Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30046
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 144 6e-35
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 144 6e-35
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 144 6e-35
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 144 6e-35
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 85 6e-17
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 72 5e-13
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 54 8e-08
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 49 3e-06
At1g35550.1 68414.m04414 elongation factor Tu C-terminal domain-... 33 0.16
At2g31060.1 68415.m03790 elongation factor family protein contai... 33 0.27
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.1
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 30 1.9
At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329... 30 1.9
At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329... 30 1.9
At3g16310.1 68416.m02059 mitotic phosphoprotein N' end (MPPN) fa... 29 4.5
At2g39560.1 68415.m04853 expressed protein 29 4.5
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.9
At5g38140.1 68418.m04596 histone-like transcription factor (CBF/... 28 7.8
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 7.8
At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger) fa... 28 7.8
At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family pr... 28 7.8
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.8
At1g19430.1 68414.m02421 dehydration-responsive protein-related ... 28 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 144 bits (349), Expect = 6e-35
Identities = 63/83 (75%), Positives = 76/83 (91%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 691
FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 692 FTAQVIVLNHPGQISNGYTPVLD 760
FT+QVI++NHPGQI NGY PVLD
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLD 350
Score = 130 bits (315), Expect = 7e-31
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPAAVAFVPI 255
EI KEVSSY+KK+GYNP + FVPI
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPI 193
Score = 109 bits (262), Expect = 2e-24
Identities = 54/89 (60%), Positives = 64/89 (71%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKAWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 434
SG+ GDNM+E ST + W+K G L+EALD I P RP+DKPLRLPLQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETG++KPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 144 bits (349), Expect = 6e-35
Identities = 63/83 (75%), Positives = 76/83 (91%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 691
FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 692 FTAQVIVLNHPGQISNGYTPVLD 760
FT+QVI++NHPGQI NGY PVLD
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLD 350
Score = 130 bits (315), Expect = 7e-31
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPAAVAFVPI 255
EI KEVSSY+KK+GYNP + FVPI
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPI 193
Score = 109 bits (262), Expect = 2e-24
Identities = 54/89 (60%), Positives = 64/89 (71%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKAWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 434
SG+ GDNM+E ST + W+K G L+EALD I P RP+DKPLRLPLQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETG++KPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 144 bits (349), Expect = 6e-35
Identities = 63/83 (75%), Positives = 76/83 (91%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 691
FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 692 FTAQVIVLNHPGQISNGYTPVLD 760
FT+QVI++NHPGQI NGY PVLD
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLD 350
Score = 130 bits (315), Expect = 7e-31
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPAAVAFVPI 255
EI KEVSSY+KK+GYNP + FVPI
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPI 193
Score = 109 bits (262), Expect = 2e-24
Identities = 54/89 (60%), Positives = 64/89 (71%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKAWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 434
SG+ GDNM+E ST + W+K G L+EALD I P RP+DKPLRLPLQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETG++KPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 144 bits (349), Expect = 6e-35
Identities = 63/83 (75%), Positives = 76/83 (91%)
Frame = +2
Query: 512 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 691
FAP +TTEVKSVEMHHE+L EA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P KGAA+
Sbjct: 268 FAPTGLTTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAAN 327
Query: 692 FTAQVIVLNHPGQISNGYTPVLD 760
FT+QVI++NHPGQI NGY PVLD
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLD 350
Score = 130 bits (315), Expect = 7e-31
Identities = 61/85 (71%), Positives = 72/85 (84%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
ADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+ R++
Sbjct: 109 ADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYD 168
Query: 181 EIKKEVSSYIKKIGYNPAAVAFVPI 255
EI KEVSSY+KK+GYNP + FVPI
Sbjct: 169 EIIKEVSSYLKKVGYNPDKIPFVPI 193
Score = 109 bits (262), Expect = 2e-24
Identities = 54/89 (60%), Positives = 64/89 (71%)
Frame = +3
Query: 255 SGWHGDNMLEPSTKMPWFKAWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDV 434
SG+ GDNM+E ST + W+K G L+EALD I P RP+DKPLRLPLQDV
Sbjct: 194 SGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDKPLRLPLQDV 241
Query: 435 YKIGGIGTVPVGRVETGVLKPGTIVSLPP 521
YKIGGIGTVPVGRVETG++KPG +V+ P
Sbjct: 242 YKIGGIGTVPVGRVETGMIKPGMVVTFAP 270
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 84.6 bits (200), Expect = 6e-17
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE 180
AD VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R++
Sbjct: 203 ADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYD 262
Query: 181 EIKKEVSSYIKKIGYNPAA-VAFVPI 255
EI++++ ++K GYN V F+PI
Sbjct: 263 EIEQKMVPFLKASGYNTKKDVVFLPI 288
Score = 41.5 bits (93), Expect = 6e-04
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +3
Query: 348 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG-TIVSLP 518
G E LD+I P R + P R+P+ D +K +GTV +G+VE+G ++ G ++V +P
Sbjct: 310 GPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMP 365
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/69 (23%), Positives = 33/69 (47%)
Frame = +2
Query: 509 VFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAA 688
V P +V ++ + ++ A PG+N+ + + +++ G+V S NP
Sbjct: 362 VVMPNKEQVKVVAIYCDEDKVKRAGPGENLRVRITGIEDEDILSGFVL-SSIVNPVPAVT 420
Query: 689 DFTAQVIVL 715
+F AQ+ +L
Sbjct: 421 EFVAQLQIL 429
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 177
