Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30062X
(523 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 1e-19
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 1e-12
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 3e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 52 3e-07
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 4e-05
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 44 1e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 38 0.007
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 37 0.012
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 36 0.015
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 36 0.020
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.020
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 36 0.027
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 35 0.047
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 35 0.047
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.047
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.11
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.11
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.25
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.33
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.33
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.33
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 32 0.33
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.33
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.58
SB_50991| Best HMM Match : Mito_carr (HMM E-Value=2e-14) 31 0.58
SB_17604| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.58
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.76
SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16) 30 1.0
SB_26456| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.00011) 29 2.3
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 29 2.3
SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.4
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 5.4
SB_27857| Best HMM Match : Cadherin (HMM E-Value=0) 27 7.1
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 27 7.1
SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 27 7.1
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.1
SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044) 27 7.1
SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39) 27 9.4
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 93.5 bits (222), Expect = 1e-19
Identities = 47/82 (57%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
A +SKTA APIERVKLL+Q Q + K YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 434 VIRYFPTQALNFGFKGKYKQVF 499
IRYFPTQALNF FK + K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQVFL 502
+YKG +D ++I K++G +S +G AN++R + GF K+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
Score = 27.1 bits (57), Expect = 9.4
Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +2
Query: 341 GGQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQVFL 502
GG+R + G++D + + GL+ +RG + + + FG K + L
Sbjct: 151 GGERQFNGMIDVYKKTIASDGLVGLYRGFVISCVGIIVYRGFYFGLYDTLKPILL 205
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 70.1 bits (164), Expect = 1e-12
Identities = 33/78 (42%), Positives = 53/78 (67%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
AVS+T+V+P+ERVK+LLQ+Q ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 440 RYFPTQALNFGFKGKYKQ 493
R FP A+ F +YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 58.8 bits (136), Expect = 3e-09
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A VS+TA AP++R+K+LLQVQ S R+ GIV F + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQASSTN-----RF-GIVSGFKMMLREGGIKSLWRGNGANV 200
Query: 437 IRYFPTQALNFGFKGKYKQV 496
I+ P + F K K++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL 220
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/79 (26%), Positives = 42/79 (53%)
Frame = +2
Query: 266 SKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
S+T++ P+E +K L ++ GQ Y+G++ A I +++G+ SF+RG F +++
Sbjct: 244 SQTSIYPLEVLKTRLAIRKT------GQ-YRGLLHAASVIYQKEGIRSFYRGLFPSLLGI 296
Query: 446 FPTQALNFGFKGKYKQVFL 502
P ++ K +L
Sbjct: 297 IPYAGIDLAVYETLKNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQ-HVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWR 418
A +SKTA APIERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 4e-05
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYK-GIVDAFVRIPKEQGLLSFWRGNFAN 433
A ++++ +P+E VK+L QV G Q K G++ F + K +G+ +FW+GN +
Sbjct: 69 AVLARSLTSPLEVVKVLAQV--------GTQEAKPGLIRTFASVYKREGIKAFWKGNGVS 120
Query: 434 VIRYFPTQALNF 469
IR FP A+ +
Sbjct: 121 CIRLFPYSAVQY 132
Score = 39.9 bits (89), Expect = 0.001
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 263 VSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 443 YFP 451
