Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30026X
(380 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p pro... 88 3e-18
AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteaso... 88 3e-18
AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-P... 88 3e-18
AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-P... 88 3e-18
AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p pro... 30 0.88
AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA... 30 0.88
BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p pro... 29 2.7
BT012342-1|AAS77467.1| 372|Drosophila melanogaster AT10870p pro... 29 2.7
AY128454-1|AAM75047.1| 1018|Drosophila melanogaster LP08082p pro... 29 2.7
AF245516-1|AAF73427.1| 1018|Drosophila melanogaster Ran binding ... 29 2.7
AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein. 29 2.7
AE014297-1291|AAF54632.1| 1018|Drosophila melanogaster CG5252-PA... 29 2.7
AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-P... 29 2.7
BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p pro... 28 4.7
BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p pro... 28 4.7
AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p pro... 28 4.7
AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB... 28 4.7
AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA... 28 4.7
>AY061232-1|AAL28780.1| 382|Drosophila melanogaster LD17530p
protein.
Length = 382
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/89 (46%), Positives = 66/89 (74%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LT+KL FV++ +LQ L+QLY NFL+TFE+KINP L++I+ +V+ +K++A+ F
Sbjct: 42 LTIKLVTFVRHESLQDETALLQLYQNFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEF 101
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLNS 267
LEK++ KVK+ DEA+ +V+QG + L++
Sbjct: 102 LEKMKDKVKICDEAVWYLQVMQGNLYLSN 130
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 255 YIEQLNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
Y+ LND +A +KIIE L LE+A VTPVHG++Y LA
Sbjct: 127 YLSNLNDLNATKKIIEELRDVLEEAGNVTPVHGKYYMLA 165
>AF145311-1|AAF08392.1| 382|Drosophila melanogaster 26S proteasome
regulatory complexsubunit p39A protein.
Length = 382
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/89 (46%), Positives = 66/89 (74%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LT+KL FV++ +LQ L+QLY NFL+TFE+KINP L++I+ +V+ +K++A+ F
Sbjct: 42 LTIKLVTFVRHESLQDETALLQLYQNFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEF 101
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLNS 267
LEK++ KVK+ DEA+ +V+QG + L++
Sbjct: 102 LEKMKDKVKICDEAVWYLQVMQGNLYLSN 130
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 255 YIEQLNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
Y+ LND +A +KIIE L LE+A VTPVHG++Y LA
Sbjct: 127 YLSNLNDLNATKKIIEELRDVLEEAGNVTPVHGKYYMLA 165
>AE014297-3373|AAF56174.1| 382|Drosophila melanogaster CG10230-PB,
isoform B protein.
Length = 382
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/89 (46%), Positives = 66/89 (74%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LT+KL FV++ +LQ L+QLY NFL+TFE+KINP L++I+ +V+ +K++A+ F
Sbjct: 42 LTIKLVTFVRHESLQDETALLQLYQNFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEF 101
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLNS 267
LEK++ KVK+ DEA+ +V+QG + L++
Sbjct: 102 LEKMKDKVKICDEAVWYLQVMQGNLYLSN 130
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 255 YIEQLNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
Y+ LND +A +KIIE L LE+A VTPVHG++Y LA
Sbjct: 127 YLSNLNDLNATKKIIEELRDVLEEAGNVTPVHGKYYMLA 165
>AE014297-3372|AAF56173.1| 382|Drosophila melanogaster CG10230-PA,
isoform A protein.
Length = 382
Score = 88.2 bits (209), Expect = 3e-18
Identities = 41/89 (46%), Positives = 66/89 (74%)
Frame = +1
Query: 1 LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTF 180
LT+KL FV++ +LQ L+QLY NFL+TFE+KINP L++I+ +V+ +K++A+ F
Sbjct: 42 LTIKLVTFVRHESLQDETALLQLYQNFLSTFETKINPYGLIQILEVVVDNIGDKKEAIEF 101
Query: 181 LEKVETKVKMNDEALALCKVLQGQITLNS 267
LEK++ KVK+ DEA+ +V+QG + L++
Sbjct: 102 LEKMKDKVKICDEAVWYLQVMQGNLYLSN 130
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +3
Query: 255 YIEQLNDYDAAEKIIEHLESTLEDADGVTPVHGRFYKLA 371
Y+ LND +A +KIIE L LE+A VTPVHG++Y LA
Sbjct: 127 YLSNLNDLNATKKIIEELRDVLEEAGNVTPVHGKYYMLA 165
>AY052072-1|AAK93496.1| 2409|Drosophila melanogaster SD02860p
protein.
Length = 2409
Score = 30.3 bits (65), Expect = 0.88
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -3
Query: 357 IVRELESHHQHLRVYFLNVQLFSRLHHNHSAVQC 256
+VR+L S H +L +++VQL + + H+ +A+ C
Sbjct: 527 VVRQLLSPHDYLDYAYISVQLSTNIIHDTTALSC 560
>AE014296-1580|AAF50319.3| 2786|Drosophila melanogaster CG4821-PA,
isoform A protein.
Length = 2786
Score = 30.3 bits (65), Expect = 0.88
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -3
Query: 357 IVRELESHHQHLRVYFLNVQLFSRLHHNHSAVQC 256
+VR+L S H +L +++VQL + + H+ +A+ C
Sbjct: 903 VVRQLLSPHDYLDYAYISVQLSTNIIHDTTALSC 936
>BT023498-1|AAY84898.1| 1190|Drosophila melanogaster LD32453p
protein.
