Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30052
         (748 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    95   1e-18
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    45   0.002
UniRef50_A5C462 Cluster: Putative uncharacterized protein; n=6; ...    34   4.3  
UniRef50_Q6CJ23 Cluster: Kluyveromyces lactis strain NRRL Y-1140...    33   7.5  

>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 95.5 bits (227), Expect = 1e-18
 Identities = 43/51 (84%), Positives = 47/51 (92%)
 Frame = -2

Query: 408 FYLLLADPADFVVP*SINKRPKLLFKINLKQTQGIRPTGDTSKEKQNCYFY 256
           F ++LADPADFVVP SINKRPK L+KINLKQT+GIR TGDTSKEKQNCYFY
Sbjct: 18  FMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQNCYFY 68


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 21/26 (80%), Positives = 22/26 (84%)
 Frame = +3

Query: 147 LKLTKGWTELANFGLELFVEVQRRLK 224
           LKL  GWT+LANFGLEL VEVQR LK
Sbjct: 20  LKLENGWTDLANFGLELPVEVQRGLK 45


>UniRef50_A5C462 Cluster: Putative uncharacterized protein; n=6;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 998

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +3

Query: 135 SLVSLKLTKGWTELANFGLELFVEVQRRLKRWINMK 242
           SL + K TKGW E A+       +  +++K+W++ K
Sbjct: 880 SLTTFKFTKGWHEQADIAXSYLDKATKKMKKWVDKK 915


>UniRef50_Q6CJ23 Cluster: Kluyveromyces lactis strain NRRL Y-1140
           chromosome F of strain NRRL Y- 1140 of Kluyveromyces
           lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
           lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
           1140 of Kluyveromyces lactis - Kluyveromyces lactis
           (Yeast) (Candida sphaerica)
          Length = 558

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
 Frame = -1

Query: 190 RPKLANSVQPFVSFSETNEQQFIFIYNNLILAYRGFSL-IQFSLTQV*LYIEEEDRRL 20
           R  +ANS Q  V+ ++++  Q +FI++  + +Y   SL IQ S+    +Y+E  DR L
Sbjct: 274 RVSIANSEQEAVNLTDSSFLQPVFIHSRYLYSYLPLSLIIQVSIQTNAVYVESLDRWL 331


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,310,072
Number of Sequences: 1657284
Number of extensions: 12459693
Number of successful extensions: 26817
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26807
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)