Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30066
         (515 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   2.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   2.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   2.8  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   4.9  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.5  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   8.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   8.6  

>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 280 LTPGGSFLANIHVQ 239
           + PGG F  N H+Q
Sbjct: 43  IPPGGDFFGNHHIQ 56


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 280 LTPGGSFLANIHVQ 239
           + PGG F  N H+Q
Sbjct: 43  IPPGGDFFGNHHIQ 56


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 280 LTPGGSFLANIHVQ 239
           + PGG F  N H+Q
Sbjct: 43  IPPGGDFFGNHHIQ 56


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 280 LTPGGSFLANIHVQ 239
           + PGG F  N H+Q
Sbjct: 43  IPPGGDFFGNHHIQ 56


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 289  KPKAY*NSARIRPGKT 336
            KPK Y  SA + P KT
Sbjct: 1552 KPKGYLLSAAVSPSKT 1567


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +1

Query: 232 WYTEHGCW 255
           WY +HG W
Sbjct: 487 WYLDHGFW 494


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -1

Query: 299 ALGFRFINTRRKFSSQHPCSVYHLS 225
           +LGF    ++++F+ +   ++ HLS
Sbjct: 192 SLGFLLYASKKQFTFEETFAIIHLS 216


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 177 ALSSEYCPVFAAFITSVLTPDSLTHSE 97
           AL  +Y P   AF+ +   PDS+   E
Sbjct: 191 ALKIKYNPFAKAFLDAKERPDSIYQRE 217


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,555
Number of Sequences: 336
Number of extensions: 2304
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)