Length = 1190
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 LSLVEIIAHIVEQYVNKRDAV-TFLEKVETKVK 207
LS+VE A QY KRDA T +EK ETKV+
Sbjct: 173 LSMVEEAAG-TSQYKTKRDATKTLIEKKETKVR 204
>BT012342-1|AAS77467.1| 372|Drosophila melanogaster AT10870p
protein.
Length = 372
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +1
Query: 55 NLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALC 234
N + N+F +E K+ ++L ++ + V N+ +TF E V+ ++
Sbjct: 200 NWLSRQNSFFGNYERKVTTMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVA 259
Query: 235 KVLQGQITL 261
Q +T+
Sbjct: 260 ATTQKWVTI 268
>AY128454-1|AAM75047.1| 1018|Drosophila melanogaster LP08082p protein.
Length = 1018
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +1
Query: 55 NLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALC 234
N + N+F +E K+ ++L ++ + V N+ +TF E V+ ++
Sbjct: 833 NWLSRQNSFFGNYERKVTTMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVA 892
Query: 235 KVLQGQITL 261
Q +T+
Sbjct: 893 ATTQKWVTI 901
>AF245516-1|AAF73427.1| 1018|Drosophila melanogaster Ran binding
protein 9 protein.
Length = 1018
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +1
Query: 55 NLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALC 234
N + N+F +E K+ ++L ++ + V N+ +TF E V+ ++
Sbjct: 833 NWLSRQNSFFGNYERKVTTMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVA 892
Query: 235 KVLQGQITL 261
Q +T+
Sbjct: 893 ATTQKWVTI 901
>AF179287-1|AAD52673.1| 1179|Drosophila melanogaster SMC2 protein.
Length = 1179
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 LSLVEIIAHIVEQYVNKRDAV-TFLEKVETKVK 207
LS+VE A QY KRDA T +EK ETKV+
Sbjct: 162 LSMVEEAAG-TSQYKTKRDATKTLIEKKETKVR 193
>AE014297-1291|AAF54632.1| 1018|Drosophila melanogaster CG5252-PA
protein.
Length = 1018
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/69 (20%), Positives = 30/69 (43%)
Frame = +1
Query: 55 NLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVETKVKMNDEALALC 234
N + N+F +E K+ ++L ++ + V N+ +TF E V+ ++
Sbjct: 833 NWLSRQNSFFGNYERKVTTMALCKLFEYGVATQDNRLTTITFKELVDDPTDTRRRTRSVA 892
Query: 235 KVLQGQITL 261
Q +T+
Sbjct: 893 ATTQKWVTI 901
>AE013599-1965|AAF58197.1| 1179|Drosophila melanogaster CG10212-PA
protein.
Length = 1179
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/33 (54%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 112 LSLVEIIAHIVEQYVNKRDAV-TFLEKVETKVK 207
LS+VE A QY KRDA T +EK ETKV+
Sbjct: 162 LSMVEEAAG-TSQYKTKRDATKTLIEKKETKVR 193
>BT021424-1|AAX33572.1| 1227|Drosophila melanogaster LD01809p protein.
Length = 1227
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 39 PAEGRQPHTVVQ*LFDHLRKQNKSPIIG*DHCSYRGT 149
P R+ + Q L H+R +N P+ G DH SYR +
Sbjct: 1141 PFTSREDYDFFQHLEMHMRNENP-PLCGRDHLSYRSS 1176
>BT021338-1|AAX33486.1| 1227|Drosophila melanogaster RE01065p protein.
Length = 1227
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 39 PAEGRQPHTVVQ*LFDHLRKQNKSPIIG*DHCSYRGT 149
P R+ + Q L H+R +N P+ G DH SYR +
Sbjct: 1141 PFTSREDYDFFQHLEMHMRNENP-PLCGRDHLSYRSS 1176
>AY069239-1|AAL39384.1| 688|Drosophila melanogaster GM01240p
protein.
Length = 688
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 39 PAEGRQPHTVVQ*LFDHLRKQNKSPIIG*DHCSYRGT 149
P R+ + Q L H+R +N P+ G DH SYR +
Sbjct: 602 PFTSREDYDFFQHLEMHMRNENP-PLCGRDHLSYRSS 637
>AE014296-140|AAN11452.1| 688|Drosophila melanogaster CG13900-PB,
isoform B protein.
Length = 688
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 39 PAEGRQPHTVVQ*LFDHLRKQNKSPIIG*DHCSYRGT 149
P R+ + Q L H+R +N P+ G DH SYR +
Sbjct: 602 PFTSREDYDFFQHLEMHMRNENP-PLCGRDHLSYRSS 637
>AE014296-139|AAF47416.2| 1227|Drosophila melanogaster CG13900-PA,
isoform A protein.
Length = 1227
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 39 PAEGRQPHTVVQ*LFDHLRKQNKSPIIG*DHCSYRGT 149
P R+ + Q L H+R +N P+ G DH SYR +
Sbjct: 1141 PFTSREDYDFFQHLEMHMRNENP-PLCGRDHLSYRSS 1176
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,852,830
Number of Sequences: 53049
Number of extensions: 326091
Number of successful extensions: 888
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1024276155
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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