Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30039
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           28   0.29 
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    27   0.51 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    24   4.7  

>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +2

Query: 344 ECWITYTSCGVVNDENLCGGEK 409
           EC I Y+S G + D  LC G K
Sbjct: 198 ECTIAYSSSGGITDRMLCAGYK 219


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 449 YPFLRWAFKINIIIS 405
           + FLRW F +NI+IS
Sbjct: 153 FTFLRWLFSVNIVIS 167


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 93   NRLCNAITNCCRH 131
            N  C   TNCC H
Sbjct: 1064 NERCTLFTNCCNH 1076


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 702,534
Number of Sequences: 2352
Number of extensions: 13883
Number of successful extensions: 33
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)