Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30035X
         (555 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1554 + 27659995-27660093,27661084-27661120,27661204-276612...    29   1.9  
01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,437...    29   2.5  
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600...    28   4.4  
07_01_0278 + 2039873-2039896,2040342-2040407,2040842-2040903,204...    28   5.8  
07_03_0029 - 12614394-12614984,12617973-12618005,12618362-12618370     27   7.6  

>07_03_1554 +
           27659995-27660093,27661084-27661120,27661204-27661280,
           27662272-27662342,27662512-27662590,27662726-27662828,
           27662963-27663082,27663180-27663257,27663416-27663471,
           27663588-27663657,27664179-27664266,27664503-27664800,
           27664943-27665158,27665521-27665841,27666054-27666103,
           27666493-27666553,27666633-27666716,27666926-27667039,
           27667134-27667300,27667559-27667628,27668328-27668507,
           27668619-27668807
          Length = 875

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -3

Query: 532 YNRRV*IIESTLDELNSALDFLERKNDDIHQQLKEL 425
           Y R+  +  STL EL + LDF + +   + +QL  L
Sbjct: 817 YGRQAPVASSTLVELTTRLDFFKERRSQLMEQLHSL 852


>01_01_0588 + 4372877-4372949,4374328-4376262,4376940-4377015,
            4378900-4378970,4379038-4379144,4379241-4379711,
            4379791-4379976,4380132-4380425,4380820-4381434,
            4382219-4382615,4382768-4382850,4383397-4383567,
            4384046-4384243,4384754-4385314,4385401-4385460,
            4385553-4385869,4385980-4386403,4386539-4387006,
            4387093-4387209,4387306-4387427,4387506-4388247,
            4388453-4388485,4388625-4388879,4388975-4389160,
            4390115-4390453,4391293-4392045
          Length = 3017

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = -3

Query: 493  ELNSALDFLERKNDDIHQQLKELLQSNI--AIRQEMREENK 377
            E   A+  LER  DDI   L++L+Q  +   +R+++ EE K
Sbjct: 913  ETGLAVATLERLGDDIESDLRQLMQGTVRRLLRRQIAEEMK 953


>10_08_0558 +
           18756797-18756887,18757189-18757262,18759881-18760069,
           18760190-18760309,18760457-18760521,18760684-18760828,
           18761304-18763337,18763904-18764025,18764127-18764309,
           18764635-18764690,18765086-18765141
          Length = 1044

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
 Frame = -3

Query: 505 STLDELNSALDFLERKNDDIHQQLKELLQSN----IAIR--QEMREE-NKDVS 368
           S ++EL   L   +  N D+H QL+++ +SN    +A++   EM E+ NK++S
Sbjct: 421 SQIEELKQELGHEKNLNGDLHLQLQKMQESNSELLLAVKDLDEMLEQKNKEIS 473


>07_01_0278 +
           2039873-2039896,2040342-2040407,2040842-2040903,
           2042839-2043067,2043787-2044014,2044177-2044469,
           2044594-2044909
          Length = 405

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 11/34 (32%), Positives = 22/34 (64%)
 Frame = -3

Query: 499 LDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 398
           LD+L   ++ L  K+D++HQ L+++   +  IR+
Sbjct: 120 LDDLTIMMETLRVKDDELHQLLQDIRARDATIRE 153


>07_03_0029 - 12614394-12614984,12617973-12618005,12618362-12618370
          Length = 210

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -3

Query: 508 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 377
           +S LD+L    +  ++K D + Q+  ELL     IRQEM  E +
Sbjct: 122 KSKLDKLIVGPESSQKKLDKLKQKESELLAQLEQIRQEMASEQQ 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,858,098
Number of Sequences: 37544
Number of extensions: 181008
Number of successful extensions: 391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 391
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1257681096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)