Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30043
(744 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 116 2e-26
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 116 2e-26
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 75 8e-14
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 46 4e-05
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 43 3e-04
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 39 0.004
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 39 0.005
07_03_1414 - 26403361-26403969 31 0.73
07_03_1422 + 26462871-26463434,26463772-26463897 30 1.7
07_03_1413 - 26396426-26396890 30 1.7
11_04_0354 + 16697571-16700256,16700335-16700759 29 2.9
07_03_1268 + 25328448-25328506,25328589-25328768,25328872-253289... 29 2.9
03_03_0006 - 13666961-13667755 29 2.9
04_04_1159 - 31352922-31353098,31354117-31354267,31354581-313548... 28 6.8
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 28 6.8
02_02_0061 + 6468190-6471046,6471318-6471736 28 6.8
08_02_0825 - 21570628-21570715,21571436-21571812,21572364-215727... 28 9.0
07_03_1383 + 26172329-26172448,26172770-26172961 28 9.0
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 28 9.0
03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,117... 28 9.0
01_05_0762 + 24990915-24990970,24991076-24991592,24991676-249917... 28 9.0
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 116 bits (279), Expect = 2e-26
Identities = 49/75 (65%), Positives = 66/75 (88%)
Frame = +1
Query: 508 LAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFS 687
+AHDVDPIELV++LPALCRKM VPYCIVKGK+RLG++VH+KT + L LT V++ D+ FS
Sbjct: 149 IAHDVDPIELVVWLPALCRKMEVPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFS 208
Query: 688 KVVEAIKTNFNERYE 732
K++EAIK NFN++++
Sbjct: 209 KILEAIKANFNDKFD 223
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +1
Query: 127 NTLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLHVV*KCP 273
N LFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L K P
Sbjct: 22 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVP 70
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +3
Query: 255 RRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXX 434
+RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 65 QRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAK 123
Query: 435 RPNTIRSGTNTVTKLVEKKKAHL 503
+P ++ G N VT L+E+ KA L
Sbjct: 124 KPIVVKYGLNHVTYLIEQSKAQL 146
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 116 bits (279), Expect = 2e-26
Identities = 48/75 (64%), Positives = 67/75 (89%)
Frame = +1
Query: 508 LAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFS 687
+AHDVDPIELV++LPALCRKM +PYCIVKGK+RLG++VH+KT + L LT V++ D+ FS
Sbjct: 134 IAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFS 193
Query: 688 KVVEAIKTNFNERYE 732
K++EAIK+NFN++++
Sbjct: 194 KILEAIKSNFNDKFD 208
Score = 65.3 bits (152), Expect = 5e-11
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +1
Query: 127 NTLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLHVV*KCP 273
N LFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL K P
Sbjct: 23 NPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVP 71
Score = 36.3 bits (80), Expect = 0.026
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +3
Query: 255 RRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 356
+RLKVPP +NQFT+TLDK ++L++ + E
Sbjct: 66 QRLKVPPALNQFTRTLDKNLGCQKERLLKRAQAE 99
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 74.5 bits (175), Expect = 8e-14
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +1
Query: 508 LAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVESGDRASFS 687
+AHDVDPIELV++LPALCRKM +VH+KT + L LT V++ D+ FS
