Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30047
         (629 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3I0E2 Cluster: Putative uncharacterized protein; n=1; ...    34   3.2  
UniRef50_Q8EW07 Cluster: Putative uncharacterized protein MYPE39...    33   7.5  

>UniRef50_A3I0E2 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 191

 Score = 33.9 bits (74), Expect = 3.2
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = -3

Query: 450 VKNLFDEFEN*RLMIHVGISVNMYLLY-LLNSNTKTILF 337
           +K+ F++FE   L I VGISV +   Y L NS  +TI+F
Sbjct: 39  IKSYFNDFEIDWLFIIVGISVGLIFFYWLTNSRNRTIIF 77


>UniRef50_Q8EW07 Cluster: Putative uncharacterized protein MYPE3990;
           n=1; Mycoplasma penetrans|Rep: Putative uncharacterized
           protein MYPE3990 - Mycoplasma penetrans
          Length = 885

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = -3

Query: 381 YLLYLLNSNTKTILFPVSLQSYVCSIGR*SLKFTISAILQNFYF-VRKT*NT*IFKYDCY 205
           YL+ L N+++ T  F ++ QS+    G+ S    I A  QNFYF + K  N     ++  
Sbjct: 159 YLVKLTNNSSTTTSFNINNQSFYIPAGK-SKTLEIKADNQNFYFGITKNYNNYYLNWNTN 217

Query: 204 YTLKTSNISF-FNYFMFS 154
            T K  +  + F  F F+
Sbjct: 218 VTFKFDDQEYLFESFSFT 235


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,988,036
Number of Sequences: 1657284
Number of extensions: 9624106
Number of successful extensions: 19370
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18572
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19359
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)