Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30057
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein. 80 7e-15
BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine methyl... 80 7e-15
AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransfera... 80 7e-15
AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein. 80 7e-15
AK027737-1|BAB55331.1| 154|Homo sapiens protein ( Homo sapiens ... 51 5e-06
AY150218-1|AAN60219.1| 528|Homo sapiens peripherial benzodiazep... 30 7.7
>CR456741-1|CAG33022.1| 637|Homo sapiens SKB1 protein.
Length = 637
Score = 80.2 bits (189), Expect = 7e-15
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IIVSELLGSWGDNELSPECLDGASNLLKPGGISIPSSYRSYVAPITSPRLWAAAKIATSG 182
IIVSELLGS+ DNELSPECLDGA + LK G+SIP Y S++API+S +L+ + A
Sbjct: 431 IIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVR-ACRE 489
Query: 183 IPQQKDKNLETLWVVYMQNKHDIA 254
+ + E +VV + N H ++
Sbjct: 490 KDRDPEAQFEMPYVVRLHNFHQLS 513
Score = 72.5 bits (170), Expect = 1e-12
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 341 PLTNNRRQATLTWDVQQDNIMHGFGGYFDCTLYGNEMISIVPGTHSPGMISWFPVFFQLR 520
P+ +N R TL + V+ + ++HGF GYF+ LY + +SI P THSPGM SWFP+ F ++
Sbjct: 528 PMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQDITLSIRPETHSPGMFSWFPILFPIK 587
Score = 60.1 bits (139), Expect = 8e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 505 LFPIKTPMRVQKGDKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNANGRS 657
LFPIK P+ V++G I FWRC +S++VWYEW V S +HN GRS
Sbjct: 583 LFPIKQPITVREGQTICVRFWRCSNSKKVWYEWAVTAPVCSA-IHNPTGRS 632
>BC025979-1|AAH25979.1| 637|Homo sapiens protein arginine
methyltransferase 5 protein.
Length = 637
Score = 80.2 bits (189), Expect = 7e-15
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IIVSELLGSWGDNELSPECLDGASNLLKPGGISIPSSYRSYVAPITSPRLWAAAKIATSG 182
IIVSELLGS+ DNELSPECLDGA + LK G+SIP Y S++API+S +L+ + A
Sbjct: 431 IIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVR-ACRE 489
Query: 183 IPQQKDKNLETLWVVYMQNKHDIA 254
+ + E +VV + N H ++
Sbjct: 490 KDRDPEAQFEMPYVVRLHNFHQLS 513
Score = 72.5 bits (170), Expect = 1e-12
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 341 PLTNNRRQATLTWDVQQDNIMHGFGGYFDCTLYGNEMISIVPGTHSPGMISWFPVFFQLR 520
P+ +N R TL + V+ + ++HGF GYF+ LY + +SI P THSPGM SWFP+ F ++
Sbjct: 528 PMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQDITLSIRPETHSPGMFSWFPILFPIK 587
Score = 60.1 bits (139), Expect = 8e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 505 LFPIKTPMRVQKGDKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNANGRS 657
LFPIK P+ V++G I FWRC +S++VWYEW V S +HN GRS
Sbjct: 583 LFPIKQPITVREGQTICVRFWRCSNSKKVWYEWAVTAPVCSA-IHNPTGRS 632
>AF167572-1|AAF04502.1| 637|Homo sapiens protein methyltransferase
protein.