Sbjct: 133 IAHDVDPIELVVWLPALCRKM--------------EIVHKKTASVLCLTTVKNEDKLEFS 178
Query: 688 KVVEAIKTNFNERYE 732
K++EAIK NFN++++
Sbjct: 179 KILEAIKANFNDKFD 193
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/49 (57%), Positives = 34/49 (69%)
Frame = +1
Query: 127 NTLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLHVV*KCP 273
N LFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L K P
Sbjct: 6 NPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVP 54
Score = 60.5 bits (140), Expect = 1e-09
Identities = 34/83 (40%), Positives = 43/83 (51%)
Frame = +3
Query: 255 RRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXX 434
+RLKVPP +NQFT+TLDK A LFK+L KYRPE
Sbjct: 49 QRLKVPPALNQFTRTLDKNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAK 107
Query: 435 RPNTIRSGTNTVTKLVEKKKAHL 503
+P ++ G N VT L+E+ KA L
Sbjct: 108 KPIVVKYGLNHVTYLIEQSKAQL 130
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +1
Query: 484 RRRRRTCGLAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRL--GALVHRKTCTCLALTN 657
R ++ C +A ++ PI+++ +P LC + +PY V K L R TC L LT
Sbjct: 58 RGQKGLCIIAGNISPIDVITHVPILCEEANIPYVYVPSKEDLATAGTTKRPTCCVLVLTK 117
Query: 658 VESGDRASFSKVVEAIKTNFNE 723
G+ V E +KT++++
Sbjct: 118 PAKGELE--EDVKEKLKTDYDQ 137
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/79 (25%), Positives = 37/79 (46%)
Frame = +1
Query: 484 RRRRRTCGLAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLALTNVE 663
R + C +A ++ PI+++ +P LC + +PY V K L K TC L +
Sbjct: 58 RGNKGLCVIAGNISPIDVITHVPILCEEANIPYIYVPSKEDLATAGTTKRPTCCVLVMTK 117
Query: 664 SGDRASFSKVVEAIKTNFN 720
+V E +K++++
Sbjct: 118 PAKGEINEEVKEKLKSDYD 136
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 508 LAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRAS 681
+A D +P+E++L LP L VPY V K LG V R C +N S R
Sbjct: 54 MAADAEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASNLRDP 113
Query: 682 FSKVVEAIK 708
+ + AI+
Sbjct: 114 INNLKVAIE 122
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 38.7 bits (86), Expect = 0.005
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +1
Query: 508 LAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGAL--VHRKTCTCLALTNVESGDRAS 681
+A D +P+E++L LP L VPY V K LG V R C +N S +
Sbjct: 56 MAADTEPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKTP 115
Query: 682 FSKVVEAIK 708
+ +AI+
Sbjct: 116 IQNLKDAIE 124
>07_03_1414 - 26403361-26403969
Length = 202
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = -1
Query: 237 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEESIHDLLGLNLFD 97
AL A + P + G++ + + +T G+ L P LEE++ GL L+D
Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 237 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEESIHDLLGLNLFD 97
AL + P Y G+V + + +T G+ L P LEE+ GL L D
Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 237 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEESIHDLLGLNLFD 97
AL + P Y G+V + + +T G+ L P LEE+ GL L D
Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>11_04_0354 + 16697571-16700256,16700335-16700759
Length = 1036
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = -1
Query: 273 GALSDDVKYSLLALDADILGPSYKSGQVPSWLNALTNGKVLW 148
G ++ D+K + +L L +Y +G++P+WL AL + K+++
Sbjct: 111 GDITSDLK-NCTSLQGISLKSNYLTGEIPAWLGALPSLKLIY 151
>07_03_1268 +
25328448-25328506,25328589-25328768,25328872-25328974,
25329095-25329119,25329587-25329614,25330603-25330755,
25331339-25333421,25333666-25334983,25335256-25335339,
25335756-25335769
Length = 1348
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 207 KMAQVYPHPAPEGCTSRRLKVPPPINQF-TQTLDKTTAKG 323
K P PAP G SRRL V IN F ++ ++T++ G
Sbjct: 287 KETDALPAPAPAGGGSRRLSVQDRINMFESKQKEQTSSSG 326
>03_03_0006 - 13666961-13667755
Length = 264
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +2
