SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30055
         (766 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX005133-4|CAM25849.1|  307|Homo sapiens olfactory receptor fami...    31   3.4  
BC101746-1|AAI01747.1|  307|Homo sapiens olfactory receptor, fam...    31   4.5  
BC101742-1|AAI01743.1|  307|Homo sapiens olfactory receptor, fam...    31   4.5  
BC069123-1|AAH69123.1|  307|Homo sapiens olfactory receptor, fam...    31   4.5  
AL662869-1|CAI17482.1|  307|Homo sapiens olfactory receptor, fam...    31   4.5  
AL645927-1|CAI18051.1|  307|Homo sapiens olfactory receptor, fam...    31   4.5  
AL035542-1|CAB44510.1|  307|Homo sapiens olfactory receptor, fam...    31   4.5  

>BX005133-4|CAM25849.1|  307|Homo sapiens olfactory receptor family
           12 subfamily D member 2 protein.
          Length = 307

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSIMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


>BC101746-1|AAI01747.1|  307|Homo sapiens olfactory receptor, family
           12, subfamily D, member 2 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


>BC101742-1|AAI01743.1|  307|Homo sapiens olfactory receptor, family
           12, subfamily D, member 2 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


>BC069123-1|AAH69123.1|  307|Homo sapiens olfactory receptor, family
           12, subfamily D, member 2 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


>AL662869-1|CAI17482.1|  307|Homo sapiens olfactory receptor, family
           12, subfamily D, member 2 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


>AL645927-1|CAI18051.1|  307|Homo sapiens olfactory receptor, family
           12, subfamily D, member 2 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


>AL035542-1|CAB44510.1|  307|Homo sapiens olfactory receptor, family
           12, subfamily D, member 2 protein.
          Length = 307

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
 Frame = -2

Query: 747 VLGLRKCTELRISVLS---FHVHLYNLPLSLK--CFSNRFHYFFLSLNPSLFGLRCNLQF 583
           ++  + CT++ I++     FH  L+++  S    C SNR H+F   + P L  L C    
Sbjct: 133 IMNPQLCTQMAITIWVIGFFHALLHSVMTSRLNFCGSNRIHHFLCDIKP-LLKLACGNTE 191

Query: 582 RNCWL 568
            N WL
Sbjct: 192 LNQWL 196


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,114,489
Number of Sequences: 237096
Number of extensions: 683984
Number of successful extensions: 1629
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1629
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -