Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30062X
(523 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 102 4e-23
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 57 1e-09
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 44 2e-05
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 37 0.002
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 35 0.008
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 34 0.011
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 29 0.32
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 27 1.3
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 3.0
SPAP27G11.02 |||TPR repeat protein, unknown biological role|Schi... 25 5.2
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 25 5.2
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 25 6.8
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 25 9.0
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 25 9.0
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 9.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 102 bits (244), Expect = 4e-23
Identities = 52/84 (61%), Positives = 63/84 (75%), Gaps = 3/84 (3%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAGGQ---RYKGIVDAFVRIPKEQGLLSFWRGNF 427
AAVSKTA APIERVKLL+Q Q + I G+ RYKGI + F R E+G++S WRGN
Sbjct: 38 AAVSKTAAAPIERVKLLIQNQ--DEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNT 95
Query: 428 ANVIRYFPTQALNFGFKGKYKQVF 499
ANV+RYFPTQALNF FK K+K++F
Sbjct: 96 ANVLRYFPTQALNFAFKDKFKKMF 119
Score = 29.9 bits (64), Expect = 0.24
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 341 GGQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQVFL 502
GG+R + G+VD + + + GL +RG +V+ + L FG K V L
Sbjct: 170 GGERQFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVL 224
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 57.2 bits (132), Expect = 1e-09
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A VS+TAV+P+ER+K++ QVQ+ + Y + V+I +GL+ F+RGN N
Sbjct: 31 ATVSRTAVSPLERMKIIFQVQN-------NKEYTSLTSTLVKIWNREGLIGFFRGNGTNC 83
Query: 437 IRYFPTQALNFGFKGKYKQ 493
+R FP A+ F KQ
Sbjct: 84 LRAFPYGAVQFATFNMLKQ 102
Score = 33.9 bits (74), Expect = 0.015
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +2
Query: 251 YPAAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFA 430
+ + +T P + ++ QV + G YK I A I K +G+ F+RG +
Sbjct: 235 FTGIIGQTLTFPADVLRRRFQVNRIP---GIGHNYKNIKSAIFHIYKTEGINGFFRGYSS 291
Query: 431 NVIRYFPTQALNF 469
N+++ P ++ +
Sbjct: 292 NMLKIIPVMSITW 304
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 43.6 bits (98), Expect = 2e-05
Identities = 24/69 (34%), Positives = 37/69 (53%)
Frame = +2
Query: 263 VSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
V+K+ VAP++RVK+L Q H S + R+ G+ A I GL ++G+ A + R
Sbjct: 30 VAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHGLYQGHTATLYR 88
Query: 443 YFPTQALNF 469
FP + F
Sbjct: 89 VFPYAGIKF 97
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 37.1 bits (82), Expect = 0.002
Identities = 20/78 (25%), Positives = 40/78 (51%)
Frame = +2
Query: 263 VSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
VS+T AP++R+K++L + + + + ++ + G+ SF+ GN NV++
Sbjct: 140 VSRTCTAPLDRLKVML-ISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFVGNGINVLK 198
Query: 443 YFPTQALNFGFKGKYKQV 496
P ++ FG K+V
Sbjct: 199 VMPESSIKFGTYEAMKRV 216
Score = 35.9 bits (79), Expect = 0.004
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 272 TAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 451
T V P+ ++ LQ Q S A Y G +D F + K +G ++G N+++ P
Sbjct: 351 TIVFPLNVIRTRLQTQGTSAHPA---TYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAP 407
Query: 452 TQALNF 469
+ A+++
Sbjct: 408 SVAISY 413
Score = 30.7 bits (66), Expect = 0.14
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVR-IPKEQGLLSFWRGNFANV 436
+V++ + P++ +K +Q +S+ GQ K I+ + + + K G+ ++RG +
Sbjct: 240 SVAQMFIYPVDTLKFRIQCSDLSR----GQHGKSIILSNAKELYKSVGIRGYYRGVLVGI 295
Query: 437 IRYFPTQALNFG-FKG 481
+ FP A + G F+G
Sbjct: 296 LGMFPYSATDLGTFEG 311
