6385| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00099) 27 3.2
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.2
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.5
SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064) 27 5.5
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 26 7.3
SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7) 23 8.1
SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 352 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 411
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 412 LEKDYEEVGVDS 423
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 305 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 364
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 365 LEKDYEEVGVDS 376
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 1148 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 1207
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 1208 LEKDYEEVGVDS 1219
Score = 144 bits (350), Expect = 1e-35
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 739 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 798
Query: 183 LEKDYEE 203
LEKDYEE
Sbjct: 799 LEKDYEE 805
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 428 LEKDYEEVGVDS 439
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 333 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 392
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 393 LEKDYEEVGVDS 404
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 801 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 860
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 861 LEKDYEEVGVDS 872
Score = 144 bits (349), Expect = 2e-35
Identities = 66/67 (98%), Positives = 67/67 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTA+AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 183 LEKDYEE 203
LEKDYEE
Sbjct: 428 LEKDYEE 434
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 953 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 1012
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 1013 LEKDYEEVGVDS 1024
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 293 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 352
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 353 LEKDYEEVGVDS 364
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 166 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 225
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 226 LEKDYEEVGVDS 237
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 153 bits (371), Expect = 4e-38
Identities = 71/72 (98%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 368 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 427
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 428 LEKDYEEVGVDS 439
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 152 bits (369), Expect = 7e-38
Identities = 71/72 (98%), Positives = 71/72 (98%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 520 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 579
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG DS
Sbjct: 580 LEKDYEEVGADS 591
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 149 bits (361), Expect = 6e-37
Identities = 69/72 (95%), Positives = 71/72 (98%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 784 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 843
Query: 183 LEKDYEEVGMDS 218
LEKDYEEV ++S
Sbjct: 844 LEKDYEEVAVES 855
Score = 144 bits (350), Expect = 1e-35
Identities = 67/67 (100%), Positives = 67/67 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 353 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 412
Query: 183 LEKDYEE 203
LEKDYEE
Sbjct: 413 LEKDYEE 419
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 149 bits (360), Expect = 8e-37
Identities = 68/72 (94%), Positives = 72/72 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQR+VCMLSNTTAIA+AWARL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 66 LAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 125
Query: 183 LEKDYEEVGMDS 218
LEKDYEEVG+DS
Sbjct: 126 LEKDYEEVGVDS 137
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 140 bits (339), Expect = 3e-34
Identities = 64/67 (95%), Positives = 67/67 (100%)
Frame = +3
Query: 3 LAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 182
LAKVQR+VCMLSNTTAIA+AWARL+HKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA
Sbjct: 166 LAKVQRSVCMLSNTTAIADAWARLNHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAA 225
Query: 183 LEKDYEE 203
LEKDYEE
Sbjct: 226 LEKDYEE 232
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 122 bits (294), Expect = 8e-29
Identities = 55/56 (98%), Positives = 56/56 (100%)
Frame = +3
Query: 51 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 218
IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 297 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 352
>SB_57880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 91.1 bits (216), Expect = 2e-19
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = +3
Query: 84 FDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 218
+D YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG+DS
Sbjct: 9 YDHDYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 53
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 63.3 bits (147), Expect = 5e-11
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 192 DYEE 203
+Y++
Sbjct: 421 EYQQ 424
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 63.3 bits (147), Expect = 5e-11
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 306 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 365
Query: 192 DYEE 203
+Y++
Sbjct: 366 EYQQ 369
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 63.3 bits (147), Expect = 5e-11
Identities = 24/64 (37%), Positives = 43/64 (67%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ + + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 361 LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 192 DYEE 203
+Y++
Sbjct: 421 EYQQ 424
>SB_44780| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-34)
Length = 747
Score = 62.1 bits (144), Expect = 1e-10
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ A + N TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 126 LKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIA 185
Query: 192 DYEE 203
+Y++
