Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30053
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    39   0.16 
UniRef50_Q8ILU2 Cluster: Putative uncharacterized protein; n=2; ...    36   1.1  
UniRef50_Q9VE69 Cluster: CG31122-PA; n=3; Sophophora|Rep: CG3112...    34   3.4  
UniRef50_A7SFT5 Cluster: Predicted protein; n=1; Nematostella ve...    34   4.4  
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    33   5.9  
UniRef50_Q5Z6B6 Cluster: NAC domain-containing protein 76; n=11;...    33   7.8  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 38.7 bits (86), Expect = 0.16
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 457  GRQRLGSAPGIAGVHGRR 510
            GRQRLGSAPGIA VHGRR
Sbjct: 969  GRQRLGSAPGIAEVHGRR 986


>UniRef50_Q8ILU2 Cluster: Putative uncharacterized protein; n=2;
            Plasmodium|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1474

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = -2

Query: 544  NEHTAHLMVSGHVAHGLQQCQGQSQAAAYHHPILGGVHSHHNRMPHPHFRDTSSN 380
            N+H  H +      H  QQ Q Q Q   +HHP     H+H ++M H + ++TS N
Sbjct: 1243 NQHQHHHLHPHQHHHHQQQQQQQQQQQTHHHPHTH-THTHTHQMYHDNRKNTSIN 1296


>UniRef50_Q9VE69 Cluster: CG31122-PA; n=3; Sophophora|Rep:
           CG31122-PA - Drosophila melanogaster (Fruit fly)
          Length = 642

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -2

Query: 535 TAHLMVSGHVAH-GLQQCQGQSQAAAYHHPILGGVHSHHNRMPHPH 401
           +A L+ S H +H   QQ Q   QA  +HHP     H HH    H H
Sbjct: 572 SASLVNSHHHSHMQQQQTQQPPQARHHHHPATSHRHHHHQHHSHHH 617


>UniRef50_A7SFT5 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 226

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +3

Query: 435 TPPRIGWW*AAAWLCPWH--CW-SPWAT*PLTIRW 530
           TPP +  W   AW+ PWH   W  PW T P  I W
Sbjct: 184 TPPWVIPWHRPAWVIPWHRPPWVIPWHTPPWVIPW 218



 Score = 33.1 bits (72), Expect = 7.8
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 435 TPPRIGWW*AAAWLCPWHC--W-SPWAT*PLTIRW 530
           TPP +  W    W+ PWH   W  PW T P  I W
Sbjct: 73  TPPWVIPWHTPPWVIPWHTPPWVIPWHTPPWVIPW 107


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 502 GRRDHSPSGGPYARLPTRAIKK 567
           G  +HSPSG PYA LPTRA  K
Sbjct: 2   GDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_Q5Z6B6 Cluster: NAC domain-containing protein 76; n=11;
           Magnoliophyta|Rep: NAC domain-containing protein 76 -
           Oryza sativa subsp. japonica (Rice)
          Length = 276

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = -2

Query: 511 HVAHGLQQCQGQSQAAAYHHPILGGVHSHHNRMPHPHFRDTSS 383
           H  H     Q    AA + H   GG H HH   PH H+ D  S
Sbjct: 182 HHHHPFPPAQLHGGAADHKHDGAGGHHHHHLMQPHHHYDDFPS 224


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 734,182,071
Number of Sequences: 1657284
Number of extensions: 14901879
Number of successful extensions: 40265
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 38065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40142
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)