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 34.7 bits (76), Expect = 0.008
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Frame = +2
Query: 251 YPAAVSKTAVAPIERVKLL--LQVQHVSKQIAGGQR-YKGIVDAFVRIPKEQGLLSFWRG 421
+P + AVA I V L L V Q++ G+ Y G D +I K +G +RG
Sbjct: 8 FPVTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRG 67
Query: 422 NFANVIRYFPTQALNFGFKGKYKQVFLAV 508
++ P +AL F Y +++ V
Sbjct: 68 ILPPILMEAPKRALKFASNDTYSKLWRKV 96
Score = 33.9 bits (74), Expect = 0.015
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 278 VAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
V P E +K+ LQ + +Y G VD F +I K++ +L+ + G A + R+
Sbjct: 122 VVPFELMKIRLQ------DVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWN 175
Query: 458 ALNFG 472
A FG
Sbjct: 176 AGYFG 180
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 34.3 bits (75), Expect = 0.011
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 326 SKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFG 472
S I G +Y G++ F + EQG++ + G A+++R P + FG
Sbjct: 303 SPSINGTPKYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFG 351
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.5 bits (63), Expect = 0.32
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +2
Query: 266 SKTAVAPIERVKLLLQVQHVSKQIAGGQRYK---GIVDAFVRIPKEQGLLSFWRGNFANV 436
S VAP++ VK Q Q GG+ G + + I +G+ +RG +
Sbjct: 19 SSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMM 78
Query: 437 IRYFPTQALNFGFKGKYKQVF 499
+ Y P+ ++ F K K +F
Sbjct: 79 LGYLPSWSIYFVVYEKCKVLF 99
Score = 27.9 bits (59), Expect = 0.97
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANV 436
Y DAF +I K +GL +F+RG F ++
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSL 257
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
PI+ VK +Q SK+ YK + +I + GLL FW G + R + +
Sbjct: 223 PIDTVKSRMQSLSASKE------YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGI 276
Query: 464 NFGFKGKYKQV 496
F K ++
Sbjct: 277 VFTVYEKVMEI 287
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 3.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 74 YEITPNLLFKNQELVFRDPPSACAATPTSTY 166
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAP27G11.02 |||TPR repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.4 bits (53), Expect = 5.2
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 271 DRRSTHRACQAAAPSTARQQADCRRPTLQGYRRCLRPYPQGAGA---PFILAW*LRQRHQ 441
D + +A Q+A ++ D P +QG R + AGA + + W + +R
Sbjct: 82 DFQDAWKAYQSAIKQAESEKMDMESPPVQGIRLQMANLLASAGALHKAWSMYWDILERTS 141
Query: 442 VLPD 453
LPD
Sbjct: 142 KLPD 145
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 25.4 bits (53), Expect = 5.2
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
+++ + + +GL F+RG + V Y PT
Sbjct: 119 VINTISTLARSEGLKGFYRGYWMGVAIYLPT 149
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 278 VAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRG 421
V P+E V++ LQ+Q K + Y G D +I + GL +G
Sbjct: 130 VGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQYGLSGIMKG 172
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 24.6 bits (51), Expect = 9.0
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 86 PNLLFKNQELVFRDPPSACAATPT 157
P + K E + RDPP A PT
Sbjct: 4 PKRIIKEIETLTRDPPPGIVAAPT 27
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 54 TLC--APVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLV 176
T+C AP + L ++C+K+ C + PR PR+ HL+
Sbjct: 551 TICNIAPFVENLSFVTCAKLMQLCSSLSSPRFLFRNPRN-HLL 592
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 24.6 bits (51), Expect = 9.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +2
Query: 401 LLSFWRGNFANVIRYFPTQALNFGFKGKYKQVFL 502
LLS WR +FA I Q N KG+ K+ L
Sbjct: 773 LLSSWRDDFAQYITNSIKQPPNSESKGQSKKTLL 806
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,116,715
Number of Sequences: 5004
Number of extensions: 42888
Number of successful extensions: 143
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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