Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30030
         (675 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.3  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.3  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.0  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 87  PSPVTPLSVISNSVSCAHPYPLRN 158
           PSP T  SV S SVS A PY L++
Sbjct: 702 PSPST--SVASPSVSVASPYMLQS 723


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +3

Query: 87  PSPVTPLSVISNSVSCAHPYPLRN 158
           PSP T  SV S SVS A PY L++
Sbjct: 594 PSPST--SVASPSVSVASPYMLQS 615


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 620 VS*YDNDF*TCLIQVSNLKLKPLKTCL 540
           V+ +++ F TCLI ++   +  L TCL
Sbjct: 232 VALFNDVFGTCLILITGKSIVQLLTCL 258


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 3/47 (6%)
 Frame = +1

Query: 454 IFYF---II*VQAHLITYLVISYIFFLLIFTFRHVFSGFNFKLLTCI 585
           I+YF    I    HL+ Y V+  +  +  F +  +    +  LL CI
Sbjct: 212 IYYFYSAFIIFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCI 258


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 620 VS*YDNDF*TCLIQVSNLKLKPLKTCL 540
           V+ +++ F TCLI ++   +  L TCL
Sbjct: 232 VALFNDVFGTCLILITGKSIVQLLTCL 258


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +1

Query: 610 Y*LTIVLVLCNCLLHII 660
           Y +  +L+L +CLLH++
Sbjct: 267 YGVHTLLILFSCLLHLV 283


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,344
Number of Sequences: 336
Number of extensions: 2559
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)