Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30063
         (477 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    26   0.59 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   0.78 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   5.5  
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           23   5.5  
AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           23   5.5  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.2  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.2 bits (55), Expect = 0.59
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 233 NLHERLYLGPLVDFILSHPLVHFPG 159
           NLH     G +V  I +H  VHFPG
Sbjct: 498 NLHRCKLCGKVVTHIRNHYHVHFPG 522


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 25.8 bits (54), Expect = 0.78
 Identities = 19/75 (25%), Positives = 33/75 (44%)
 Frame = +3

Query: 141 AGIDRYPRKVHKRMGKNKIHKRSKIKPFVKVVNYNHLMQHVIQLTSALKNSAQKT*KTLQ 320
           AGI     + +  +   ++ K   +K  +K   Y+ L+       S LKNS  K  K   
Sbjct: 333 AGILAKHDETYDALKAERVEKEKLVKEEIK--QYDELVSAKESKESTLKNSLDKFAKVQA 390

Query: 321 NVRSCVSTREYVLKR 365
           N+R+    R+  L++
Sbjct: 391 NMRATNERRKKTLEQ 405


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 16/41 (39%), Positives = 17/41 (41%)
 Frame = -3

Query: 151  SIPATKACPYGLSEVPSS*FLTTIALRPAYRPLKTSTTLPG 29
            + P T   PYGLS   SS  L      P   P     TLPG
Sbjct: 1115 AFPVTPRTPYGLSNGTSSPAL------PPKSPTSQRITLPG 1149


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 97  TTKVPPTSRTGMLSSLVSTGTPGKCT 174
           TT V PT+ T +  +  +T  PG+ T
Sbjct: 40  TTTVAPTTTTTVAPTTTTTVAPGQTT 65


>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 97  TTKVPPTSRTGMLSSLVSTGTPGKCT 174
           TT V PT+ T +  +  +T  PG+ T
Sbjct: 40  TTTVAPTTTTTVAPTTTTTVAPGQTT 65


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 147 IDRYPRKVHKRMGKNKIHKRS 209
           I+ Y   VH R G+N I  RS
Sbjct: 122 IEEYVTMVHNRFGRNPIVIRS 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 456,033
Number of Sequences: 2352
Number of extensions: 8446
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)