Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30071
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 155 2e-38
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 155 2e-38
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 155 2e-38
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 153 2e-37
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 152 2e-37
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 152 2e-37
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 151 7e-37
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 34 0.091
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 34 0.091
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 3.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 3.4
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 29 4.5
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 155 bits (377), Expect = 2e-38
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+
Sbjct: 71 HAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAI 130
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPTY 512
KFYT++G WDLVGNNTPIFFIRDP +
Sbjct: 131 KFYTEEGNWDLVGNNTPIFFIRDPIH 156
Score = 130 bits (313), Expect = 1e-30
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIHTQKRNP THLKDP+M +D RPE +HQ+++LF DRG+PDGYRHMNGYGSHTF
Sbjct: 157 FPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTF 216
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN G +VKFH+
Sbjct: 217 KMVNKDGKAIYVKFHF 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 52 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 232 ERIPERVV 255
ERIPERVV
Sbjct: 63 ERIPERVV 70
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 155 bits (377), Expect = 2e-38
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+
Sbjct: 71 HAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAI 130
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPTY 512
KFYT++G WDLVGNNTPIFFIRDP +
Sbjct: 131 KFYTEEGNWDLVGNNTPIFFIRDPIH 156
Score = 130 bits (313), Expect = 1e-30
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIHTQKRNP THLKDP+M +D RPE +HQ+++LF DRG+PDGYRHMNGYGSHTF
Sbjct: 157 FPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTF 216
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN G +VKFH+
Sbjct: 217 KMVNKDGKAIYVKFHF 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 52 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 232 ERIPERVV 255
ERIPERVV
Sbjct: 63 ERIPERVV 70
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 155 bits (377), Expect = 2e-38
Identities = 66/86 (76%), Positives = 76/86 (88%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKGAGA GYFEVTHDI+KY A +F +GK+TP+ +RFSTVGGESGSADT RDPRGFA+
Sbjct: 71 HAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTARDPRGFAI 130
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPTY 512
KFYT++G WDLVGNNTPIFFIRDP +
Sbjct: 131 KFYTEEGNWDLVGNNTPIFFIRDPIH 156
Score = 130 bits (313), Expect = 1e-30
Identities = 52/76 (68%), Positives = 63/76 (82%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIHTQKRNP THLKDP+M +D RPE +HQ+++LF DRG+PDGYRHMNGYGSHTF
Sbjct: 157 FPNFIHTQKRNPQTHLKDPNMIFDFWLHRPEALHQVMFLFSDRGLPDGYRHMNGYGSHTF 216
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN G +VKFH+
Sbjct: 217 KMVNKDGKAIYVKFHF 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 52 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 232 ERIPERVV 255
ERIPERVV
Sbjct: 63 ERIPERVV 70
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 153 bits (370), Expect = 2e-37
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++
Sbjct: 71 HAKGAGAHGYFEVTHDITKYGKADMFHKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSL 130
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPT-YSRVLSILRRETLQHI 557
KFYT++G WDLVGNNTPIFFIRD + + L+R H+
Sbjct: 131 KFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 172
Score = 105 bits (251), Expect = 4e-23
Identities = 43/76 (56%), Positives = 59/76 (77%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIH KRNP TH++DP+ +D RPE+I Q+++L+ DRGIPDG+R MNGYG+HTF
Sbjct: 157 FPNFIHALKRNPQTHMRDPNALFDFWMNRPESI-QVMFLYSDRGIPDGFRFMNGYGAHTF 215
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN +G + KFH+
Sbjct: 216 KMVNKEGNPIYCKFHF 231
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 52 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 232 ERIPERVV 255
ERIPERVV
Sbjct: 63 ERIPERVV 70
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 152 bits (369), Expect = 2e-37
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++
Sbjct: 71 HAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSL 130
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPT-YSRVLSILRRETLQHI 557
KFYT++G WDLVGNNTPIFFIRD + + L+R H+
Sbjct: 131 KFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 172
Score = 112 bits (270), Expect = 2e-25
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIH KRNP TH++DP+ +D RPE+IHQ+++L+ DRGIPDG+R MNGYG+HTF