FP
Sbjct: 222 LFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/65 (33%), Positives = 38/65 (58%)
Frame = +2
Query: 278 VAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
+AP++ VK+ LQ+Q +K+ Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKRSTRSV-YRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 458 ALNFG 472
A+ FG
Sbjct: 110 AVYFG 114
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +2
Query: 341 GGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
G RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 167 GKFRYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 37.5 bits (83), Expect = 0.007
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = +2
Query: 263 VSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRG 421
++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 36.7 bits (81), Expect = 0.012
Identities = 13/48 (27%), Positives = 28/48 (58%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQ 493
+Y G+ +I +++GL +++GN N++R P A+ F ++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 36.3 bits (80), Expect = 0.015
Identities = 13/41 (31%), Positives = 27/41 (65%)
Frame = +2
Query: 347 QRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
++Y G+++AF RI +++G+ +F+RG +I P ++F
Sbjct: 23 KKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISF 63
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 35.9 bits (79), Expect = 0.020
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +2
Query: 275 AVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
A P++ K +Q + I G YKG +D RI + +G+ + W+G R P
Sbjct: 110 ASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 455 QALNFGF 475
L F F
Sbjct: 167 TVLTFIF 173
Score = 35.5 bits (78), Expect = 0.027
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQVFLA 505
Y + +A R+ KE+G+L+ WRG +R A + KQ+ L+
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLLS 85
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 35.9 bits (79), Expect = 0.020
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +2
Query: 278 VAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 451
+ P++RVK +LQ++ + GG Y G VD RI +E G+ ++G +R P
Sbjct: 155 LTPLDRVKCILQIE----KAFGGSSYGGPVDCLRRIYREAGVRGVYKGISVTAMRDIP 208
Score = 27.9 bits (59), Expect = 5.4
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
P++ +K+ LQ + K YK D F +I + +G+ +RG ++ P +
Sbjct: 58 PLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYYLFRGVTVPILNSIPNTTV 116
Query: 464 NF 469
F
Sbjct: 117 LF 118
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 260 AVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A TAV PI+ VK +Q Q + + YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 440 RYFPTQAL 463
P +A+
Sbjct: 983 GVSPEKAI 990
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 35.5 bits (78), Expect = 0.027
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +2
Query: 263 VSKTAVAPIERVKLLLQVQ--HVSKQIAGG-QRYKGIVDAFVRIPKEQGLLSFWRG 421
+SK + P + +K +QVQ ++Q G Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 34.7 bits (76), Expect = 0.047
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQAL 463
PI+ K +QVQ + Q +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIPANGF 280
Query: 464 NFGF 475
FGF
Sbjct: 281 FFGF 284
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 34.7 bits (76), Expect = 0.047
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 281 APIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRG 421
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 34.7 bits (76), Expect = 0.047
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 278 VAPIERVKLLLQVQHVSKQIAGGQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
+ P E +K LQ QH + I+G K G++D ++I + G +RG A R P
Sbjct: 124 LCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVPG 183
Query: 455 QALNFG 472
FG
Sbjct: 184 YFFFFG 189
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQV 496
++ AF I + +GLL++++GN A ++R FP A+ F Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 33.5 bits (73), Expect = 0.11
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQ---HVSKQIAGGQR------YKGIVDAFVRIPKEQGLLS 409
A++++ A PI+ K+ LQ+Q V IA G R Y+G++ V + K +G+ +
Sbjct: 25 ASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGMLGTMVTLFKTEGMKT 84
Query: 410 FWRGNFANVIRYFPTQALNFGFKGKYKQVF 499
++G + R ++ G + K ++
Sbjct: 85 MYKGLIPGIHRQLCFASIRIGLYDQVKAMY 114
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.3 bits (70), Expect = 0.25
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 239 PGWRYPAAVSKTAVA-----PIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGL 403
P WR+ + + VA P++ V+ L VQ +S + Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 404 LSFWRGNFANVIRYFP 451
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 31.9 bits (69), Expect = 0.33