AD A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD YS+ RF
Sbjct: 341 ADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERF 398
Query: 178 EEIKKEVSSYIKKIGYNPAAVAFVPI 255
+ IK+ V S+++ + +++ ++P+
Sbjct: 399 DLIKQHVGSFLQSCRFKDSSLTWIPL 424
Score = 46.4 bits (105), Expect = 2e-05
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 348 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVSLPP 521
G CL++A+D++ P R KPL +P+ D + G V G++E G ++PG+ V + P
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMP 505
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 54.4 bits (125), Expect = 8e-08
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +3
Query: 357 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVSL 515
L++A+D +P P R DKP +P++DV+ I G GTV GR+E GV+K G V +
Sbjct: 249 LMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEI 302
Score = 33.9 bits (74), Expect = 0.12
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +1
Query: 70 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 213
QT+EH LLA +GV L+ +NK+D + P E +E+ S+ K
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +2
Query: 527 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 706
+ + V VEM + L GDNVG ++ + ++++RG V +K K F A++
Sbjct: 312 LKSTVTGVEMFKKILDNGQAGDNVGLLLRGLKREDIQRGMVI--AKPGSCKTYKKFEAEI 369
Query: 707 IVL 715
VL
Sbjct: 370 YVL 372
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 49.2 bits (112), Expect = 3e-06
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = +3
Query: 357 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVSL 515
L++A+D +P P R T+ P L ++DV+ I G GTV GRVE G +K G V L
Sbjct: 269 LMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDL 322
Score = 34.7 bits (76), Expect = 0.068
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 539 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYV 649
V VEM + L EA+ GDNVG ++ + +++RG V
Sbjct: 333 VTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMV 369
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 4 DCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFE- 180
D A+L+V+ G QT+EH LLA +GV ++V +NK D + E
Sbjct: 167 DGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVEL 219
Query: 181 EIKKEVSSY 207
E+++ +SSY
Sbjct: 220 EVRELLSSY 228
>At1g35550.1 68414.m04414 elongation factor Tu C-terminal
domain-containing protein similar to SP|P13905
Elongation factor 1-alpha (EF-1-alpha) {Arabidopsis
thaliana}; contains Pfam profile PF03143: Elongation
factor Tu C-terminal domain
Length = 104
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2
Query: 713 LNHPGQISNGYTPVLD 760
+NH GQI NGYTPVLD
Sbjct: 1 MNHLGQIKNGYTPVLD 16
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 32.7 bits (71), Expect = 0.27
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +3
Query: 276 MLEPSTKMPWFKAWQVERKEGKADGKCLIEALDAIL----PPARPTDKPLRLPLQDVYKI 443
+L S K W A K+ D K + + LDA++ PP D+P + + + K
Sbjct: 75 VLYASAKEGW--ASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMMEKD 132
Query: 444 GGIGTVPVGRVETGVLKPGTIVS 512
+G + GRV +GV++ G V+
Sbjct: 133 FYLGRILTGRVTSGVVRVGDRVN 155
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 330 KEGKADGKCLIEALDAILPPARPTDKP 410
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 100 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 246
T GV++ G+ + +S PP S R E++ E S++ Y+P V F
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVF 62
>At5g44785.2 68418.m05490 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 442
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 145 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPILDG 264
+TE + P+ E K E+S++I IG+ V F P DG
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDG 102
>At5g44785.1 68418.m05489 expressed protein contains Pfam PF05329:
Protein of unknown function (DUF731)
Length = 440
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 145 STEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPILDG 264
+TE + P+ E K E+S++I IG+ V F P DG
Sbjct: 63 ATEKESTPPKKIEYKPEISNWINLIGFVEQPVQFGPCSDG 102
>At3g16310.1 68416.m02059 mitotic phosphoprotein N' end (MPPN)
family protein contains Pfam profile PF05172: MPPN
(Mitotic PhosphoProtein N' end) (rrm-like) domain
Length = 329
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 483 GVLKPGTIVSLPPPTSLLKSNLWR 554
GV++PG +V+LPPP + + + R
Sbjct: 152 GVVQPGALVTLPPPREVARPEVQR 175
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -3
Query: 505 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 401
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 163 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 252
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At5g38140.1 68418.m04596 histone-like transcription factor
(CBF/NF-Y) family protein similar to CCAAT-binding
transcription factor subunit AAB-1 (GI:2583171)
[Neurospora crassa]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 195
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 146 PLNHHTVSPDLRKSRRKYPHTSRRLATTQLLSLSCPFWMARRQHVGAF 289
P +H+T+ P L + R +P TS+ + L + FW +R+ +G F
Sbjct: 16 PRSHNTM-PMLDQFRSNHPETSKIEGVSSLDTALKVFWNNQREQLGNF 62
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 460 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 356
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 273
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 4/28 (14%)
Frame = +3
Query: 213 EDWL--QPSC--CRFRAHSGWHGDNMLE 284
+ WL Q +C C+FRAHSGW + ++
Sbjct: 239 DPWLRQQGTCPVCKFRAHSGWQEQDEID 266
>At2g46510.1 68415.m05796 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 566
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 438 KIGGIGTVPVGRVETGVLKPGTIVSLPPPTSLLKS 542
K GI T+ + + GVL+ G++ SLP L+KS
Sbjct: 200 KSAGIRTIVMVPTDAGVLELGSVWSLPENIGLVKS 234
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 46 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 204
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At1g19430.1 68414.m02421 dehydration-responsive protein-related low
similarity to early-responsive to dehydration stress
ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 724
Score = 27.9 bits (59), Expect = 7.8
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +2
Query: 479 NWCVETRYHCVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNV 619
NW ET + F P N TT +V + E +QE VP G NV+ V
Sbjct: 302 NWVNETGEYLSF-PQNQTTFNGNVLQYLEFIQEMVPDIEWGKNVRIV 347
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,286,434
Number of Sequences: 28952
Number of extensions: 457730
Number of successful extensions: 1571
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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