Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30034
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14 pro... 146 9e-35
BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14 p... 146 9e-35
BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14 p... 146 9e-35
BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14 p... 146 9e-35
BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14 p... 146 9e-35
BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14 p... 146 9e-35
BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal pr... 140 4e-33
M94314-1|AAC28251.1| 157|Homo sapiens ribosomal protein L30 pro... 55 3e-07
CR456729-1|CAG33010.1| 157|Homo sapiens RPL24 protein. 55 3e-07
BC070193-1|AAH70193.1| 157|Homo sapiens ribosomal protein L24 p... 55 3e-07
BC000690-1|AAH00690.1| 157|Homo sapiens ribosomal protein L24 p... 55 3e-07
AB061828-1|BAB79466.1| 157|Homo sapiens ribosomal protein L24 p... 55 3e-07
AL158815-1|CAI19461.1| 128|Homo sapiens se, the PEX6 gene for p... 54 5e-07
BC016588-1|AAH16588.1| 166|Homo sapiens DENND1B protein protein. 30 9.1
AL365258-7|CAI14215.1| 76|Homo sapiens DENN/MADD domain contai... 30 9.1
>M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 146 bits (353), Expect = 9e-35
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLAAQDVAQRCKELGI 90
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHIKLRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 146 bits (353), Expect = 9e-35
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLAAQDVAQRCKELGI 90
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHIKLRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 146 bits (353), Expect = 9e-35
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLAAQDVAQRCKELGI 90
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHIKLRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 146 bits (353), Expect = 9e-35
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLAAQDVAQRCKELGI 90
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHIKLRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 146 bits (353), Expect = 9e-35
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLAAQDVAQRCKELGI 90
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHIKLRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 146 bits (353), Expect = 9e-35
Identities = 69/88 (78%), Positives = 75/88 (85%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGMKV
Sbjct: 3 PRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAMLAAQDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLAAQDVAQRCKELGI 90
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHIKLRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
>BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal
protein S14 protein.
Length = 170
Score = 140 bits (339), Expect = 4e-33
Identities = 66/88 (75%), Positives = 72/88 (81%)
Frame = -1
Query: 519 PEKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 340
P K K KEE + LGPQ GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGMKV
Sbjct: 3 PGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGMKV 62
Query: 339 KADRDEASPYAAMLAAQDVAEKCKTLGI 256
KADRDE+SPYAAML QDVA++CK LGI
Sbjct: 63 KADRDESSPYAAMLTTQDVAQRCKELGI 90
Score = 46.8 bits (106), Expect = 7e-05
Identities = 26/49 (53%), Positives = 28/49 (57%)
Frame = -3
Query: 253 ALHIKLRAXXXXXXXXXXXGAQXXXXXXXXXSMKIGRIEDVTPVPSDST 107
ALHI+LRA GAQ MKIGRIEDVTP+PSDST
Sbjct: 92 ALHIQLRATGGNRTKTLGPGAQSALRALACSGMKIGRIEDVTPIPSDST 140
>M94314-1|AAC28251.1| 157|Homo sapiens ribosomal protein L30
protein.
Length = 157
Score = 54.8 bits (126), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35 KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65
>CR456729-1|CAG33010.1| 157|Homo sapiens RPL24 protein.
Length = 157
Score = 54.8 bits (126), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35 KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65
>BC070193-1|AAH70193.1| 157|Homo sapiens ribosomal protein L24
protein.
Length = 157
Score = 54.8 bits (126), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35 KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65
>BC000690-1|AAH00690.1| 157|Homo sapiens ribosomal protein L24
protein.
Length = 157
Score = 54.8 bits (126), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35 KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65
>AB061828-1|BAB79466.1| 157|Homo sapiens ribosomal protein L24
protein.
Length = 157
Score = 54.8 bits (126), Expect = 3e-07
Identities = 22/31 (70%), Positives = 26/31 (83%)
Frame = +2
Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
KCE+A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35 KCESAFLSKRNPRQINWTVLYRRKHKKGQSE 65
>AL158815-1|CAI19461.1| 128|Homo sapiens se, the PEX6 gene for
peroxisomal biogenesis factorA, member 8) protein.
Length = 128
Score = 54.0 bits (124), Expect = 5e-07
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +2
Query: 551 KCEAAHLMRRNPRKVTWTVLYRRKFKKGQEE 643
KCE A L +RNPR++ WTVLYRRK KKGQ E
Sbjct: 35 KCELAFLSKRNPRQINWTVLYRRKHKKGQSE 65
>BC016588-1|AAH16588.1| 166|Homo sapiens DENND1B protein protein.
Length = 166
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 610 QDSPCYFTRIPPHQMGGFTFSALKLKAEP 524
+DSP Y RIPP ++ F F KL+ P
Sbjct: 118 EDSPAYLPRIPPGKVRRFAFCIKKLENFP 146
>AL365258-7|CAI14215.1| 76|Homo sapiens DENN/MADD domain
containing 1B protein.
Length = 76
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 610 QDSPCYFTRIPPHQMGGFTFSALKLKAEP 524
+DSP Y RIPP ++ F F KL+ P
Sbjct: 28 EDSPAYLPRIPPGKVRRFAFCIKKLENFP 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,812,902
Number of Sequences: 237096
Number of extensions: 2455761
Number of successful extensions: 5303
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5297
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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