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +2
Query: 275 AVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPT 454
A+ PIE +K LQ+ G Y+G++ + KE+G+ +F+R + P
Sbjct: 14 AMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPF 65
Query: 455 QALNF 469
Q L+F
Sbjct: 66 QTLHF 70
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 31.9 bits (69), Expect = 0.33
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 365 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
+DA ++IP+ +GL S WRG ++ P + F
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYF 98
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAGGQR--YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
P++ +K+ LQ + Q+ G+ +KG +D F++ + +GL ++G + ++ P+
Sbjct: 40 PLDLLKVRLQAMN---QVKPGETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPST 96
Query: 458 ALNF 469
AL F
Sbjct: 97 ALTF 100
Score = 27.1 bits (57), Expect = 9.4
Identities = 19/54 (35%), Positives = 26/54 (48%)
Frame = +2
Query: 281 APIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
AP ER+K +LQV+ A G G RI E+G+ +RG +IR
Sbjct: 139 APAERIKCILQVE----AGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMIR 188
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 31.9 bits (69), Expect = 0.33
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 266 SKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
+ AV P++ +K LQ+ + + G Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 446 FP 451
P
Sbjct: 276 AP 277
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 31.9 bits (69), Expect = 0.33
Identities = 17/59 (28%), Positives = 27/59 (45%)
Frame = +2
Query: 284 PIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 460
P++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 377 PVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
Score = 28.3 bits (60), Expect = 4.1
Identities = 19/73 (26%), Positives = 31/73 (42%)
Frame = +2
Query: 254 PAAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
P ++KT V + + L+ V ++ Y G +D ++ +GL +RG
Sbjct: 264 PMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVFHSEGLRGCFRGMAIT 323
Query: 434 VIRYFPTQALNFG 472
R P AL FG
Sbjct: 324 TTRDIPAFALYFG 336
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 31.1 bits (67), Expect = 0.58
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 263 VSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRG 421
+ P + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 127 IGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
Score = 29.1 bits (62), Expect = 2.3
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Frame = +2
Query: 143 AATPTSTYSPSEDHI--IEQNVEPRRSGRVR*GLPGWRYPAAVSKTAVAPIERVKLLLQV 316
AA + T P+ DH + N E R G V L V+ +P++ V+
Sbjct: 183 AACISGTQIPTYDHTKHLLLNAELMREG-VALHLASALVAGFVATCVASPVDIVRTRFMT 241
Query: 317 QHVSKQIAGGQR-YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
Q K G Y+G +D + + +G+L+ ++G F N R
Sbjct: 242 Q--PKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFPNWTR 282
>SB_50991| Best HMM Match : Mito_carr (HMM E-Value=2e-14)
Length = 255
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A ++ + P ERV++LL + + +++ F I + ++RG +
Sbjct: 80 AGTAEAMLTPFERVQILLSHRDYN------EKFSNTAHVFKVIRTQYCFKEYYRGLTPIL 133
Query: 437 IRYFPTQALNFGFKGKYKQV 496
+R P+ L FG +G+ K+V
Sbjct: 134 MRNGPSNVLFFGLRGRIKEV 153
>SB_17604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 31.1 bits (67), Expect = 0.58
Identities = 19/80 (23%), Positives = 38/80 (47%)
Frame = +2
Query: 257 AAVSKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A ++ + P ERV++LL + + +++ F I + ++RG +
Sbjct: 119 AGTAEAMLTPFERVQILLSHRDYN------EKFSNTAHVFKVIRTQYCFKEYYRGLTPIL 172
Query: 437 IRYFPTQALNFGFKGKYKQV 496
+R P+ L FG +G+ K+V
Sbjct: 173 MRNGPSNVLFFGLRGRIKEV 192
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 30.7 bits (66), Expect = 0.76
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQV 496
+P+E L W G F++VI F A+N F+ +YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_23424| Best HMM Match : Ank (HMM E-Value=1.1e-16)
Length = 494
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 232 RTSWLAVSRRRLQDRRSTHRACQAAAPSTARQQADCRRPTL 354
+T+ +AV L RRS +A P+T R+ + RPTL
Sbjct: 337 KTAKIAVKTNNLLRRRSVAVTAPSAKPNTTRRMSTASRPTL 377
>SB_26456| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.00011)
Length = 343
Score = 29.1 bits (62), Expect = 2.3
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = -1
Query: 520 VFLSHREEHLLVLAFKAEVERLGREVPDDVG 428
+ L H ++ ++LAF ++ER +E+ D++G
Sbjct: 178 IMLEHDVQYAVILAFDVKIEREAQELADNLG 208
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 29.1 bits (62), Expect = 2.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -1
Query: 253 IPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 125
+PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 540 LPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_34624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 392
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +2
Query: 239 PGWRYPAAVSKTAVAPIERVK 301
P W P+++++ AVAPI RV+
Sbjct: 221 PNWAPPSSITRPAVAPITRVR 241
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQV 496
+P+E +L W G ++VI F A+N F+ +YK++
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL 176
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 28.3 bits (60), Expect = 4.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 253 IPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 125
+PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1267 LPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_39421| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1810
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = +2
Query: 125 DPPSACAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGWRYPAAVSKTAVAPIERVKL 304
D PS P YS ++ + E +RS R + + P S VAP+E V
Sbjct: 493 DAPSESVPLPQHQYSLPDERL-RPFTEDQRSSNAR--IARMQDPNTSSGVPVAPVEEVYP 549
Query: 305 LLQVQHVSKQ 334
+H+S Q
Sbjct: 550 AHDAKHISSQ 559
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/56 (37%), Positives = 26/56 (46%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHRACQAAAPSTARQQADCRRPTLQ 357
RT+ R + R R + V+RRR DRR T A T R+Q D RR Q
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRRRTR------ARVTRRRQVDRRRTRAQ 164
Score = 27.5 bits (58), Expect = 7.1
Identities = 22/60 (36%), Positives = 28/60 (46%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSTHRACQAAAPSTARQQADCRRPTLQGYRR 369
RT+ R + R R + V+ RR DRR T A T+R+Q D RR Q RR
Sbjct: 85 RTRARVTSRRQVDRRRTRARVTIRRQVDRRRTR------ARVTSRRQVDRRRTRAQVTRR 138
>SB_13696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 676
Score = 27.9 bits (59), Expect = 5.4
Identities = 30/83 (36%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Frame = +2
Query: 110 ELVFRDPPSA----CAATPTSTYSPSEDHIIEQNVEPRRSGRVR*GLPGWRYPAAVSK-T 274
E + RDP + A+P S I EQNVE S + G+ G PA K T
Sbjct: 269 EALTRDPKESDTNVSRASPDSHLQTVISEIREQNVELVESSPIEAGVDG-ETPAPDEKST 327
Query: 275 AVAPIERVKLLLQVQHVSK-QIA 340
VAPI V LQ + ++ QIA
Sbjct: 328 DVAPISEVADALQEKEENEPQIA 350
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 5.4
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 32 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 175
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_27857| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2418
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
Frame = +2
Query: 80 ITPN----LLFKNQELVFRDPPSACAATPTSTYSPSEDHII 190
+TPN LL + + R+P SA S YSPSE I+
Sbjct: 963 LTPNVRYQLLIRASDSATRNPSSAQVPVYVSVYSPSESPIV 1003
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 27.5 bits (58), Expect = 7.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 266 SKTAVAPIERVKLLLQVQHVSKQIAGGQRYKGIVDAFVRIPKEQGLLSFWRGN 424
S+ VA ER +L+ Q Q RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_25592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -1
Query: 499 EHLLVLAFKAEVERLGREVPDDVGEVTTPE*KEPLLLGD 383
+ LL E +R+G+ + + G +TTPE K+ L GD
Sbjct: 96 QRLLNTGTSGERQRVGQHLEQNEGWITTPELKDLLDSGD 134
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 27.5 bits (58), Expect = 7.1
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 359 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQV 496
G+V + G +RGN A ++R P ++ F +YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 27.5 bits (58), Expect = 7.1
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 386 PKEQGLLSFWRGNFANVIRYFPTQALNFGFKGKYKQVFLAV 508
P+E L W G ++VI F +N F+ ++K+++L V
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYLRV 855
>SB_154| Best HMM Match : RVT_1 (HMM E-Value=0.00044)
Length = 1170
Score = 27.5 bits (58), Expect = 7.1
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 59 LCSRDYEITPNLLFKN---QELVFRDPPSACAATPTSTYSPSED 181
LC +D E++P LLF N +++ R P A P++ S ED
Sbjct: 54 LCGKDQEVSPKLLFGNDLAKQVRDRKKPPVW-ANPSAPQSAKED 96
>SB_54542| Best HMM Match : Ribosomal_60s (HMM E-Value=0.39)
Length = 1037
Score = 27.1 bits (57), Expect = 9.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 205 TSPIRSRSLRTSWLAVSRRRLQDRRSTHRACQAAAPSTARQQADCRRPTLQGYRRC 372
TSP+ SRS + ++ ++R ++ R C AAA + ++A T RRC
Sbjct: 778 TSPLTSRSRKALGKVEPNQQSEERGASCRRCAAAAGNPGAERA--AAGTALARRRC 831
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,919,660
Number of Sequences: 59808
Number of extensions: 367453
Number of successful extensions: 1301
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 1177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1295
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1172759136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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