Sbjct: 186 EYQQ 189
>SB_17651| Best HMM Match : Tubulin_C (HMM E-Value=4.7e-28)
Length = 271
Score = 62.1 bits (144), Expect = 1e-10
Identities = 25/64 (39%), Positives = 42/64 (65%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 191
++ A + N TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 188 LKMAATFVGNNTAIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMHDLIA 247
Query: 192 DYEE 203
+Y++
Sbjct: 248 EYQQ 251
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 55.6 bits (128), Expect = 1e-08
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +3
Query: 21 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 200
A C+ SNT AI E + R+ + LM+ +RAF+HWY EGM+ +F EA D+ L Y+
Sbjct: 270 ASCISSNT-AIQELFKRIRLHYKLMFRRRAFLHWYTEEGMDSQQFEEADNDILDLISTYQ 328
Query: 201 E 203
+
Sbjct: 329 Q 329
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 54.0 bits (124), Expect = 3e-08
Identities = 23/54 (42%), Positives = 35/54 (64%)
Frame = +3
Query: 12 VQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEARED 173
++ A L N+TAI EA+ R +F M+ +RAF+HWY EGM+ EF+E + +
Sbjct: 180 LKNAATFLYNSTAIQEAFRRFTEQFAAMFRRRAFLHWYTTEGMDPLEFTEIKRN 233
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 38.3 bits (85), Expect = 0.002
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +3
Query: 33 LSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVG-EGMEEGEFSEAREDLAALEKDY 197
L+N + I + L +F +Y ++A VH Y +G+E G+F + E L+ L ++Y
Sbjct: 415 LANNSCIKNTFVELKDRFMKLYKRKAHVHHYTHVDGLEVGQFDDGLESLSWLIQEY 470
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 33.9 bits (74), Expect = 0.036
Identities = 18/61 (29%), Positives = 34/61 (55%)
Frame = +3
Query: 15 QRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKD 194
+++V +LSN+ +++ K M+A RA+VH Y+ G+ E F ++ L + K+
Sbjct: 411 EKSVTLLSNSQTHVGPLSKVVGKAWTMFASRAYVHQYLRFGISEDAFVDSFACLEQVVKN 470
Query: 195 Y 197
Y
Sbjct: 471 Y 471
>SB_23612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1021
Score = 31.1 bits (67), Expect = 0.26
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = -1
Query: 231 PRLQRSPCRLLRNPSRGQPGPHGLR---RTLPPPYPHRRTSARKH 106
PR QR +P+ P L R+ PPPYP RTS H
Sbjct: 737 PRQQRMMTTTAHSPTAQSPSADSLGSSVRSPPPPYPGSRTSGNPH 781
>SB_11512| Best HMM Match : E-MAP-115 (HMM E-Value=1.4)
Length = 639
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 255 VSTLRLP--HPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSA 115
V TL+ P PR R P R P+R QP P L R+ P P P R S+
Sbjct: 561 VDTLQTPIATPRSARPPSDSPR-PARPQPEPRHL-RSPPEPKPRHRDSS 607
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 28.3 bits (60), Expect = 1.8
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -1
Query: 192 PSRGQPGPHGLRRTLPPPYPHRRTSA 115
PSRG P P R + PPP P R +A
Sbjct: 300 PSRGAPPPPPSRGSAPPPPPARMGTA 325
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -1
Query: 192 PSRGQ--PGPHGLRRTLPPPYPHRRTSAR 112
PSRG P P T PPP P R+S R
Sbjct: 309 PSRGSAPPPPPARMGTAPPPPPPSRSSQR 337
>SB_37750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 759
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/65 (26%), Positives = 27/65 (41%)
Frame = +1
Query: 64 GLALTTSSTSCTPSVLSCTGTSVRVWRRESSPKPVRTWLPSRRITKKSAWTPLKARVREP 243
G L T T V+ C G +W + + P+ + R S +T L+ + E
Sbjct: 110 GTLLLTIHIYLTTGVILCQGIGFYIWAKLAFPRLKEAVDNAIRSNDDSTFTELEKKKAEN 169
Query: 244 KSTNQ 258
K TN+
Sbjct: 170 KPTNE 174
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = -1
Query: 255 VSTLRLP--HPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSA 115
V TL+ P PR R P R P+R QP P L R+ P P P R S+
Sbjct: 2580 VDTLQTPIATPRSARPPSDSPR-PARPQPEPRHL-RSPPEPKPRHRDSS 2626
>SB_6385| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.00099)
Length = 437
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 105 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 203
RAFV ++ EG EE D A +E+D EE
Sbjct: 70 RAFVTRFMAEGCEEKTLEMMSRDDAFIEEDVEE 102
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.1 bits (57), Expect = 4.2
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = +1
Query: 67 LALTTSSTSCTPSVLS--CTGTSVRVWRRESSP-KPVRTWLPSRRITKKSAWTP 219
L L+T ST CTPS S T ++ R S+P P PS IT + TP
Sbjct: 7 LKLSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPSTPSTP 60
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 183 GQPGPHGLRRTLPPPYPHRRTSARKHAWRT*G 88
G PGP GLR + PP T +W + G
Sbjct: 758 GNPGPPGLRGDVGPPGEQGPTGVPGESWTSGG 789
>SB_37864| Best HMM Match : Extensin_2 (HMM E-Value=0.064)
Length = 1230
Score = 26.6 bits (56), Expect = 5.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 240 LPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHR 127
+P+P +Q+ P + P++ +P P R P P P+R
Sbjct: 527 IPNPMMQQQPLQYGPAPNKYRPAPQPYR---PAPEPYR 561
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 26.2 bits (55), Expect = 7.3
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -1
Query: 186 RGQPGPHGLRRTLPPPYP-HRRTSA 115
R P P R +PPP+P RRT A
Sbjct: 1471 RRTPAPDPAERRVPPPFPAERRTPA 1495
>SB_29945| Best HMM Match : DUF125 (HMM E-Value=1.7)
Length = 608
Score = 23.0 bits (47), Expect(2) = 8.1
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 10/43 (23%)
Frame = -1
Query: 198 RNPSRGQPGPHG-----LRRTLPPPYPHR-----RTSARKHAW 100
R +R Q G HG RT Y R RT AR+HAW
Sbjct: 223 RRHARTQEGAHGGITRRRARTYAETYTGRARAQTRTHARRHAW 265
Score = 21.4 bits (43), Expect(2) = 8.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1
Query: 126 RTSARKHAWR 97
RT R+HAWR
Sbjct: 288 RTHPRRHAWR 297
>SB_32588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1135
Score = 25.8 bits (54), Expect = 9.7
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 192 PSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 97
P+R PGPHG PPP P R+ WR
Sbjct: 1036 PTRPIPGPHG--AATPPPGPPGGPEERR--WR 1063
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 25.8 bits (54), Expect = 9.7
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 192 PSRGQPGPHGLRRTLPPPYPHRR 124
PS G G HG + PPP P +
Sbjct: 607 PSDGSQGSHGQKDPPPPPPPRNK 629
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,597,541
Number of Sequences: 59808
Number of extensions: 172238
Number of successful extensions: 704
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 702
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 523129866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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