Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30069
(495 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 3.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 3.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 3.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 3.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 3.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 3.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 3.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 3.1
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 22 4.1
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 21 9.5
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.5
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 3.1
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 5 NYKTYPNLFVNKKSNRYKYLWAYN 76
NY Y N N N YK L+ YN
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLY-YN 112
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = -1
Query: 291 EFAKLMLEQNTAATRTISISSLSHTLKIPSLKYSYNLWLGLL 166
E+ K + +++ I + + T I + Y Y+L++GLL
Sbjct: 93 EWKKNLNLRDSVTKYLIHLKEIEDTEPILLIAYIYHLYMGLL 134
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 215 NVWLNDEIEMVRV 253
N WL+ E M+RV
Sbjct: 342 NTWLDPEYPMIRV 354
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 20.6 bits (41), Expect = 9.5
Identities = 7/22 (31%), Positives = 11/22 (50%)
Frame = -3
Query: 427 YSILSCSKSCPRWCHWCRVLKI 362
Y IL+C+ W H +K+
Sbjct: 168 YDILNCTIHIASWSHGSNEIKL 189
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,671
Number of Sequences: 438
Number of extensions: 2791
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13667319
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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