Query: 443 HHPIRHKHSHQAGREEEG-ALVVSLMMLI 526
HH +RH+H H R G A VV L L+
Sbjct: 100 HHRVRHRHRHHRDRGRRGHAAVVDLSALV 128
>04_04_1159 -
31352922-31353098,31354117-31354267,31354581-31354812,
31354902-31355112,31355791-31355909,31355994-31356176,
31356283-31356481,31356636-31357015,31357127-31357191,
31357925-31357990,31358427-31358501,31358781-31358852,
31359318-31359386,31359476-31359547,31359658-31359729,
31360126-31360230,31360282-31360353,31361053-31361230,
31361707-31361791
Length = 860
Score = 28.3 bits (60), Expect = 6.8
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -1
Query: 246 SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPL---LEESIHDLLG-LNLFDHQWGGG 79
SL L+ + + SG++PS L+ LT K+LW I D +G NL D ++ G
Sbjct: 164 SLFKLEELFIDSAGLSGELPSSLSKLTRMKILWASDNNFTGQIPDYIGSWNLTDLRFQGN 223
Query: 78 YF 73
F
Sbjct: 224 SF 225
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 172 PDQWQSSLASSRREYSRSSWAQPF*PPMGRR 80
P SSLA +RR +R AQP PP RR
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARR 54
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = -1
Query: 246 SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEES 130
SL L A +LG + +G +PS++ +L N K L +LEE+
Sbjct: 111 SLQNLQALVLGENRLTGSIPSFIGSLANLKFL--ILEEN 147
>08_02_0825 -
21570628-21570715,21571436-21571812,21572364-21572755,
21573943-21574311,21574395-21574580,21574709-21574845,
21575030-21575089,21575206-21575277,21575399-21575542,
21575702-21575773,21575928-21576060,21576157-21576247
Length = 706
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 219 VYPHPAPEGCTSRRLKVPPPIN-QFTQTLDKTTAKGLFKILEKYRPE 356
VYP+ P G + RL+ PP++ Q + + TA+GL + E+ P+
Sbjct: 407 VYPY-MPNGSVASRLRGKPPLDWQTRKRIAVGTARGLLYLHEQCDPK 452
>07_03_1383 + 26172329-26172448,26172770-26172961
Length = 103
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 433 RGPTPSDPAQTQSPSWSRRRRRTCGLAHDVDPIELVLF 546
RG T + A+ PS SRRRRR C + + +VLF
Sbjct: 12 RGGTAAASARAAPPSSSRRRRRYCNGVYLGFLVFIVLF 49
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = -1
Query: 252 KYSLLALDADILGPSY-KSGQVPS-WLNALTNGKVLWPLLEESIHDLLGLNLFDHQW 88
K +L A + GP Y K VP WLNA+ N ++L + ES + L L D +W
Sbjct: 189 KAALEAKYQKLYGPLYSKEKGVPDFWLNAMKNNEILAEEIHESDEEALKY-LKDIKW 244
>03_01_0149 - 1175689-1176258,1176345-1176509,1176631-1177539,
1178179-1178378,1178505-1178605,1178747-1179369,
1179451-1179546,1179637-1179798,1179889-1180068,
1180173-1180323,1180408-1180641,1180753-1180913,
1181041-1181163,1181261-1181421,1181655-1181877,
1181952-1182346,1182461-1182671,1183536-1184522
Length = 1883
Score = 27.9 bits (59), Expect = 9.0
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +1
Query: 469 SPSWSRRRRRTCGLAHDVDPIELVLFLPALCRKMGVPYCIVKGKSRLGALVHRKTCTCLA 648
SP + R + ++D V P LC +P +V+G RL +++ R LA
Sbjct: 1262 SPRFEHSDAREGDFSENLDKTYYVYLPPELCLVHPLPGSLVRGAQRLPSIMRRVESMLLA 1321
Query: 649 LTNVESGD-RASFSKVVEAI 705
+ + D +K++EA+
Sbjct: 1322 VQLKDIIDYPVPATKILEAL 1341
>01_05_0762 +
24990915-24990970,24991076-24991592,24991676-24991753,
24993678-24993743,24994819-24994943,24995414-24995612,
24995909-24996137,24996259-24996425,24996526-24996735,
24997245-24997355,24997436-24997612,24997826-24998284,
24998676-24998966
Length = 894
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = -1
Query: 270 ALSDDVKYSLLALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEE-SIHDLLGLNL 103
A S+ S +D+ GPS S Q+PS + + G + S+ DLLGL +
Sbjct: 704 ATSNGSSASTYNAPSDLSGPSLLSSQIPSETSLINPGAPTYSSQSNFSLDDLLGLGV 760
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,711,858
Number of Sequences: 37544
Number of extensions: 481117
Number of successful extensions: 1745
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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