Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30024
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    31   0.039
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   1.9  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   3.3  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    24   5.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   7.7  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    23   7.7  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    23   7.7  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 31.1 bits (67), Expect = 0.039
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
 Frame = +1

Query: 340 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQ-QSLL---QDHVHR 507
           Q  +Q+   RPQ  RP + +    R  QR+  +  L+EV P  G+  +SLL   Q  V  
Sbjct: 463 QQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPELIEVSPNEGQDWESLLLLVQTAVRT 522

Query: 508 DKQYLKL 528
           D++Y  L
Sbjct: 523 DERYKPL 529



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 340 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDHVHRDKQ 516
           Q  +Q+   R Q  R  + QQ      QRQ QQ+   +   +  +QQ   Q   H+ +Q
Sbjct: 313 QQQQQQQQQRQQQQRQQQRQQQ-----QRQQQQQQQQQQRQQQQRQQQQQQQQQHQQQQ 366


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 683 MKIWPPTKTVKPWG 724
           M+++PPTK V P+G
Sbjct: 315 MRVYPPTKIVTPYG 328


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +1

Query: 220 SKTARGTPWTS-PPVMDKGWKGNRQILLPHP 309
           S T  G P T+ PP  D    G R   +PHP
Sbjct: 451 STTTEGNPGTTRPPSGDGPCAGGRYGFVPHP 481


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +2

Query: 65  LTPHLHQELMTYWR 106
           L P  HQE MT WR
Sbjct: 100 LAPMSHQETMTLWR 113


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +1

Query: 340 QAHKQKGPSRPQVDRPTKPQQNCIR*LQRQNQQESLLEVYPRVGKQQSLLQDHVHRDKQ 516
           Q  +Q+   +    R  + QQ   +  Q+Q QQ+       R  +QQ   Q H  R++Q
Sbjct: 218 QQQEQRQQQQQHQQREQQQQQQQQQ-QQQQQQQQQQQRNQQREWQQQQQQQQHQQREQQ 275


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 72  GVRSQRTHGEDEGKQSQSH 16
           G+R +RT GED  K  Q H
Sbjct: 284 GIRGRRTDGEDLIKHWQHH 302


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 114 YMSVVIGEYETAIAKCSEYLKEKKGEV 194
           YM  +I + E    +C + LKEK  +V
Sbjct: 550 YMEAIIVDTEKTARRCIQILKEKMLDV 576


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 796,888
Number of Sequences: 2352
Number of extensions: 17130
Number of successful extensions: 74
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)