Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30051
         (291 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   1.3  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    21   4.1  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    20   5.4  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    20   5.4  
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    20   5.4  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   7.1  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    20   7.1  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    19   9.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 1.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 140 SQNASRETGNHNTSGAAADDA 202
           S N +  +GN NT+ +A D +
Sbjct: 535 SSNVNNNSGNGNTNSSARDSS 555


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +2

Query: 140 SQNASRETGNHNTSGAAADDAETDLKSN 223
           +QNA+++ GN        D+ +   + N
Sbjct: 449 NQNANKQNGNRQNDNRQNDNKQNGNRQN 476


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 134 LVSQNASRETGNHNTSGAAADDAE 205
           LV+++ +R    H T+ A  DD +
Sbjct: 37  LVAEDKARCMSEHGTTQAQIDDVD 60


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 134 LVSQNASRETGNHNTSGAAADDAE 205
           LV+++ +R    H T+ A  DD +
Sbjct: 37  LVAEDKARCMSEHGTTQAQIDDVD 60


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 82  REPVQRCVDVSSCGV 126
           +EP  + VD+ +CGV
Sbjct: 86  KEPYGKPVDIWACGV 100


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/17 (29%), Positives = 12/17 (70%)
 Frame = -1

Query: 180 LVLWFPVSLLAFCETSV 130
           ++ WFP+ ++ +  TS+
Sbjct: 211 MMYWFPLVVIIYTYTSI 227


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 286 FFFFYLLVYSAIIFYSF 236
           F  F LLV  A+  Y+F
Sbjct: 87  FLLFILLVQIAVAVYAF 103


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 65  NTIDEFENLYKDVSTS 112
           +++DE    YKD S+S
Sbjct: 327 SSLDEIRTRYKDSSSS 342


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,823
Number of Sequences: 438
Number of extensions: 744
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)