Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30026X
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    21   5.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    20   9.6  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    20   9.6  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    20   9.6  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 110 GFILLSKVVKKLLYNCMRLSPLCRAGFLTNSCN 12
           GFI+ S VV K+ Y   ++  +C    +   CN
Sbjct: 95  GFIVPSGVVYKIGYWLHQICHICELHTIFLVCN 127


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/35 (22%), Positives = 19/35 (54%)
 Frame = -3

Query: 228 SQCFIIHFNFRFHLLKECDSISLVDILFHDMSNDL 124
           S+ F + FN     ++  DS+  ++ L H ++ ++
Sbjct: 482 SRPFEVRFNPHTGRVEVLDSVEKLETLVHQLNTEV 516


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 5/13 (38%), Positives = 8/13 (61%)
 Frame = +3

Query: 132 CSYRGTVCQQERC 170
           C++ G  C Q+ C
Sbjct: 104 CAFDGICCSQDSC 116


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 200 FVSTFSRNVTASLLLTYCST 141
           FV   + N+T S +LT C +
Sbjct: 25  FVMEDANNLTQSTILTTCES 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,738
Number of Sequences: 336
Number of extensions: 1724
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)