Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30033
(660 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C) 86 2e-17
At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C) 86 2e-17
At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B) 86 2e-17
At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) simila... 85 4e-17
At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) simila... 85 4e-17
At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) simila... 85 4e-17
At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) simila... 64 8e-11
At5g06740.1 68418.m00762 lectin protein kinase family protein co... 27 8.4
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 8.4
>At2g44120.2 68415.m05488 60S ribosomal protein L7 (RPL7C)
Length = 247
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1
Query: 493 GIPQLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVG 660
G P LKSV+EL+YKRG+ KL+ QRI +T NSIV++ L KH IICVEDLIHEI TVG
Sbjct: 142 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVG 197
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPNLR 511
+ +K+LQL RLRQI NGVF+++NKATVNML EPY+ +GYPNL+
Sbjct: 103 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLK 147
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 63 KDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 111
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 109 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSRN 264
VPESVLK + + +++ ++ IFKRAEQY KEY ++
Sbjct: 13 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKD 64
>At2g44120.1 68415.m05487 60S ribosomal protein L7 (RPL7C)
Length = 242
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1
Query: 493 GIPQLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVG 660
G P LKSV+EL+YKRG+ KL+ QRI +T NSIV++ L KH IICVEDLIHEI TVG
Sbjct: 137 GYPNLKSVKELIYKRGYGKLNHQRIALTDNSIVDQALGKHGIICVEDLIHEIMTVG 192
Score = 68.9 bits (161), Expect = 3e-12
Identities = 29/45 (64%), Positives = 38/45 (84%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPNLR 511
+ +K+LQL RLRQI NGVF+++NKATVNML EPY+ +GYPNL+
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATVNMLRRVEPYVTYGYPNLK 142
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
K+ + IRL R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 58 KDNELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 109 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSRN 264
VPESVLK + + +++ ++ IFKRAEQY KEY ++
Sbjct: 8 VPESVLKKIKRQEEWALAKKDEAVAAKKKSVEARKLIFKRAEQYAKEYAEKD 59
>At2g01250.1 68415.m00037 60S ribosomal protein L7 (RPL7B)
Length = 242
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +1
Query: 493 GIPQLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVG 660
G P LKSV+EL+YKRG+ KL+ QRI +T NSIVE+ L KH IIC EDLIHEI TVG
Sbjct: 137 GFPNLKSVKELIYKRGYGKLNHQRIALTDNSIVEQALGKHGIICTEDLIHEILTVG 192
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPNLR 511
+ +K+LQL RLRQI NGVF+++NKAT+NML EPY+ +G+PNL+
Sbjct: 98 KTKKILQLLRLRQIFNGVFLKVNKATMNMLRRVEPYVTYGFPNLK 142
Score = 54.8 bits (126), Expect = 5e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
KE++ I L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 58 KEKELISLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 106
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = +1
Query: 109 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSR 261
VPESVLK Q + + ++ IFKRAEQY KEY +
Sbjct: 8 VPESVLKKRKREEEWALEKKQNVEAAKKKNAENRKLIFKRAEQYSKEYAEK 58
>At3g13580.3 68416.m01710 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +1
Query: 493 GIPQLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVG 660
G P LKSV+EL+YKRGF KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVG 194
Score = 68.5 bits (160), Expect = 4e-12
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPNLR 511
+ +K+LQL RLRQI NGVF+++NKAT+NML EPY+ +GYPNL+
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 88 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSR 261
+++ VPESVLK Q + +K++ IF RA+QY KEY+ +
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60
>At3g13580.2 68416.m01709 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +1
Query: 493 GIPQLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVG 660
G P LKSV+EL+YKRGF KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVG 194
Score = 68.5 bits (160), Expect = 4e-12
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPNLR 511
+ +K+LQL RLRQI NGVF+++NKAT+NML EPY+ +GYPNL+
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 88 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSR 261
+++ VPESVLK Q + +K++ IF RA+QY KEY+ +
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60
>At3g13580.1 68416.m01708 60S ribosomal protein L7 (RPL7D) similar
to 60S ribosomal protein L7 GB:AAD14525 GI:4262232 from
[Arabidopsis thaliana]
Length = 244
Score = 85.0 bits (201), Expect = 4e-17
Identities = 39/56 (69%), Positives = 45/56 (80%)
Frame = +1
Query: 493 GIPQLKSVRELVYKRGFAKLSGQRIPITSNSIVEKRLHKHNIICVEDLIHEIFTVG 660
G P LKSV+EL+YKRGF KL+ QR +T NSIV++ L KH IICVEDLIHEI TVG
Sbjct: 139 GYPNLKSVKELIYKRGFGKLNHQRTALTDNSIVDQGLGKHGIICVEDLIHEIMTVG 194
Score = 68.5 bits (160), Expect = 4e-12
Identities = 28/45 (62%), Positives = 38/45 (84%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPNLR 511
+ +K+LQL RLRQI NGVF+++NKAT+NML EPY+ +GYPNL+
Sbjct: 100 KTKKILQLLRLRQIFNGVFLKVNKATINMLRRVEPYVTYGYPNLK 144
Score = 56.8 bits (131), Expect = 1e-08
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
KER+ I+L R+A+ +G +YV EAKL F+IRIRGIN + PK+ K L
Sbjct: 60 KERELIQLKREAKLKGGFYVDPEAKLLFIIRIRGINAIDPKTKKILQLL 108
Score = 33.5 bits (73), Expect = 0.13
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 88 DSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSR 261
+++ VPESVLK Q + +K++ IF RA+QY KEY+ +
Sbjct: 3 EAESKTVVPESVLKKRKREEEWALAKKQELEAAKKQNAEKRKLIFNRAKQYSKEYQEK 60
>At1g80750.1 68414.m09474 60S ribosomal protein L7 (RPL7A) similar
to ribosomal protein L7 GB:AAA03081 GI:307388 from [Homo
sapiens]
Length = 247
Score = 64.1 bits (149), Expect = 8e-11
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 12/205 (5%)
Frame = +1
Query: 82 KEDSKKLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRSR 261
+E++K L +PE VLK + S KKK KR E +V E+R++
Sbjct: 3 EEEAKGLDYIPEIVLKKRKNRDELAFIRKKQLELGNSGKKKKKVSDIKRPEDFVHEFRAK 62
Query: 262 NV----MK--------SD*PDKHAIVATTTFPGKPNWHLSSESVVSTKFHRSP*SSATV* 405
V MK S P K +V GK + H ++ +++ +S +
Sbjct: 63 EVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFA- 121
Query: 406 TAPNKQWCVCTSE*GYCEYAKYRRALHCLGIPQLKSVRELVYKRGFAKLSGQRIPITSNS 585
A + + Y Y G P KSV++L+YK+G + G +P+T N+
Sbjct: 122 KATDSLFQKLLKVQPYVTY----------GYPNDKSVKDLIYKKGCTIIEGNPVPLTDNN 171
Query: 586 IVEKRLHKHNIICVEDLIHEIFTVG 660
I+E+ L +H I+ +EDL++EI VG
Sbjct: 172 IIEQALGEHKILGIEDLVNEIARVG 196
Score = 34.7 bits (76), Expect = 0.055
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +2
Query: 377 EVRKVLQLFRLRQINNGVFVRLNKATVNMLSIAEPYIAWGYPN 505
+ +++L +L+ + GVF + + L +PY+ +GYPN
Sbjct: 102 KTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPN 144
Score = 34.3 bits (75), Expect = 0.073
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 258 KERDEIRLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKSVKFCNCL 404
KE D IR+ ++ + + P ++ L F+IRI+G N + PK+ + N L
Sbjct: 62 KEVDMIRMKQRVKRPKSSPPPVKSDLVFIIRIQGKNDMHPKTKRILNNL 110
>At5g06740.1 68418.m00762 lectin protein kinase family protein
contains Legume lectins beta-chain signature,
PROSITE:PS00307 and Serine/Threonine protein kinases
active-site signature, PROSITE:PS00108
Length = 652
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 332 IGICHPNPWYQPSFTEVRKVL 394
+ CHPNP +PS V KVL
Sbjct: 586 LACCHPNPNQRPSMKTVLKVL 606
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = -3
Query: 409 QSKQLQNFTDF-GETWLIPRIRMTNANLASPGT 314
+ KQL+ + G TW+ P I +N ++ SPGT
Sbjct: 126 ERKQLRTHLIWTGGTWIQPEIEESNKSMFSPGT 158
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,292
Number of Sequences: 28952
Number of extensions: 267919
Number of successful extensions: 700
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1383534864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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