Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30026X
         (380 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical pr...    44   5e-05
AF188750-1|AAF00547.1|  293|Caenorhabditis elegans putative tyro...    33   0.091
AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical ...    29   1.1  
U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z49127-8|CAD56567.1|  183|Caenorhabditis elegans Hypothetical pr...    28   2.0  
AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical...    28   2.6  
AC024882-8|AAF60931.2|  340|Caenorhabditis elegans Seven tm rece...    27   3.4  
Z93383-12|CAB07628.2|  283|Caenorhabditis elegans Hypothetical p...    27   4.5  
Z81041-7|CAE17709.1|   95|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z30662-6|CAE17936.1|  295|Caenorhabditis elegans Hypothetical pr...    27   4.5  
Z92806-1|CAB07258.1|  802|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AC006717-2|AAK84582.1|  136|Caenorhabditis elegans Hypothetical ...    26   7.9  

>Z49130-6|CAA88971.1|  387|Caenorhabditis elegans Hypothetical
           protein T06D8.8 protein.
          Length = 387

 Score = 43.6 bits (98), Expect = 5e-05
 Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
 Frame = +1

Query: 1   LTLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLVEIIAHIVEQYV--NKRDAV 174
           LT+  +  VK P      ++ + Y  F+  +E ++NPL LVEI   I +     +K+ ++
Sbjct: 37  LTVLTRSLVKKPQFVASTDMHEFYRLFVAEWELRVNPLQLVEICISIAQNIATKDKQKSM 96

Query: 175 TFLEKVETKVKMNDEALALCKVLQGQI 255
            FL K+   +  N + +A+ ++  G+I
Sbjct: 97  EFLSKIGNVI--NKDKIAVARLHTGEI 121


>AF188750-1|AAF00547.1|  293|Caenorhabditis elegans putative
           tyrosine kinase receptorW04G5.6B protein.
          Length = 293

 Score = 32.7 bits (71), Expect = 0.091
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +1

Query: 76  NFLTTFESKINPLSLVEIIAHIVEQYVNKRDAVTFLEKVE-TKVKMNDEALALCK 237
           N + + E   N LSLV ++  IV +YV   D + FL K +  K  +  +  +LCK
Sbjct: 93  NVMCSMEKHPNILSLVGVVTMIVTEYVEDGDLLKFLRKCKFDKDSVKLDEKSLCK 147


>AC024882-9|AAF60930.2|  341|Caenorhabditis elegans Hypothetical
           protein Y9C9A.5 protein.
          Length = 341

 Score = 29.1 bits (62), Expect = 1.1
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -3

Query: 366 TYKIVRELESHHQHLRVYFLNVQLFSRL 283
           TYK+VREL  H +    Y L  QLF  L
Sbjct: 225 TYKLVRELSKHGESEYTYKLQSQLFRAL 252


>U41036-4|AAT92061.1| 1018|Caenorhabditis elegans Hypothetical
           protein T14E8.1c protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 139 IVEQYVNKRDAVTFLEKVETKVKMND 216
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U41036-3|AAL06055.1| 1030|Caenorhabditis elegans Hypothetical
           protein T14E8.1b protein.
          Length = 1030

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 139 IVEQYVNKRDAVTFLEKVETKVKMND 216
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>U41036-2|AAA82385.2| 1086|Caenorhabditis elegans Hypothetical
           protein T14E8.1a protein.
          Length = 1086

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +1

Query: 139 IVEQYVNKRDAVTFLEKVETKVKMND 216
           I+ +Y+ K D  +F+E VE  +KM D
Sbjct: 809 IITEYMAKGDLKSFIENVENTIKMRD 834


>Z49127-8|CAD56567.1|  183|Caenorhabditis elegans Hypothetical
           protein F13D12.10 protein.
          Length = 183

 Score = 28.3 bits (60), Expect = 2.0
 Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
 Frame = -1

Query: 332 ISIFECTF*MFNYFLGCIIIIQLFNVICPCSTLHRASASSFILTFVSTFSRNVTASL-LL 156
           I  F   F  F Y +G   +++   V  P  TL     ++F +  V  +   + +   L+
Sbjct: 56  IFTFHSLFTTF-YIIGAFRLVECLMV--PWLTLQLIFLTTFAMFVVVWWIATLLSIFNLV 112

Query: 155 TYCSTI*AMISTNDRGFILLSKVVKKLLYNCMRLSPLCRAGFLT 24
            Y  T      TN   F+L   V+  +L+ CM+LS +   GF++
Sbjct: 113 QYYHTPSDQGLTNAEFFVLTGIVLTLVLFLCMKLSHILYKGFVS 156


>AC024791-24|AAF60656.1|  627|Caenorhabditis elegans Hypothetical
           protein Y47G6A.4 protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 15/30 (50%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = +3

Query: 33  SGPAEGRQPHTVVQ*LFDHLRKQN-KSPII 119
           +GPA+G +P+ V + L  HL KQ+ KSPI+
Sbjct: 279 NGPADGCEPYEVFEWL-QHLLKQHPKSPIL 307


>AC024882-8|AAF60931.2|  340|Caenorhabditis elegans Seven tm
           receptor protein 168 protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 3.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -3

Query: 366 TYKIVRELESHHQHLRVYFLNVQLFSRL 283
           +YK+VREL  H +    Y L  QLF  L
Sbjct: 225 SYKLVRELPKHGESEYTYKLQSQLFKAL 252


>Z93383-12|CAB07628.2|  283|Caenorhabditis elegans Hypothetical
           protein F54B8.7a protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = -1

Query: 296 YFLGCIIII-QLFNVICPCST-LHRASASSFILTFVSTFSRNVTASLLLTYC 147
           Y LG +I   +L  +  P S  LHR   S + + F+  FS      +L  YC
Sbjct: 96  YTLGFLITFDRLLAIYFPISYHLHRQKVSIYFIIFILIFSAAFNQYVLFGYC 147


>Z81041-7|CAE17709.1|   95|Caenorhabditis elegans Hypothetical
           protein C27A7.9 protein.
          Length = 95

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 11  NCKNSSRIRPCRGETTSYSCT 73
           NC N +R R C  +T S  CT
Sbjct: 39  NCGNQTRARSCSSQTASCICT 59


>Z30662-6|CAE17936.1|  295|Caenorhabditis elegans Hypothetical
           protein T16H12.11 protein.
          Length = 295

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
 Frame = +1

Query: 4   TLKLQEFVKNPALQRGDNLIQLYNNFLTTFESKINPLSLV-EIIAHIVEQYVNKRDAVTF 180
           T +++  ++   ++     I ++N  +  F S  N    V E IAH +E+  NK+DA   
Sbjct: 161 TKRIEHVLRQDIIREIGVAIDVHNLKIDDFRSHSNNTERVAEGIAHAIEESKNKQDAGNQ 220

Query: 181 LEKV 192
           L+ V
Sbjct: 221 LKHV 224


>Z92806-1|CAB07258.1|  802|Caenorhabditis elegans Hypothetical
           protein K10G4.1 protein.
          Length = 802

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -3

Query: 357 IVRELESHHQHLRVYFLNVQLFSR 286
           IV  LE  H  LRV+FL V  + R
Sbjct: 229 IVEMLEKRHHKLRVHFLEVYFWKR 252


>AC006717-2|AAK84582.1|  136|Caenorhabditis elegans Hypothetical
           protein Y14H12A.1 protein.
          Length = 136

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 296 YFLGCII-IIQLFNVICPCSTLHRASASSFILTFVSTFSRNV 174
           +FL  ++ I  +F++IC      R S   F++TFV  F   V
Sbjct: 46  FFLAILVSICVIFSLICIMCHSSRWSKIGFVITFVMAFITGV 87


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,619,807
Number of Sequences: 27780
Number of extensions: 165324
Number of successful extensions: 536
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)