Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30052
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.85 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   6.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 745 FTQSFVISDLLWLFTGLRYILVFIYFFIAIRLTKLTVHLVL 623
           F  +F+I  +  LF  +  IL+ IY+F        TVHL+L
Sbjct: 215 FYSAFIIFTIHLLFYCVLIILLCIYYFY-YAFILFTVHLLL 254


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -3

Query: 284 QRKNKIVIFINSEHFHIYPPFKPSLDFH 201
           QR   +V FIN + F  +   +P  D H
Sbjct: 351 QRLGSLVDFINLQAFDFHREREPVADHH 378


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +3

Query: 168 TELANFGLELFVEVQRRLKRWINMKMLGINKNNNFVFPLMCPPSDG 305
           +E+  F ++LF   ++  +RW N     ++ N+ FV     P   G
Sbjct: 164 SEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPG 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,749
Number of Sequences: 336
Number of extensions: 3408
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)