Length = 637
Score = 80.2 bits (189), Expect = 7e-15
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IIVSELLGSWGDNELSPECLDGASNLLKPGGISIPSSYRSYVAPITSPRLWAAAKIATSG 182
IIVSELLGS+ DNELSPECLDGA + LK G+SIP Y S++API+S +L+ + A
Sbjct: 431 IIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVR-ACRE 489
Query: 183 IPQQKDKNLETLWVVYMQNKHDIA 254
+ + E +VV + N H ++
Sbjct: 490 KDRDPEAQFEMPYVVRLHNFHQLS 513
Score = 72.5 bits (170), Expect = 1e-12
Identities = 28/60 (46%), Positives = 41/60 (68%)
Frame = +2
Query: 341 PLTNNRRQATLTWDVQQDNIMHGFGGYFDCTLYGNEMISIVPGTHSPGMISWFPVFFQLR 520
P+ +N R TL + V+ + ++HGF GYF+ LY + +SI P THSPGM SWFP+ F ++
Sbjct: 528 PMIDNNRYCTLEFPVEVNTVLHGFAGYFETVLYQDITLSIRPETHSPGMFSWFPILFPIK 587
Score = 60.1 bits (139), Expect = 8e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 505 LFPIKTPMRVQKGDKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNANGRS 657
LFPIK P+ V++G I FWRC +S++VWYEW V S +HN GRS
Sbjct: 583 LFPIKQPITVREGQTICVRFWRCSNSKKVWYEWAVTAPVCSA-IHNPTGRS 632
>AF015913-1|AAB66581.1| 637|Homo sapiens Skb1Hs protein.
Length = 637
Score = 80.2 bits (189), Expect = 7e-15
Identities = 40/84 (47%), Positives = 55/84 (65%)
Frame = +3
Query: 3 IIVSELLGSWGDNELSPECLDGASNLLKPGGISIPSSYRSYVAPITSPRLWAAAKIATSG 182
IIVSELLGS+ DNELSPECLDGA + LK G+SIP Y S++API+S +L+ + A
Sbjct: 431 IIVSELLGSFADNELSPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYNEVR-ACRE 489
Query: 183 IPQQKDKNLETLWVVYMQNKHDIA 254
+ + E +VV + N H ++
Sbjct: 490 KDRDPEAQFEMPYVVRLHNFHQLS 513
Score = 68.9 bits (161), Expect = 2e-11
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +2
Query: 341 PLTNNRRQATLTWDVQQDNIMHGFGGYFDCTLYGNEMISIVPGTHSPGMISWFPVFFQLR 520
P+ +N R TL + V+ + ++HGF YF+ LY + +SI P THSPGM SWFP+ F ++
Sbjct: 528 PMIDNNRYCTLEFPVEVNTVLHGFAVYFETVLYQDITLSIRPETHSPGMFSWFPILFPIK 587
Score = 60.1 bits (139), Expect = 8e-09
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 505 LFPIKTPMRVQKGDKITATFWRCVDSRRVWYEWVVEVGNRSTPLHNANGRS 657
LFPIK P+ V++G I FWRC +S++VWYEW V S +HN GRS
Sbjct: 583 LFPIKQPITVREGQTICVRFWRCSNSKKVWYEWAVTAPVCSA-IHNPTGRS 632
>AK027737-1|BAB55331.1| 154|Homo sapiens protein ( Homo sapiens
cDNA FLJ14831 fis, clone OVARC1001107, highly similar to
Homo sapiens protein methyltransferase (JBP1) mRNA. ).
Length = 154
Score = 50.8 bits (116), Expect = 5e-06
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +3
Query: 3 IIVSELLGSWGDNELSPECLDGASNLLK 86
IIVSELLGS+ DNELSPECLDGA + LK
Sbjct: 116 IIVSELLGSFADNELSPECLDGAQHFLK 143
>AY150218-1|AAN60219.1| 528|Homo sapiens peripherial benzodiazepine
receptor associated protein protein.
Length = 528
Score = 30.3 bits (65), Expect = 7.7
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Frame = +2
Query: 299 KDEEGCDKSDYRG------LPLTNNRRQATLTWDVQQDNIMHGFGGYFDCTLYGNEMISI 460
+D GC DY G + + + + L W+ DN GFG YF+ T N +S+
Sbjct: 386 EDSAGCRFRDYSGRGEVVTVRVPTHEEGSYLFWEFATDNCDIGFGVYFEWTDSPNTAVSV 445
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,804,794
Number of Sequences: 237096
Number of extensions: 2960292
Number of successful extensions: 5492
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5492
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -