Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30072
(723 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 28 0.067
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 26 0.27
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 26 0.27
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 26 0.27
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 26 0.27
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 26 0.27
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 26 0.27
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.47
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.62
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 24 1.4
AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 22 5.8
AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein. 22 5.8
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 28.3 bits (60), Expect = 0.067
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T TS+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQ 164
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.27
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 26.2 bits (55), Expect = 0.27
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.27
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 26.2 bits (55), Expect = 0.27
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 26.2 bits (55), Expect = 0.27
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 20 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 79
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 80 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 120
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 26.2 bits (55), Expect = 0.27
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 25.4 bits (53), Expect = 0.47
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 1/101 (0%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLAPTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAPSCPARDIPA-PSTLCTSR 629
S+ L T S + G+ +P + P P+T S+
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQ 164
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 25.0 bits (52), Expect = 0.62
Identities = 18/83 (21%), Positives = 32/83 (38%)
Frame = +3
Query: 330 HRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDPLIKVNDSIQLDIATTKIMD 509
H + P Y + +R+A+ P TH + +Y D + D++T
Sbjct: 64 HGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQDLSTNGAPP 123
Query: 510 SSSLSLGTCV*SREAVTWGVWAP 578
S+ L T S + G+ +P
Sbjct: 124 RSTPPLSTPSNSNATKSSGLTSP 146
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = -3
Query: 136 KSPGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
K PG S GD + + V H T++ W
Sbjct: 104 KMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein.
Length = 712
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 130 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
>AY884061-1|AAX84202.1| 717|Tribolium castaneum laccase 2A protein.
Length = 717
Score = 21.8 bits (44), Expect = 5.8
Identities = 8/30 (26%), Positives = 15/30 (50%)
Frame = -3
Query: 130 PGASTRATCGDRLTVSVHTHRQVCPTSMLW 41
PG S + GD++ + V H + ++ W
Sbjct: 172 PGPSIQVCEGDKVVIDVENHIEGNEVTLHW 201
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,086
Number of Sequences: 336
Number of extensions: 4246
Number of successful extensions: 20
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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