Sbjct: 157 FPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAHTF 216
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN +G + KFH+
Sbjct: 217 KMVNKEGNPIYCKFHF 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 52 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 232 ERIPERVV 255
ERIPERVV
Sbjct: 63 ERIPERVV 70
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 152 bits (369), Expect = 2e-37
Identities = 69/102 (67%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKGAGA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++
Sbjct: 71 HAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSL 130
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPT-YSRVLSILRRETLQHI 557
KFYT++G WDLVGNNTPIFFIRD + + L+R H+
Sbjct: 131 KFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 172
Score = 112 bits (270), Expect = 2e-25
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIH KRNP TH++DP+ +D RPE+IHQ+++L+ DRGIPDG+R MNGYG+HTF
Sbjct: 157 FPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAHTF 216
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN +G + KFH+
Sbjct: 217 KMVNKEGNPIYCKFHF 232
Score = 82.2 bits (194), Expect = 3e-16
Identities = 39/68 (57%), Positives = 50/68 (73%)
Frame = +1
Query: 52 DPATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
DP+ +QL YK+T P ITT +GAP+ KTA+ T G+ GP L+QDV ++DEM+ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 232 ERIPERVV 255
ERIPERVV
Sbjct: 63 ERIPERVV 70
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 151 bits (365), Expect = 7e-37
Identities = 68/102 (66%), Positives = 80/102 (78%), Gaps = 1/102 (0%)
Frame = +3
Query: 255 HAKGAGAFGYFEVTHDITKYSAAKVFESIGKRTPIAVRFSTVGGESGSADTVRDPRGFAV 434
HAKG GA GYFEVTHDITKY A +F +GK+TP+ VRFSTV GESGSADTVRDPRGF++
Sbjct: 86 HAKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRDPRGFSL 145
Query: 435 KFYTDDGVWDLVGNNTPIFFIRDPT-YSRVLSILRRETLQHI 557
KFYT++G WDLVGNNTPIFFIRD + + L+R H+
Sbjct: 146 KFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIHALKRNPQTHM 187
Score = 112 bits (270), Expect = 2e-25
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +2
Query: 512 FPSFIHTQKRNPATHLKDPDMFWDLLTLRPETIHQLLYLFGDRGIPDGYRHMNGYGSHTF 691
FP+FIH KRNP TH++DP+ +D RPE+IHQ+++L+ DRGIPDG+R MNGYG+HTF
Sbjct: 172 FPNFIHALKRNPQTHMRDPNALFDFWMNRPESIHQVMFLYSDRGIPDGFRFMNGYGAHTF 231
Query: 692 KLVNSQGVGYWVKFHY 739
K+VN +G + KFH+
Sbjct: 232 KMVNKEGNPIYCKFHF 247
Score = 75.8 bits (178), Expect = 3e-14
Identities = 39/82 (47%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 PHSKKGTYKMASRDP-ATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALL 189
PH T P A DQL Y+ ++ P +TT +GAP+ KTA+ T G+ GP L+
Sbjct: 5 PHMVNLTVNDTKPGPMAEDQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLM 63
Query: 190 QDVNFLDEMSSFDRERIPERVV 255
QD+ ++DEM+ FDRERIPERVV
Sbjct: 64 QDIVYMDEMAHFDRERIPERVV 85
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.091
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 55 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
P T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 34.3 bits (75), Expect = 0.091
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +1
Query: 55 PATDQLINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQDVNFLDEMSSFDR 231
P T Q +NY LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 451 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 362
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 451 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 362
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 451 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 362
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1070 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1099
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 451 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 362
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 1048 SSLPNATSSPQGASTISSAPVQQPSTSSVT 1077
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 451 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 362
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2227 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2256
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -1
Query: 451 SSV*NFTAKPRGSRTVSADPLSPPTVENLT 362
SS+ N T+ P+G+ T+S+ P+ P+ ++T
Sbjct: 2249 SSLPNATSSPQGASTISSAPVQQPSTSSVT 2278
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Frame = +1
Query: 70 LINYKKTLKDSPGFITTKSGAPVGIKTAIQTVGKNGPALLQ-----DVNF-LDEMSSFDR 231
L N+ K K SPG+ G ++ + + ++GP +L+ DV+F + EM+ FD+
Sbjct: 423 LTNFTKHGKPSPGWDPVDPGRMNYLELKVDSKARSGPVMLEGYHAKDVSFWVGEMTEFDQ 482
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,338,335
Number of Sequences: 27780
Number of extensions: 400568
Number of successful extensions: 1142
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1141
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -