Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30016
(713 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 153 8e-38
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 152 3e-37
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 151 4e-37
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 63 2e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 62 4e-10
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 62 4e-10
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 61 6e-10
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 59 3e-09
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 59 3e-09
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 59 3e-09
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 57 1e-08
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 57 1e-08
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 57 1e-08
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 56 2e-08
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 56 2e-08
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 56 2e-08
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 56 2e-08
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 56 2e-08
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 56 2e-08
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 55 4e-08
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 55 4e-08
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 55 4e-08
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 55 4e-08
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 55 4e-08
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 54 1e-07
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 54 1e-07
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 53 2e-07
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 53 2e-07
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 53 2e-07
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 53 2e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 53 2e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 52 3e-07
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 52 3e-07
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 52 3e-07
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 52 5e-07
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 51 7e-07
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 51 7e-07
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 51 7e-07
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 51 7e-07
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 50 1e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 50 2e-06
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 50 2e-06
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 50 2e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 49 3e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 49 3e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 49 3e-06
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 49 4e-06
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 49 4e-06
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 49 4e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 49 4e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 49 4e-06
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 48 5e-06
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 48 5e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 48 6e-06
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 48 6e-06
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 48 6e-06
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 48 8e-06
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 48 8e-06
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 47 1e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 47 1e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 47 1e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 47 1e-05
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 46 2e-05
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 46 2e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 46 2e-05
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 46 2e-05
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 46 2e-05
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 46 3e-05
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 45 4e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 45 6e-05
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 45 6e-05
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 45 6e-05
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 45 6e-05
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 45 6e-05
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 44 8e-05
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 44 8e-05
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 44 1e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 44 1e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 44 1e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 44 1e-04
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 44 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 1e-04
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 43 2e-04
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 43 2e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 43 2e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 43 2e-04
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 43 2e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 43 2e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 42 3e-04
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 42 3e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 42 4e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 4e-04
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 42 4e-04
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 42 4e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 42 4e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 42 4e-04
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 42 5e-04
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 42 5e-04
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 42 5e-04
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 42 5e-04
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 42 5e-04
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 42 5e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 42 5e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 41 7e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 41 0.001
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 41 0.001
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 41 0.001
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 40 0.001
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 40 0.001
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 40 0.001
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 40 0.002
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 40 0.002
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 40 0.002
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 40 0.002
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 40 0.002
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 40 0.002
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.004
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 39 0.004
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 38 0.005
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 38 0.007
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 38 0.007
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 38 0.007
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 38 0.007
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 38 0.009
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 38 0.009
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 38 0.009
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 37 0.012
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 37 0.012
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 37 0.012
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.015
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.015
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 37 0.015
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 36 0.020
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 36 0.020
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 36 0.020
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.020
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 36 0.020
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 36 0.020
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 36 0.020
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 36 0.020
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 36 0.020
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 36 0.027
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.027
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.027
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 36 0.027
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 36 0.027
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 36 0.035
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 36 0.035
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 35 0.047
At2g47790.1 68415.m05965 transducin family protein / WD-40 repea... 35 0.047
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 35 0.062
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 35 0.062
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 35 0.062
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 35 0.062
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 34 0.081
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 34 0.081
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 34 0.081
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.081
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.081
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.081
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 34 0.11
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 34 0.11
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.11
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.11
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 33 0.14
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 33 0.14
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 33 0.14
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 33 0.14
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 33 0.19
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 33 0.19
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.19
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.19
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.19
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.25
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 33 0.25
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.25
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 33 0.25
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 32 0.33
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 32 0.33
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 32 0.33
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 32 0.33
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 32 0.43
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.43
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 31 0.57
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 31 0.57
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 31 0.76
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 31 0.76
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 31 0.76
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.76
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 31 0.76
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 31 1.0
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 31 1.0
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 31 1.0
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 30 1.3
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 30 1.3
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 1.3
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 30 1.3
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 30 1.3
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 30 1.3
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 30 1.8
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 30 1.8
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 30 1.8
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 29 2.3
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 2.3
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 29 2.3
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 29 2.3
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 4.0
At5g13850.1 68418.m01619 nascent polypeptide-associated complex ... 28 5.3
At3g12390.1 68416.m01544 nascent polypeptide associated complex ... 28 5.3
At1g27470.1 68414.m03349 transducin-related / WD-40 repeat prote... 28 5.3
At5g59120.1 68418.m07409 subtilase family protein contains simil... 28 7.1
At5g59110.1 68418.m07407 subtilisin-like serine protease-related... 28 7.1
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 28 7.1
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 28 7.1
At5g01290.1 68418.m00039 mRNA capping enzyme family protein simi... 28 7.1
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 7.1
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 7.1
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 7.1
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 7.1
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 28 7.1
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 28 7.1
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 28 7.1
At4g10480.1 68417.m01720 nascent polypeptide associated complex ... 27 9.3
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 9.3
At2g35510.1 68415.m04349 WWE domain-containing protein contains ... 27 9.3
At1g71310.3 68414.m08231 expressed protein 27 9.3
At1g71310.2 68414.m08230 expressed protein 27 9.3
At1g71310.1 68414.m08229 expressed protein 27 9.3
At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A... 27 9.3
At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A... 27 9.3
At1g33040.1 68414.m04068 nascent polypeptide-associated complex ... 27 9.3
At1g26330.1 68414.m03211 hypothetical protein 27 9.3
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 27 9.3
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 153 bits (372), Expect = 8e-38
Identities = 71/94 (75%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS SRD+TIKL
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 434 WNTLAECKYTIQD-DGHSDWVSCVRFHP--IMPT 526
WNTL ECKYTI + DGH +WVSCVRF P ++PT
Sbjct: 132 WNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPT 165
Score = 105 bits (252), Expect = 3e-23
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +1
Query: 493 VMC-QIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 669
V C + PN P IVS WD+TVKVW+L NCKL+ + +GHSGYLNTV VSPDGSLCASG
Sbjct: 152 VSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASG 211
Query: 670 GKDMKAMLWDLNDG 711
GKD +LWDL +G
Sbjct: 212 GKDGVILLWDLAEG 225
Score = 86.6 bits (205), Expect = 1e-17
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +3
Query: 42 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 221
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 222 GHSHFISDVVL 254
GHSHF+ DVVL
Sbjct: 61 GHSHFVEDVVL 71
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDK 421
++D +S S D+T++LW+ L K T + H + V V FS + IVS S DK
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
T+K+WN L CK GHS +++ V P
Sbjct: 174 TVKVWN-LQNCKLRNSLVGHSGYLNTVAVSP 203
Score = 44.8 bits (101), Expect = 6e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 455 K 457
K
Sbjct: 226 K 226
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 511 PNHANPIIVSCGWDRTVKVWHLTNCKLKINHL-----GHSGYLNTVTVSPDGSLCASGGK 675
P + IIV+ D+++ +W LT GHS ++ V +S DG SG
Sbjct: 24 PIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW 83
Query: 676 DMKAMLWDLNDG 711
D + LWDL G
Sbjct: 84 DGELRLWDLATG 95
Score = 37.5 bits (83), Expect = 0.009
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +2
Query: 275 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
++ S DK++ LW D + G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 440 TLAECKYTIQDDGHSDWVSCVRF 508
LA + T + GH+ V V F
Sbjct: 92 -LATGETTRRFVGHTKDVLSVAF 113
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I++W+
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRIWD 261
Query: 440 TLAECKYTIQD 472
E K ++D
Sbjct: 262 --LESKSVVED 270
Score = 34.7 bits (76), Expect = 0.062
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +3
Query: 48 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 203
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWH-LTNCKLKINH-LGHSGYLNTVTVSPDGSL--CASGGKDMKAM 690
N IVS DRT+K+W+ L CK I+ GH +++ V SP+ + S D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 691 LWDLND 708
+W+L +
Sbjct: 177 VWNLQN 182
Score = 32.3 bits (70), Expect = 0.33
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCV 502
HT V ++A +DN I V+ SRDK+I LW + K Y + GHS +V V
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
+S WD +++W L + +GH+ + +V S D S +D LW+
Sbjct: 79 LSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 254
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTVAV 201
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 152 bits (368), Expect = 3e-37
Identities = 70/94 (74%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQIVS SRD+TIKL
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 434 WNTLAECKYTIQD-DGHSDWVSCVRFHP--IMPT 526
WNTL ECKYTI + DGH +WVSCVRF P ++PT
Sbjct: 132 WNTLGECKYTISEADGHKEWVSCVRFSPNTLVPT 165
Score = 104 bits (249), Expect = 7e-23
Identities = 48/74 (64%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
Frame = +1
Query: 493 VMC-QIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 669
V C + PN P IVS WD+TVKVW+L NCKL+ GHSGYLNTV VSPDGSLCASG
Sbjct: 152 VSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASG 211
Query: 670 GKDMKAMLWDLNDG 711
GKD +LWDL +G
Sbjct: 212 GKDGVILLWDLAEG 225
Score = 85.8 bits (203), Expect = 3e-17
Identities = 37/71 (52%), Positives = 54/71 (76%)
Frame = +3
Query: 42 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 221
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 222 GHSHFISDVVL 254
GHSHF+ DVVL
Sbjct: 61 GHSHFVQDVVL 71
Score = 47.6 bits (108), Expect = 8e-06
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSGSRDK 421
++D +S S D+T++LW+ L K T + H + V V FS + IVS S DK
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
T+K+WN L CK GHS +++ V P
Sbjct: 174 TVKVWN-LQNCKLRNTLAGHSGYLNTVAVSP 203
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+S SWDKT+++W+L K H+ + +VA S D SG +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 455 K 457
K
Sbjct: 226 K 226
Score = 37.9 bits (84), Expect = 0.007
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Frame = +2
Query: 275 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
++ S DK++ LW D + G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWD 91
Query: 440 TLAECKYTIQDDGHSDWVSCVRF 508
LA + T + GH+ V V F
Sbjct: 92 -LATGESTRRFVGHTKDVLSVAF 113
Score = 37.5 bits (83), Expect = 0.009
Identities = 22/72 (30%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +1
Query: 511 PNHANPIIVSCGWDRTVKVWHLTNCKLKIN-----HLGHSGYLNTVTVSPDGSLCASGGK 675
P + +IV+ D+++ +W LT GHS ++ V +S DG SG
Sbjct: 24 PVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSW 83
Query: 676 DMKAMLWDLNDG 711
D + LWDL G
Sbjct: 84 DGELRLWDLATG 95
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 48 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 203
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG+ SG D + LWDLA GK E + + S+ FS NR + + + +I++W+
Sbjct: 204 DGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRIWD 261
Query: 440 TLAECKYTIQD 472
E K ++D
Sbjct: 262 --LESKSVVED 270
Score = 35.1 bits (77), Expect = 0.047
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWH-LTNCKLKINHL-GHSGYLNTVTVSPDGSL--CASGGKDMKAM 690
N IVS DRT+K+W+ L CK I+ GH +++ V SP+ + S D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVK 176
Query: 691 LWDLND 708
+W+L +
Sbjct: 177 VWNLQN 182
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCV 502
HT V ++A VDN IV+ SRDK+I LW E K Y + GHS +V V
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
+S WD +++W L + +GH+ + +V S D S +D LW+
Sbjct: 79 LSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 78 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVL 254
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V +
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTVAV 201
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 151 bits (366), Expect = 4e-37
Identities = 71/95 (74%), Positives = 79/95 (83%), Gaps = 4/95 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS SRD+TIKL
Sbjct: 72 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 131
Query: 434 WNTLAECKYTIQD--DGHSDWVSCVRFHP--IMPT 526
WNTL ECKYTI + +GH DWVSCVRF P + PT
Sbjct: 132 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 166
Score = 102 bits (245), Expect = 2e-22
Identities = 45/74 (60%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +1
Query: 493 VMC-QIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASG 669
V C + PN P IVS WD+TVKVW+L+NCKL+ GH+GY++TV VSPDGSLCASG
Sbjct: 153 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASG 212
Query: 670 GKDMKAMLWDLNDG 711
GKD +LWDL +G
Sbjct: 213 GKDGVVLLWDLAEG 226
Score = 89.8 bits (213), Expect = 2e-18
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +3
Query: 42 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 221
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 222 GHSHFISDVVL 254
GHSHF+ DVVL
Sbjct: 61 GHSHFVEDVVL 71
Score = 50.0 bits (114), Expect = 2e-06
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWD-LAAGKTT--RRFEDHTKDVLSVAFSVDNRQ--IVSGSRDKT 424
D +S S D+T++LW+ L K T E H V V FS + Q IVS S DKT
Sbjct: 116 DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKT 175
Query: 425 IKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+K+WN L+ CK GH+ +VS V P
Sbjct: 176 VKVWN-LSNCKLRSTLAGHTGYVSTVAVSP 204
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+S SWDKT+++W+L+ K HT V +VA S D SG +D + LW+ LAE
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEG 226
Query: 455 K 457
K
Sbjct: 227 K 227
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCK-----LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
IIVS D+++ +W LT + GHS ++ V +S DG SG D + L
Sbjct: 30 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 89
Query: 694 WDLNDG 711
WDL G
Sbjct: 90 WDLAAG 95
Score = 38.7 bits (86), Expect = 0.004
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 5/83 (6%)
Frame = +2
Query: 275 LSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+S S DK++ LW D A G RR H+ V V S D + +SGS D ++LW+
Sbjct: 32 VSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 440 TLAECKYTIQDDGHSDWVSCVRF 508
LA T + GH+ V V F
Sbjct: 92 -LAAGVSTRRFVGHTKDVLSVAF 113
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 203
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG+ SG D + LWDLA GK E ++ + ++ FS NR + + + IK+W+
Sbjct: 205 DGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFS-PNRYWLCAATEHGIKIWD 262
Query: 440 TLAECKYTIQD 472
E K ++D
Sbjct: 263 --LESKSIVED 271
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQI-VSGSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCV 502
HT V ++A +DN I VS SRDK+I LW + K Y + GHS +V V
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWH-LTNCKLKINH--LGHSGYLNTVTVSPD--GSLCASGGKDMKA 687
N IVS DRT+K+W+ L CK I+ GH +++ V SP+ S D
Sbjct: 117 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTV 176
Query: 688 MLWDLND 708
+W+L++
Sbjct: 177 KVWNLSN 183
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +3
Query: 3 RFRESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLT 179
R R L+ + T+ G GH WV+ + +P I+S+S DKT+ VW L+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 180 RDENNYGIPQKRLYGHSHFISDVVL 254
+ + L GH+ ++S V +
Sbjct: 183 NCK-----LRSTLAGHTGYVSTVAV 202
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/55 (25%), Positives = 24/55 (43%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
+S WD +++W L +GH+ + +V S D S +D LW+
Sbjct: 79 LSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 133
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + S S+DK++RLW+ G+ F H V V++S D+R ++SGS+D T+K+W
Sbjct: 371 DGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWE 430
Query: 440 TLAECKYTIQD-DGHSDWVSCVRFHP 514
K QD GH+D V V + P
Sbjct: 431 --IRTKKLKQDLPGHADEVFAVDWSP 454
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/86 (34%), Positives = 42/86 (48%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG SGS D T+RLWDL + H VL+VA+S D + +VSGS+ I WN
Sbjct: 120 DGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWN 179
Query: 440 TLAECKYTIQDDGHSDWVSCVRFHPI 517
GH W++ + + P+
Sbjct: 180 PKKGELEGSPLTGHKKWITGISWEPV 205
Score = 55.2 bits (127), Expect = 4e-08
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
++D LSGS D TL++W++ K + H +V +V +S D ++VSG +D+ +KL
Sbjct: 411 SADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKL 470
Query: 434 W 436
W
Sbjct: 471 W 471
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRFHP 514
H + VL V+FS D +Q+ SGS D T++LW+ E +T + GH +WV V + P
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCK--GHKNWVLTVAWSP 161
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/70 (34%), Positives = 38/70 (54%)
Frame = +1
Query: 487 LGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCAS 666
+G + Q+ + + +++S D T+K+W + KLK + GH+ + V SPDG S
Sbjct: 402 VGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVS 461
Query: 667 GGKDMKAMLW 696
GGKD LW
Sbjct: 462 GGKDRVLKLW 471
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+SGS D T+ LW+ + K + R H + V V FS D + I S S DK+++LWN
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/74 (32%), Positives = 37/74 (50%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
++ S D R+WD+ K+ HT V V + D I +GS+D TIK+W T +
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWET-TQG 272
Query: 455 KYTIQDDGHSDWVS 496
K + GH W++
Sbjct: 273 KLIRELKGHGHWIN 286
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
I S +D++V++W+ + GH G + V+ S D L SG KD +W++
Sbjct: 375 IASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEI 431
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/60 (31%), Positives = 26/60 (43%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ S D TV++W L GH ++ TV SPDG SG K + W+ G
Sbjct: 124 LASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
GH+ + V+ SPDG ASG D LWDL
Sbjct: 107 GHAEAVLCVSFSPDGKQLASGSGDTTVRLWDL 138
Score = 31.9 bits (69), Expect = 0.43
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
+VS D T+ +W + K L GH +N V SPDG AS D LW+
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 75 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 206
RGH G V Q++ + ++LS S+D TL +W++ + +P
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 648
II + D T+K+W T KL GH ++N++ +S +
Sbjct: 254 IIYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLALSTE 293
Score = 28.3 bits (60), Expect(2) = 0.093
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +3
Query: 123 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 248
P+ ++S S D T+ +W+ + + P+KRL GH ++ V
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHV 366
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 69 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 248
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Score = 24.6 bits (51), Expect(2) = 0.093
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 39 KMSETL--KLRGTLRGHNGWVTQIATNPKY 122
KM ET KL L+GH W+ +A + +Y
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY 294
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 62.1 bits (144), Expect = 4e-10
Identities = 30/64 (46%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-T 442
NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + SG D TI +W+ +
Sbjct: 512 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 571
Query: 443 LAEC 454
A C
Sbjct: 572 TARC 575
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG Y SG D T+ +WDL+ + H V S+++S + + SGS D T+KLW+
Sbjct: 552 DGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWD 611
Query: 440 TLAECKYTIQDD--GHSDWVSCVRFHPIMPTPL 532
+ K T ++ G+S+ + +R P TP+
Sbjct: 612 VTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 517 HANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
H N ++ G D+TV++W + + +GH + ++ +SPDG ASG +D M+
Sbjct: 508 HPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMM 567
Query: 694 WDLN 705
WDL+
Sbjct: 568 WDLS 571
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
D T+ +W L+ + +GH+ + +++ S +GSL ASG D LWD+
Sbjct: 562 DGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDV 612
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
G++ LS S D T+RLW ++ H V FS S S D+T ++W+
Sbjct: 430 GDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWS 488
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G+Y S S D+T R+W + + R H D V + + I +GS DKT++LW+
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVRLWDV 528
Query: 443 -LAEC 454
EC
Sbjct: 529 QTGEC 533
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 538 SCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
SC DRT ++W + + L+I +G+L+ V P+ + A+G D LWD+ G
Sbjct: 477 SCSHDRTARIWSMDRIQPLRIM----AGHLSDVDWHPNCNYIATGSSDKTVRLWDVQTG 531
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
H+G LN ++S DGSL A G D +WD+
Sbjct: 352 HNG-LNCSSISHDGSLVAGGFSDSSIKVWDM 381
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 604 LGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
LGHSG + + T SP G S D LW
Sbjct: 415 LGHSGPVYSATFSPPGDFVLSSSADTTIRLW 445
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 191
L GH+G V +P D +LSSS D T+ +W + N
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNAN 452
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 62.1 bits (144), Expect = 4e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SD + +S S DKTL+LWD+ G + HT V F+ + IVSGS D+T+++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 434 WN-TLAECKYTIQDDGHSDWVSCVRFH 511
W+ T +C + HSD V+ V F+
Sbjct: 140 WDVTTGKCLKVL--PAHSDPVTAVDFN 164
Score = 59.7 bits (138), Expect = 2e-09
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT- 442
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVS S D ++W++
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
C T+ DD + VS VRF P
Sbjct: 186 TGHCVKTLIDDENPP-VSFVRFSP 208
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQIVSGSRDKTIK 430
+G + L G+ D TLRLW++++ K + + H + +S AFSV N ++IVSGS D +
Sbjct: 209 NGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVH 268
Query: 431 LWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+W L K + +GH++ V V HP
Sbjct: 269 MWE-LNSKKLLQKLEGHTETVMNVACHP 295
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 418
+SDG S S DKT+R + + + + F H + VAFS D R IVS S D
Sbjct: 33 SSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDD 92
Query: 419 KTIKLWNTLAECKYTIQD-DGHSDWVSCVRFHP 514
KT+KLW+ E I+ GH+++ CV F+P
Sbjct: 93 KTLKLWD--VETGSLIKTLIGHTNYAFCVNFNP 123
Score = 52.8 bits (121), Expect = 2e-07
Identities = 23/67 (34%), Positives = 39/67 (58%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
+ ++G +SGS D + +W+L + K ++ E HT+ V++VA I SGS DKT++
Sbjct: 251 SVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVR 310
Query: 431 LWNTLAE 451
+W E
Sbjct: 311 IWTQKKE 317
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
DG+ +S S+D R+WD G + +D V V FS + + I+ G+ D T++LW
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Query: 437 NTLAECKYTIQDDGHSDWVSCV 502
N ++ K+ GH + C+
Sbjct: 226 N-ISSAKFLKTYTGHVNAQYCI 246
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
IVS D+T+K+W + L +GH+ Y V +P ++ SG D +WD+ G
Sbjct: 86 IVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTG 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/66 (33%), Positives = 31/66 (46%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N + +IVS +D TV++W +T K HS + V + DGSL S D +
Sbjct: 122 NPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRI 181
Query: 694 WDLNDG 711
WD G
Sbjct: 182 WDSGTG 187
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
IVS D V +W L + KL GH+ + V P +L ASG D +W
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 48 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
ET L TL GH + + NP+ +MI+S S D+T+ +W +T
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVT 143
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGH--SGY-LNTVTVSPDGSLCASGGKDMKAMLWDLN 705
D T+++W++++ K + GH + Y +++ +G SG +D +W+LN
Sbjct: 219 DNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELN 273
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 69 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 248
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 61.3 bits (142), Expect = 6e-10
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 445
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS S D + K+W+
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 446 -AECKYTIQDDGHSDWVSCVRFHP 514
C T+ DD S VS +F P
Sbjct: 201 EGTCLKTLIDD-KSPAVSFAKFSP 223
Score = 60.9 bits (141), Expect = 8e-10
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
++DGN S S DKT+ LW R+E H+ + +A+S D+ S S D T+++
Sbjct: 52 SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRI 111
Query: 434 WNTLA--ECKYTIQDDGHSDWVSCVRFHP 514
W+ + EC ++ GH+++V CV F+P
Sbjct: 112 WDARSPYECLKVLR--GHTNFVFCVNFNP 138
Score = 54.0 bits (124), Expect = 9e-08
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSGSRDKTIK 430
+G + L + D TL+L + A GK + + HT V + AFSV N + IVSGS D +
Sbjct: 224 NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVY 283
Query: 431 LWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
LW+ A + +GH+D V V HP+
Sbjct: 284 LWDLQAR-NILQRLEGHTDAVISVSCHPV 311
Score = 50.8 bits (116), Expect = 9e-07
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
+SD +Y S S D TLR+WD + + + HT V V F+ + IVSGS D+TI+
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153
Query: 431 LWNT-LAECKYTIQDDGHSDWVSCVRFH 511
+W +C I+ HS +S V F+
Sbjct: 154 IWEVKTGKCVRMIK--AHSMPISSVHFN 179
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSR-DKT 424
+ ++G Y +SGS D + LWDL A +R E HT V+SV+ V N SG+ DKT
Sbjct: 266 SVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKT 325
Query: 425 IKLW 436
I++W
Sbjct: 326 IRIW 329
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N + +IVS +D T+++W + K HS +++V + DGSL S D +
Sbjct: 137 NPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKI 196
Query: 694 WDLNDG 711
WD +G
Sbjct: 197 WDAKEG 202
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSGSRDKTIKLW 436
DG+ +S S D + ++WD G + D +S A FS + + I+ + D T+KL
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS 240
Query: 437 NTLAECKYTIQDDGHSDWVSCV 502
N A K+ GH++ V C+
Sbjct: 241 N-YATGKFLKVYTGHTNKVFCI 261
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +1
Query: 493 VMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGG 672
+ C N N ++ S D+T+ +W TN L + GHS ++ + S D S
Sbjct: 46 ISCVKFSNDGN-LLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSAS 104
Query: 673 KDMKAMLWD 699
D +WD
Sbjct: 105 DDCTLRIWD 113
Score = 33.1 bits (72), Expect = 0.19
Identities = 30/97 (30%), Positives = 47/97 (48%)
Frame = +3
Query: 69 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 248
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISD- 90
Query: 249 VLLVTVITHFPVLGTRLCVCGISLQARLPDDSRTILR 359
L + +H+ + C I AR P + +LR
Sbjct: 91 -LAWSSDSHYTCSASDDCTLRI-WDARSPYECLKVLR 125
Score = 32.7 bits (71), Expect = 0.25
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVS 496
+ E HT + V FS D + S S DKT+ LW+ + +GHS +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGIS 89
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D T+++W + + L GH+ ++ V +P +L SG D +W++ G
Sbjct: 106 DCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTG 160
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
GH+ ++ V S DG+L AS D +LW
Sbjct: 41 GHTAAISCVKFSNDGNLLASASVDKTMILW 70
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 59.3 bits (137), Expect = 3e-09
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Frame = +2
Query: 218 IRSFALHF*CCAASD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 385
+R+F H C+A + G + SGS D LR+WD + ++ HT+ + ++ FS
Sbjct: 42 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP 101
Query: 386 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
D R +VSG D +K+W+ L K + H + + FHP+
Sbjct: 102 DGRWVVSGGLDNVVKVWD-LTAGKLLHEFKCHEGPIRSLDFHPL 144
Score = 54.0 bits (124), Expect = 9e-08
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Frame = +2
Query: 98 SNCN*SEI-PGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFA-LHF*CCAASDGNY 271
SNC+ E P + + +++ D R+K T K R + + F + DG +
Sbjct: 50 SNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF----SPDGRW 105
Query: 272 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 451
+SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+ L
Sbjct: 106 VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD-LET 164
Query: 452 CKYTIQDDGHSDWVSCVRFHP 514
+ + V + FHP
Sbjct: 165 FELIGTTRPEATGVRAIAFHP 185
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE- 451
L+G+ ++LWDL K R F H + +V F + SGS D +++W+T +
Sbjct: 23 LAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKG 82
Query: 452 CKYTIQDDGHSDWVSCVRFHP 514
C T + GH+ +S + F P
Sbjct: 83 CIQTYK--GHTRGISTIEFSP 101
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 106 VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
HT V SVAF+ + +++G+ IKLW+ L E K GH S V FHP
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D ++VW + GH+ ++T+ SPDG SGG D +WDL G
Sbjct: 70 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 123
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/62 (25%), Positives = 25/62 (40%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++++ +K+W L K+ GH + V P G ASG D +
Sbjct: 16 NSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRV 75
Query: 694 WD 699
WD
Sbjct: 76 WD 77
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 418
+GS D+T++ WDL + V ++AF D + + G D
Sbjct: 150 TGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDD 196
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AEC 454
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 494 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 553
Query: 455 KYTIQ 469
YTI+
Sbjct: 554 MYTIE 558
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D +G+ D +++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 360 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 419
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++ S WD TV++W + K + H+ + TV PDG AS D + WD +
Sbjct: 491 LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIE 550
Query: 709 G 711
G
Sbjct: 551 G 551
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 565 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
VW + GH +N VT SPD L A+G D K +W++ G
Sbjct: 333 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG 381
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AEC 454
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ S + D I W+T+
Sbjct: 534 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 593
Query: 455 KYTIQ 469
YTI+
Sbjct: 594 MYTIE 598
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D +G+ D +++W++ +G F +HT V ++ F DN ++S S D T++ W+
Sbjct: 400 DSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWD 459
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++ S WD TV++W + K + H+ + TV PDG AS D + WD +
Sbjct: 531 LLASSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIE 590
Query: 709 G 711
G
Sbjct: 591 G 591
Score = 35.5 bits (78), Expect = 0.035
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 565 VWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
VW + GH +N VT SPD L A+G D K +W++ G
Sbjct: 373 VWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG 421
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 57.2 bits (132), Expect = 1e-08
Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Frame = +2
Query: 140 FLSRQNSHRVEADQR----RKQLRYTSKAFIRSFALHF*CCA-ASDGNYALSGSWDKTLR 304
FLS+++ + +A R K +T +R+ CC +SDG S DK
Sbjct: 617 FLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAV 676
Query: 305 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK-YTIQD-DG 478
LW K E+HT + + FS ++ + S DKT+++W+ A+ K Y+++ G
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMG 734
Query: 479 HSDWVSCVRFHPI 517
HS V+ + FHPI
Sbjct: 735 HSSMVTSLDFHPI 747
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/66 (22%), Positives = 32/66 (48%)
Frame = +1
Query: 499 CQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 678
C P + + +++ C +++++W+++ K + H G + ++ VS L AS D
Sbjct: 868 CVFHPAYPSLLVIGCY--QSLELWNMSENKT-MTLPAHEGLITSLAVSTATGLVASASHD 924
Query: 679 MKAMLW 696
LW
Sbjct: 925 KLVKLW 930
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 640 SPDGSLCASGGKDMKAMLW 696
S DG + AS G D KA+LW
Sbjct: 660 SSDGKMLASAGHDKKAVLW 678
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
GH+ +N+V P G AS +DM +W L G
Sbjct: 816 GHANPINSVCWDPSGDFLASVSEDM-VKVWTLGTG 849
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 56.8 bits (131), Expect = 1e-08
Identities = 35/114 (30%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +2
Query: 176 DQRRKQLRYTSKAFIRSF-ALHF*CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
D R+K +T K R L F DG + +SG D +++WDL AGK F+ H
Sbjct: 222 DIRKKGCIHTYKGHTRGVNVLRF----TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Query: 353 TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+ S+ F + +GS DKT+K W+ L + + V C+ F+P
Sbjct: 278 EGKIQSLDFHPHEFLLATGSADKTVKFWD-LETFELIGSGGTETTGVRCLTFNP 330
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/84 (32%), Positives = 42/84 (50%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G + SGS D L++WD+ ++ HT+ V + F+ D R IVSG D +K+W+
Sbjct: 206 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD- 264
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
L K + H + + FHP
Sbjct: 265 LTAGKLLHEFKSHEGKIQSLDFHP 288
Score = 50.0 bits (114), Expect = 2e-06
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
AS+G A +G+ T++LWDL K R H + +SV F SGS D +K+
Sbjct: 162 ASEGLVA-AGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKI 220
Query: 434 WNTLAE-CKYTIQDDGHSDWVSCVRFHP 514
W+ + C +T + GH+ V+ +RF P
Sbjct: 221 WDIRKKGCIHTYK--GHTRGVNVLRFTP 246
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/57 (40%), Positives = 27/57 (47%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
IVS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 251 IVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDL 307
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K GH V FHP
Sbjct: 185 KVVRTLTGHRSNCVSVNFHP 204
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D +K+W + + GH+ +N + +PDG SGG+D +WDL G
Sbjct: 215 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAG 268
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++V+ G D V +W + ++ GHS +++VT L A+G LWDL +
Sbjct: 124 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEE 183
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +1
Query: 556 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
T+K+W L K+ GH +V P G ASG D +WD+
Sbjct: 175 TIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI 223
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+GS DKT++ WDL + T V + F+ D + ++ G ++ ++K+++
Sbjct: 295 TGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFS 347
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 56.8 bits (131), Expect = 1e-08
Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Frame = +2
Query: 218 IRSFALHF*CCAASD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 385
+R+F H C+A + G + SGS D L++WD+ + ++ H++ + ++ F+
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP 152
Query: 386 DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
D R +VSG D +K+W+ L K + H + + FHP+
Sbjct: 153 DGRWVVSGGLDNVVKVWD-LTAGKLLHEFKFHEGPIRSLDFHPL 195
Score = 53.6 bits (123), Expect = 1e-07
Identities = 26/85 (30%), Positives = 43/85 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + +SG D +++WDL AGK F+ H + S+ F + +GS D+T+K W+
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Query: 440 TLAECKYTIQDDGHSDWVSCVRFHP 514
L + + V ++FHP
Sbjct: 213 -LETFELIGSTRPEATGVRSIKFHP 236
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE- 451
L+G+ ++LWD+ K R F H + +V F + SGS D +K+W+ +
Sbjct: 74 LAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKG 133
Query: 452 CKYTIQDDGHSDWVSCVRFHP 514
C T + GHS +S +RF P
Sbjct: 134 CIQTYK--GHSRGISTIRFTP 152
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/80 (31%), Positives = 36/80 (45%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
++G D + LW + + HT V SVAF +++G+ IKLW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K GH S V FHP
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP 110
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D +K+W + + GHS ++T+ +PDG SGG D +WDL G
Sbjct: 121 DANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 174
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 520 ANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
A ++++ +K+W + K+ GH + V P G ASG D +WD
Sbjct: 69 AEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWD 128
Query: 700 L 702
+
Sbjct: 129 I 129
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+GS D+T++ WDL + V S+ F D R + G D ++K+++
Sbjct: 201 TGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCG-LDDSLKVYS 253
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G + SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD- 171
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
L K + H + + FHP
Sbjct: 172 LTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +2
Query: 176 DQRRKQLRYTSKAFIRSF-ALHF*CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
D R+K +T K R L F DG + +SG D +++WDL AGK F+ H
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRF----TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 353 TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+ S+ F + +GS D+T+K W+ L + + V C+ F+P
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRTVKFWD-LETFELIGSGGPETAGVRCLSFNP 237
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 454
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
+T + GH+ V+ +RF P
Sbjct: 136 IHTYK--GHTRGVNVLRFTP 153
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K GH V FHP
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D +K+W + + GH+ +N + +PDG SGG+D +WDL G
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAG 175
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 520 ANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
A+ ++V+ G T+K+W L K+ GH +V P G ASG D +W
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 697 DL 702
D+
Sbjct: 129 DI 130
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++V+ G D V +W + ++ GHS +++VT L A+G LWDL +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/84 (30%), Positives = 42/84 (50%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G + SGS D L++WD+ ++ HT+ V + F+ D R +VSG D +K+W+
Sbjct: 113 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD- 171
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
L K + H + + FHP
Sbjct: 172 LTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 55.2 bits (127), Expect = 4e-08
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Frame = +2
Query: 176 DQRRKQLRYTSKAFIRSF-ALHF*CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 352
D R+K +T K R L F DG + +SG D +++WDL AGK F+ H
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRF----TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 353 TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+ S+ F + +GS D+T+K W+ L + + V C+ F+P
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRTVKFWD-LETFELIGSGGPETAGVRCLSFNP 237
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-C 454
+G+ T++LWDL K R H + +SV F SGS D +K+W+ + C
Sbjct: 76 AGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGC 135
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
+T + GH+ V+ +RF P
Sbjct: 136 IHTYK--GHTRGVNVLRFTP 153
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+VS G D VKVW LT KL H G + ++ P L A+G D WDL
Sbjct: 158 VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/80 (28%), Positives = 33/80 (41%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
++G D + LW + H+ + SV F + +G+ TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K GH V FHP
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D +K+W + + GH+ +N + +PDG SGG+D +WDL G
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAG 175
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +1
Query: 520 ANPIIVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
A+ ++V+ G T+K+W L K+ GH +V P G ASG D +W
Sbjct: 69 ASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIW 128
Query: 697 DL 702
D+
Sbjct: 129 DI 130
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++V+ G D V +W + ++ GHS +++VT L A+G LWDL +
Sbjct: 31 VLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEE 90
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/54 (24%), Positives = 31/54 (57%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+GS D+T++ WDL + T V ++F+ D + ++ G ++ ++K+++
Sbjct: 202 TGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQE-SLKIFS 254
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 56.0 bits (129), Expect = 2e-08
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAE 451
++ S DKT+++W ++ G + FE HT VL +F D Q VS D +KLWN +E
Sbjct: 557 MTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Query: 452 CKYTIQDDGHSDWV 493
C T D H D V
Sbjct: 617 CIATY--DQHEDKV 628
Score = 51.6 bits (118), Expect = 5e-07
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSGSRDKT 424
S+ N +SGS D T+R+WDL A T ++ E H V S+A S D + S RDK
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 425 IKLWNTL-AECKYTI 466
+ LW+ CK T+
Sbjct: 216 VNLWDLHDYSCKATV 230
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Frame = +2
Query: 248 CAASDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDK 421
C +S GN + +GS DKT+RLW+ + H D+L+VAF+ + VSGS D+
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDR 469
Query: 422 TIKLWN 439
T+K+W+
Sbjct: 470 TLKVWS 475
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++ S G R ++VW L K + GH G + + G L A+ G D K ++WD++
Sbjct: 74 LLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDG 133
Query: 709 G 711
G
Sbjct: 134 G 134
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVLSVAFSVDNRQIVSGSR 415
++ +SGS D+TL++W L KT H KD+ SVA + ++ + +GS
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519
Query: 416 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
D+T +W L + + + GH + V F +
Sbjct: 520 DRTASIWR-LPDLVHVVTLKGHKRRIFSVEFSTV 552
Score = 39.5 bits (88), Expect = 0.002
Identities = 18/61 (29%), Positives = 33/61 (54%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
A + + +GS D+T +W L + H + + SV FS ++ +++ S DKT+K+
Sbjct: 508 ARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKI 567
Query: 434 W 436
W
Sbjct: 568 W 568
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +1
Query: 511 PNHANPIIVSCGWDRTVKVWHLT--NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKD 678
P+ I++S D TV+VW L N + K + H + ++ +S DG S G+D
Sbjct: 154 PDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRD 213
Query: 679 MKAMLWDLND 708
LWDL+D
Sbjct: 214 KVVNLWDLHD 223
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRDKTIKLWNTLAECKYTIQ 469
+R++D+A + H + VLS+ V N IV+GS+DKT++LWN ++ +
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGV- 441
Query: 470 DDGHSDWVSCVRF 508
GH+ + V F
Sbjct: 442 GTGHNGDILAVAF 454
Score = 35.5 bits (78), Expect = 0.035
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
+DG +S D L+LW++ + ++ H V ++A I +G D I LW
Sbjct: 593 TDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Query: 437 N 439
+
Sbjct: 653 H 653
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
+++ D+TVK+W +++ GH+ + + DG+ S G D LW++N
Sbjct: 556 VMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVN 613
Score = 32.3 bits (70), Expect = 0.33
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
++C + + T+ +K G S L + +SPD L S G + +WDL
Sbjct: 34 IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDL 89
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
VSCG D +K+W++ + + H + + V + A+GG D LW
Sbjct: 599 VSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWD 699
N +IV+ D+TV++W+ T+ GH+G + V + S SG D +W
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 700 LN 705
L+
Sbjct: 476 LD 477
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +3
Query: 66 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
G GHNG + +A K +S S D+TL VW L
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/54 (24%), Positives = 22/54 (40%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
DRT +W L + + GH + +V S + D +W ++DG
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDG 573
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Frame = +2
Query: 245 CC--AASDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 400
CC ++ + ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 220
Query: 401 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+SGS D T +LW+T A + GH V+ V+F P
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+S D T ++W + GH G +NTV PDG +G D L+D+ G
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
R + HT V S+ ++ + +IVS S+D + +WN L K
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 51 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 439
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 78 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 137
Query: 440 TLAECKYTIQDD----GHSDWVSCVRFHP 514
+ A+ T+ GH +VSC ++ P
Sbjct: 138 STADKDGTVPVSRMLTGHRGYVSCCQYVP 166
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Frame = +2
Query: 245 CC--AASDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 400
CC ++ + ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 99 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 158
Query: 401 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+SGS D T +LW+T A + GH V+ V+F P
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 196
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+S D T ++W + GH G +NTV PDG +G D L+D+ G
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 218
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 51 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 439
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 16 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 75
Query: 440 TLAECKYTIQDD----GHSDWVSCVRFHP 514
+ A+ T+ GH +VSC ++ P
Sbjct: 76 STADKDGTVPVSRMLTGHRGYVSCCQYVP 104
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLW 310
++DG+ +GSWD L++W
Sbjct: 288 SADGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 56.0 bits (129), Expect = 2e-08
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Frame = +2
Query: 245 CC--AASDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 400
CC ++ + ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 220
Query: 401 VSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+SGS D T +LW+T A + GH V+ V+F P
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+S D T ++W + GH G +NTV PDG +G D L+D+ G
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG 280
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
R + HT V S+ ++ + +IVS S+D + +WN L K
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +3
Query: 51 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--N 439
N +S S D L +W+ + T + V++ AFS + + + G D ++ +
Sbjct: 78 NRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPNGQSVACGGLDSVCSIFSLS 137
Query: 440 TLAECKYTIQDD----GHSDWVSCVRFHP 514
+ A+ T+ GH +VSC ++ P
Sbjct: 138 STADKDGTVPVSRMLTGHRGYVSCCQYVP 166
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLW 310
++DG+ +GSWD L++W
Sbjct: 350 SADGSALCTGSWDSNLKIW 368
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAAS-DGNYALSGSWDKTLRLWDLA 319
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 482 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 538
Query: 320 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 499
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 539 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 598
Query: 500 VRFHP 514
+ FHP
Sbjct: 599 IDFHP 603
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G
Sbjct: 653 ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 706
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C + +G S S D ++LW L++G + SV F ++ + I
Sbjct: 682 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 740
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+LWNT+ T+ GH +S + P
Sbjct: 741 ELWNTMENKCMTVA--GHECVISALAQSP 767
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAAS-DGNYALSGSWDKTLRLWDLA 319
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 320 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 499
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 500 VRFHP 514
+ FHP
Sbjct: 601 IDFHP 605
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G
Sbjct: 655 ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C + +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAAS-DGNYALSGSWDKTLRLWDLA 319
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 320 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 499
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 500 VRFHP 514
+ FHP
Sbjct: 601 IDFHP 605
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G
Sbjct: 655 ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C + +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAAS-DGNYALSGSWDKTLRLWDLA 319
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 320 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 499
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 500 VRFHP 514
+ FHP
Sbjct: 601 IDFHP 605
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G
Sbjct: 655 ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C + +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 55.2 bits (127), Expect = 4e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAAS-DGNYALSGSWDKTLRLWDLA 319
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 320 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 499
+ E+H + V F ++ Q+ + S DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 500 VRFHP 514
+ FHP
Sbjct: 601 IDFHP 605
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ TV ++ + N ++N GHS +++V SP+G L AS +D LW L+ G
Sbjct: 655 ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSG 708
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/89 (24%), Positives = 37/89 (41%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C + +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
S S+D T++LWD GK F H + V S+AFS + I SGS DK+I +W+
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/84 (32%), Positives = 44/84 (52%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G+Y L+GS D+T +WD+ A + ++FE H+ L V + +N + S D I L
Sbjct: 377 GDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCK- 434
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
+ E + GH V+CV++ P
Sbjct: 435 IGETRPAKTFTGHQGEVNCVKWDP 458
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ S +D TVK+W K+ + GH + ++ SP+G ASG D +W + +G
Sbjct: 514 LASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Score = 37.1 bits (82), Expect = 0.012
Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ--IVSGSR 415
G+ S S D T ++W++ +HTK++ ++ +S N+Q + S S
Sbjct: 460 GSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASF 519
Query: 416 DKTIKLWNTLAEC-KYTIQDDGHSDWVSCVRFHP 514
D T+KLW+ AE K +GH + V + F P
Sbjct: 520 DSTVKLWD--AELGKMLCSFNGHREPVYSLAFSP 551
Score = 35.1 bits (77), Expect = 0.047
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 6/99 (6%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G +GS D R+W L G+ H + S+ ++ +++GS D+T +W+
Sbjct: 335 EGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWD 393
Query: 440 TLAECKYTIQDDGHS------DWVSCVRFHPIMPTPLLY 538
AE ++ Q + HS DW + V F ++Y
Sbjct: 394 VKAE-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMIY 431
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +1
Query: 556 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
T + H+ N ++I GH+ + SP SL ASG D A +W + +G
Sbjct: 247 TSQTSHIPNSDVRILE-GHTSEVCACAWSPSASLLASGSGDATARIWSIPEG 297
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
GH G +N V P GSL AS D A +W++
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNI 477
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/56 (23%), Positives = 29/56 (51%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
+G Y SGS DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 552 NGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
R E HT +V + A+S + SGS D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 188
+L TL H G + + N K D +L+ S D+T +VW + +E
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE 398
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG A S D R+WDL G++ F+ H K V SV FS + + SG D ++W+
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 440 -TLAECKYTIQDDGHSDWVSCVRFHP 514
+ + Y I H++ VS V++ P
Sbjct: 452 LRMRKSLYII--PAHANLVSQVKYEP 475
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/84 (32%), Positives = 38/84 (45%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G Y + S+DKT RLWD+ G E H++ V +AF D S D ++W+
Sbjct: 351 GKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD- 409
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
L + + GH V V F P
Sbjct: 410 LRTGRSILVFQGHIKPVFSVNFSP 433
Score = 45.2 bits (102), Expect = 4e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
C + DG + S +LW++ T +DH + V FS + + + S D+
Sbjct: 261 CSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADR 320
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
T KLW T T +GH D ++ V FHP
Sbjct: 321 TAKLWKTDGTLLQTF--EGHLDRLARVAFHP 349
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+ SCG D +VW L + + GH + +V SP+G ASGG+D + +WDL
Sbjct: 395 LAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDL 452
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/77 (31%), Positives = 38/77 (49%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
+ S D+T +LW G + FE H + VAF + + + S DKT +LW+ +
Sbjct: 315 TASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 458 YTIQDDGHSDWVSCVRF 508
+Q +GHS V + F
Sbjct: 374 LLLQ-EGHSRSVYGIAF 389
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 547 WDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+D+T ++W + T +L + GHS + + DG+L AS G D A +WDL G
Sbjct: 359 YDKTWRLWDINTGAELLLQE-GHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTG 413
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G + + S+D + +W + H V S+ + D+ I + S D+TIKLW
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536
Query: 440 T 442
+
Sbjct: 537 S 537
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
DRT K+W T+ L GH L V P G + D LWD+N G
Sbjct: 319 DRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTG 371
Score = 27.5 bits (58), Expect = 9.3
Identities = 27/115 (23%), Positives = 43/115 (37%), Gaps = 12/115 (10%)
Frame = +1
Query: 388 QPSDSVWFSRQDYQTLEHPCGVQVYHPR*WTQRLGVMCQIPPNHANPI------------ 531
+P SV FS Y G + R W R+ I P HAN +
Sbjct: 424 KPVFSVNFSPNGYHLAS---GGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYF 480
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
+ + +D V +W + L + GH + ++ ++ D S A+ D LW
Sbjct: 481 LATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLW 535
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN- 439
NY S +D ++LWD+ G+ F +H K SV FS ++ SGS D ++KLWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 440 TLAECKYTIQDDGHSDWVSCVRFHP 514
C TI++ + V CV+F P
Sbjct: 827 NERNCLGTIRNIAN---VCCVQFSP 848
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAM 690
N+ + S +D VK+W +T + + + H +V S + ASG D
Sbjct: 763 NYIRNYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVK 822
Query: 691 LWDLND 708
LW++N+
Sbjct: 823 LWNINE 828
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
H K V S A +DN +V+ S D T+KLW+
Sbjct: 881 HNKAV-SYAKFLDNETLVTASTDNTLKLWD 909
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 433
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 434 WN-TLAECKYTIQDDGHSDWVSCVRFHPIMP 523
W+ C T+ DGH+ VS V FHP +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 449 ECKYTIQDDGHSDWVSCVRFHPIMP 523
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 78 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 197
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 709 G 711
G
Sbjct: 131 G 131
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKLK 594
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 433
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 434 WN-TLAECKYTIQDDGHSDWVSCVRFHPIMP 523
W+ C T+ DGH+ VS V FHP +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 449 ECKYTIQDDGHSDWVSCVRFHPIMP 523
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 78 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 197
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 709 G 711
G
Sbjct: 131 G 131
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKLK 594
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 53.2 bits (122), Expect = 2e-07
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 433
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 434 WN-TLAECKYTIQDDGHSDWVSCVRFHPIMP 523
W+ C T+ DGH+ VS V FHP +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y ++GS D T ++WD + + HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/85 (27%), Positives = 42/85 (49%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ L+ + T+ +W+ T+ FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 449 ECKYTIQDDGHSDWVSCVRFHPIMP 523
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 78 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 197
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD +
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 709 G 711
G
Sbjct: 131 G 131
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKLK 594
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 52.8 bits (121), Expect = 2e-07
Identities = 21/65 (32%), Positives = 40/65 (61%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
A ++G Y + G + LW++A GK +++ H + V + FS D+ +VSGS+D +I+
Sbjct: 86 ANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIR 145
Query: 431 LWNTL 445
+W+ +
Sbjct: 146 VWSLI 150
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
N +I+S DRT KVW L+ KL + ++ +N + + P G + +G +D K + +
Sbjct: 187 NAVIISSSEDRTCKVWSLSRGKL-LKNIIFPSVINALALDPGGCVFYAGARDSKIYIGAI 245
Query: 703 N 705
N
Sbjct: 246 N 246
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 13/75 (17%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAA---------GKTT--RRFEDHTKDVLSVAFSVD--NR 394
+ D + +SGS D ++R+W L G T F +HT V + N
Sbjct: 129 SGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNA 188
Query: 395 QIVSGSRDKTIKLWN 439
I+S S D+T K+W+
Sbjct: 189 VIISSSEDRTCKVWS 203
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/63 (26%), Positives = 26/63 (41%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N+ +V G + +W + KL GH + + S D SL SG +D +
Sbjct: 87 NNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRV 146
Query: 694 WDL 702
W L
Sbjct: 147 WSL 149
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SDG Y +G D+ + +WD+ + + F H V + F ++ SGS D+T+K+
Sbjct: 231 SSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKV 290
Query: 434 WNTLAECKYTIQDDGH 481
WN + + + ++ GH
Sbjct: 291 WN-VEDKAFITENHGH 305
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 364
CC SD Y LSGS + T+ LW + K F++ +D+
Sbjct: 352 CCFISDNEY-LSGSDNGTVALWGMLKKKPVFVFKNAHQDI 390
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
H + V+SVA S D+ + S S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
SGS+D+T+++W++ H ++L++ R + G RD+T+ L++ + E
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEILAIDALRKERALTVG-RDRTM-LYHKVPEST 338
Query: 458 YTIQDDGHSDWVSC 499
I S SC
Sbjct: 339 RMIYRAPASSLESC 352
Score = 27.5 bits (58), Expect = 9.3
Identities = 25/108 (23%), Positives = 45/108 (41%)
Frame = +2
Query: 272 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 451
AL+ D+T+ L+ T + + S F DN + +SGS + T+ LW L +
Sbjct: 320 ALTVGRDRTM-LYHKVPESTRMIYRAPASSLESCCFISDN-EYLSGSDNGTVALWGMLKK 377
Query: 452 CKYTIQDDGHSDWVSCVRFHPIMPTPLLYPVVGTELSRSGISLTVSSR 595
+ + H D + + I+ PV + S ++ +SR
Sbjct: 378 KPVFVFKNAHQDIPDGITTNGILENGDHEPVNNNCSANSWVNAVATSR 425
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 433
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 434 WN-TLAECKYTIQDDGHSDWVSCVRFHPIMP 523
W+ C T+ +GH+ VS V FHP +P
Sbjct: 214 WDYQTKSCVQTL--EGHTHNVSAVSFHPELP 242
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/60 (33%), Positives = 35/60 (58%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y ++GS D T ++WD + E HT +V +V+F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ L+ + TL +W+ + F+ V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNT 88
Query: 449 ECKYTIQDDGHSDWVSCVRFHPIMP 523
K + + H+D++ CV HP +P
Sbjct: 89 MDKIKVFE-AHADYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 78 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 197
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/57 (22%), Positives = 25/57 (43%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
P +++ D T KVW GH+ ++ V+ P+ + +G +D +W
Sbjct: 200 PYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIW 256
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKLK 594
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG+ LS S+D+T R+ L +GK + F HT V F+ D +I++ S D T+K+W+
Sbjct: 316 DGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Query: 440 T-LAECKYTIQ 469
+ +C T +
Sbjct: 376 SKTTDCLQTFK 386
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/79 (32%), Positives = 45/79 (56%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D SGS D +++W + G RRF+ H++ V S++FS D Q++S S D+T ++ +
Sbjct: 274 DSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI-H 332
Query: 440 TLAECKYTIQDDGHSDWVS 496
L K + GH+ +V+
Sbjct: 333 GLKSGKLLKEFRGHTSYVN 351
Score = 43.2 bits (97), Expect = 2e-04
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Frame = +2
Query: 236 HF*CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVD 388
H C S DG + S S D + +WD +GK + F H VL + FS D
Sbjct: 215 HAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRD 274
Query: 389 NRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRF 508
+ + SGS+D IK+W + + D HS V+ + F
Sbjct: 275 SEMLASGSQDGKIKIWR-IRTGVCIRRFDAHSQGVTSLSF 313
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
++S +D+T ++ L + KL GH+ Y+N + DGS + D +WD
Sbjct: 320 LLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWD 375
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/63 (25%), Positives = 28/63 (44%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C ++ G++ DK L ++ +G H KDV+ + + + S D T+
Sbjct: 447 CVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTM 506
Query: 428 KLW 436
KLW
Sbjct: 507 KLW 509
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 51.6 bits (118), Expect = 5e-07
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSGSRDKTIKL 433
D N S S D+T+++W+L + + H K V V + D +++GS D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 434 WN-TLAECKYTIQDDGHSDWVSCVRFHPIMP 523
W+ C T+ +GH+ VS V FHP +P
Sbjct: 214 WDYQTKSCVQTL--EGHTHNVSAVCFHPELP 242
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y ++GS D T ++WD + E HT +V +V F + I++GS D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/85 (27%), Positives = 41/85 (48%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ L+ + TL +W+ + FE V S F + +V+G+ D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNT 88
Query: 449 ECKYTIQDDGHSDWVSCVRFHPIMP 523
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 78 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 197
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
+V+ D ++V++ T K+K+ HS Y+ V V P S DM LWD
Sbjct: 72 VVAGADDMYIRVYNYNTMDKVKVFE-AHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 709 G 711
G
Sbjct: 131 G 131
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKLK 594
PII++ D TV++WH T +L+
Sbjct: 242 PIIITGSEDGTVRIWHATTYRLE 264
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/59 (37%), Positives = 41/59 (69%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
F+ H DVL +A+S ++ ++S S DKT++LWN ++ ++ HSD+V+C++F+P+
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNPV 564
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 427
A S + LS S DKT+RLW+L++ +T + H+ V + F+ VD+R +SGS D +
Sbjct: 520 AWSKSQHLLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKV 578
Query: 428 KLWN 439
++W+
Sbjct: 579 RVWS 582
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 708
++S D+TV++W+L++ + + HS Y+ + +P D SG D K +W + D
Sbjct: 527 LLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKVRVWSIPD 585
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/60 (23%), Positives = 32/60 (53%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y +SGS D +R+W + + ++ H + V S ++ D + ++ GS + ++++
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYS 623
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++ SC D T +W N + + GH+G + VS D S +G D A L
Sbjct: 19 NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKL 78
Query: 694 WDLNDG 711
WD+ G
Sbjct: 79 WDVKSG 84
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G+ S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 245 CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 403
CC S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 694 WDL 702
WD+
Sbjct: 220 WDM 222
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDL 316
C A+D ++ L+GS DKT +LWD+
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++ SC D T +W N + + GH+G + VS D S +G D A L
Sbjct: 19 NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKL 78
Query: 694 WDLNDG 711
WD+ G
Sbjct: 79 WDVKSG 84
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G+ S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 245 CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 403
CC S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 694 WDL 702
WD+
Sbjct: 220 WDM 222
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 418
C A+D ++ L+GS DKT +LWD+ +T + +T V A S+ N ++ G +D
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKD 678
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++GS DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++ SC D T +W N + + GH+G + VS D S +G D A L
Sbjct: 19 NREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKL 78
Query: 694 WDLNDG 711
WD+ G
Sbjct: 79 WDVKSG 84
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G+ S + D T LW G+ + H V S D+ ++++GS D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 35.1 bits (77), Expect = 0.047
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 245 CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 403
CC S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 35.1 bits (77), Expect = 0.047
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N IVS G D+ +++W KL +GH + ++ + D S +G D A L
Sbjct: 160 NQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKL 219
Query: 694 WDL 702
WD+
Sbjct: 220 WDM 222
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSGSRD 418
C A+D ++ L+GS DKT +LWD+ +T + +T V A S+ N ++ G +D
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM---RTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQD 256
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKD 678
GH G +N + +PDG +SGG+D
Sbjct: 288 GHFGPINALAFNPDGKSFSSGGED 311
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 50.4 bits (115), Expect = 1e-06
Identities = 23/56 (41%), Positives = 38/56 (67%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
HT DVL +A+S D+ ++S S+DKT++LW T C + H+++V+CV F+P+
Sbjct: 271 HTGDVLDLAWS-DSNLLLSASKDKTVRLWRT--GCDQCLHVFHHNNYVTCVEFNPV 323
Score = 41.5 bits (93), Expect = 5e-04
Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 427
A SD N LS S DKT+RLW + F H V V F+ V+ SGS D
Sbjct: 279 AWSDSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASGSIDGKA 337
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
++W L+E + D D +S + + P
Sbjct: 338 RIWG-LSEERVVAWTDVR-DSISAISYQP 364
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLN 705
+++S D+TV++W T C ++ H+ Y+ V +P + + ASG D KA +W L+
Sbjct: 285 LLLSASKDKTVRLWR-TGCDQCLHVFHHNNYVTCVEFNPVNKNNFASGSIDGKARIWGLS 343
Query: 706 D 708
+
Sbjct: 344 E 344
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 592 KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
KIN GH G + T+ SPDG A+GG+D +W
Sbjct: 193 KIN--GHKGKIWTLKFSPDGKYLATGGEDGVVKIW 225
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 188
L GH G V +A + +++LS+S+DKT+ +W+ D+
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQ 304
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/84 (29%), Positives = 46/84 (54%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN + S D+ + W+
Sbjct: 29 DGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWD 88
Query: 440 TLAECKYTIQDDGHSDWVSCVRFH 511
++ + + GH V+ V+F+
Sbjct: 89 -VSTGRVIRKFRGHDGEVNAVKFN 111
Score = 44.8 bits (101), Expect = 6e-05
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSGSRDKTI 427
++DGN L+G D TLRL D G+ + ++ H + N ++ GS D +
Sbjct: 193 SNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLV 252
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHPIMPTPLLYPVVGT 553
W+ L + K + H V+ V +HP L V GT
Sbjct: 253 FFWD-LVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGT 293
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 424
CC + + + GS D + WDL K +F H V SV++ +++ S D T
Sbjct: 234 CCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGT 293
Query: 425 IKLW 436
I++W
Sbjct: 294 IRVW 297
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/61 (27%), Positives = 34/61 (55%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
SD S D+ + WD++ G+ R+F H +V +V F+ + +VS D+++++W
Sbjct: 70 SDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVW 129
Query: 437 N 439
+
Sbjct: 130 D 130
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
N SCG DR V W ++ ++ GH G +N V + S+ S G D +WD
Sbjct: 72 NAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWD 130
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +1
Query: 535 VSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
++CG DRT+++W+ L + H + V V+ D + S G D + WD++ G
Sbjct: 34 LTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTG 92
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 173
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
+GS D+T+++WD+A G H + V +A S + + S DK +K W+ L + K
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 251
Query: 458 YTIQDDGHSDWVSCVRFHPIM 520
GH V C+ HP +
Sbjct: 252 VIRSYHGHLSGVYCLALHPTL 272
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/80 (31%), Positives = 33/80 (41%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
L+G D R+WD+ H V SV + Q+V+GS D TIK W+ L
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD-LRYG 334
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K H V + HP
Sbjct: 335 KTMSTLTHHKKSVRAMTLHP 354
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/52 (34%), Positives = 24/52 (46%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
++GS D T++ WDL GKT H K V ++ S S D T K
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
DRT+K+W + LK+ GH + + VS + S G D + WDL
Sbjct: 197 DRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDL 247
Score = 35.1 bits (77), Expect = 0.047
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 538 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
S G D+ VK W L K+ ++ GH + + + P + +GG+D +WD+
Sbjct: 235 SAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 317 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 204
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
++GH GWV +A +P + + S D+T+ +W
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 203
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
++++ G D +VW + K++I L GH + +V P +G D WDL
Sbjct: 274 VLLTGGRDSVCRVWDIRT-KMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
Query: 706 DG 711
G
Sbjct: 333 YG 334
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/61 (24%), Positives = 25/61 (40%)
Frame = +1
Query: 496 MCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 675
+C + +P +V+ D T+K W L K H + +T+ P + AS
Sbjct: 305 VCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASA 364
Query: 676 D 678
D
Sbjct: 365 D 365
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
GH G++ +V P +G D +WD+ G
Sbjct: 174 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 208
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 445
+ S +D R+WDL + F+ H K VLSV FS + + SG D ++W+ +
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
Query: 446 AECKYTIQDDGHSDWVSCVRFHP 514
+ Y I H + VS V++ P
Sbjct: 204 RKLLYII--PAHVNLVSQVKYEP 224
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 538 SCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
S G+D +VW L + + GH + +V SP+G ASGG+D + +WDL
Sbjct: 147 SSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDL 201
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-VDNRQIVSGS 412
C + DG ++ S +LW++ + T + + H + V V FS VD+ + + S
Sbjct: 69 CSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSVDDECLATAS 126
Query: 413 RDKTIKLWNT 442
D+T K+W T
Sbjct: 127 TDRTEKIWKT 136
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 451
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 452 --CKYTIQDDGHSDWVSCVRFHP 514
C YT+ D HS V V HP
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
D + L+ S DKT+R+W + A G T DH+ +V +V N+ VS S D
Sbjct: 275 DSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDG 331
Query: 422 TIKLWN-TLAECKYTIQDDGHSDWVSCVRFHP 514
T ++ + C + DD + + FHP
Sbjct: 332 TWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 HANPIIVSCGWDRTV-KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
H + +I+ G ++V K+W + + GH+G + ++ S +G A+ +D L
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRL 420
Query: 694 WDL 702
WDL
Sbjct: 421 WDL 423
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 463 HPR*WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 642
HP T + G+ C + H+ +I + G D T ++ + ++ GHS + +V
Sbjct: 215 HPLHKTNKPGI-CSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV 273
Query: 643 PDGSLCASGGKDMKAMLW 696
D L + D +W
Sbjct: 274 GDSDLVLTASADKTVRIW 291
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 191
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTN-----CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
++++ D+TV++W C +N HS + VTV P S D
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGTWCF 335
Query: 694 WDLNDG 711
+DL+ G
Sbjct: 336 YDLSSG 341
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 49.2 bits (112), Expect = 3e-06
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE-- 451
+G D T L+D +G+ H+K V SV F D+ +++ S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 452 --CKYTIQDDGHSDWVSCVRFHP 514
C YT+ D HS V V HP
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
D + L+ S DKT+R+W + A G T DH+ +V +V N+ VS S D
Sbjct: 275 DSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDG 331
Query: 422 TIKLWN-TLAECKYTIQDDGHSDWVSCVRFHP 514
T ++ + C + DD + + FHP
Sbjct: 332 TWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++ + + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 31.5 bits (68), Expect = 0.57
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 HANPIIVSCGWDRTV-KVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
H + +I+ G ++V K+W + + GH+G + ++ S +G A+ +D L
Sbjct: 362 HPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED-GVRL 420
Query: 694 WDL 702
WDL
Sbjct: 421 WDL 423
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/78 (23%), Positives = 33/78 (42%)
Frame = +1
Query: 463 HPR*WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 642
HP T + G+ C + H+ +I + G D T ++ + ++ GHS + +V
Sbjct: 215 HPLHKTNKPGI-CSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFV 273
Query: 643 PDGSLCASGGKDMKAMLW 696
D L + D +W
Sbjct: 274 GDSDLVLTASADKTVRIW 291
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 191
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTN-----CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
++++ D+TV++W C +N HS + VTV P S D
Sbjct: 278 LVLTASADKTVRIWRNPGDGNYACGYTLND--HSAEVRAVTVHPTNKYFVSASLDGTWCF 335
Query: 694 WDLNDG 711
+DL+ G
Sbjct: 336 YDLSSG 341
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 475
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 476 GHSDWVSCVRFH 511
GH D++ V+FH
Sbjct: 91 GHLDYIRTVQFH 102
Score = 48.4 bits (110), Expect = 5e-06
Identities = 24/80 (30%), Positives = 41/80 (51%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+SG D +++W+ + H + +V F +N IVS S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRT 126
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
++ GH+ +V C FHP
Sbjct: 127 CISVL-TGHNHYVMCASFHP 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
+H NP IVS D+T+++W+ + GH+ Y+ + P L S D +
Sbjct: 102 HHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
Query: 694 WDL 702
WD+
Sbjct: 162 WDI 164
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
+++ P+ VS G D +KVW+ + LGH Y+ TV + S D +
Sbjct: 60 HNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRI 119
Query: 694 WD 699
W+
Sbjct: 120 WN 121
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+ +S S D+T+R+W+ + H V+ +F +VS S D+T+++W+
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 34.7 bits (76), Expect = 0.062
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 251
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 252 LLVTVITHFPVLGTRLCVCGISLQARLP 335
V I + + G V S LP
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLP 217
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
P+IVS DR VK+W + K +++ L GH +++V + S +D +WD
Sbjct: 217 PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 39 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.5 bits (68), Expect = 0.57
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 344 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFH 511
E H + V +F IVSG+ D+ +KLW + E K D GH + VS V FH
Sbjct: 201 EGHDRGVNWASFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMFH 257
Score = 28.7 bits (61), Expect = 4.0
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 236 HF*CCAA--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSG 409
H+ CA+ + +S S D+T+R+WD+ A K ++ D++ FS N + G
Sbjct: 136 HYVMCASFHPKEDLVVSASLDQTVRVWDIGALK--KKSASPADDLMR--FSQMNSDLFGG 191
Query: 410 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPIMP 523
A KY ++ GH V+ FHP +P
Sbjct: 192 VD----------AIVKYVLE--GHDRGVNWASFHPTLP 217
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S + LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +SGS D +++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 434 WN 439
W+
Sbjct: 536 WS 537
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
F H DVL +++S ++ ++S S DKT++LW+ + K ++ HSD+V+C++F+P+
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSS--KTCLKVFSHSDYVTCIQFNPV 519
Score = 37.9 bits (84), Expect = 0.007
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 708
++S D+TV++W L++ K + HS Y+ + +P D + SG D K +W + D
Sbjct: 482 LLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRIWSIPD 540
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/61 (29%), Positives = 31/61 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D NY +SGS D +R+W + + + D + V + ++ D + + GS T L+N
Sbjct: 520 DDNYFISGSLDAKVRIWSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYN 578
Query: 440 T 442
T
Sbjct: 579 T 579
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +2
Query: 236 HF*CCAASDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 412
H C S N Y + S DKT+++W++ K + H + V FSVD +V+ S
Sbjct: 213 HILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTAS 272
Query: 413 RDKTIKLWNTLAECKYTIQDDGHSDWVSC 499
D T +LW+ A + + H V C
Sbjct: 273 SDMTARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = +1
Query: 499 CQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 678
C + P AN + + D+TVK+W++ KL+ GH ++ S DG + D
Sbjct: 217 CLLSP--ANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSD 274
Query: 679 MKAMLWDLNDG 711
M A LW + G
Sbjct: 275 MTARLWSMPAG 285
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
D +Y L+ + + +RL+D+ + + ++ HT +V++V F D + + SGS D T+K+
Sbjct: 46 DKHY-LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKI 104
Query: 434 WNTLA 448
W+ A
Sbjct: 105 WDLRA 109
Score = 38.7 bits (86), Expect = 0.004
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSGSRD 418
DG ++ + T +W L GK T + + H +L S N+ + + S D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 419 KTIKLWNTLAECKYTIQDDGHSDWV-SCV 502
KT+K+WN + K GH WV CV
Sbjct: 233 KTVKIWN-VDGFKLEKVLTGHQRWVWDCV 260
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/63 (28%), Positives = 34/63 (53%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D + SGS D T+++WDL A + +E V +V + +++SG ++ I++W+
Sbjct: 89 DAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELISGDQNGNIRVWD 147
Query: 440 TLA 448
A
Sbjct: 148 LRA 150
Score = 36.7 bits (81), Expect = 0.015
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 376
C + DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 259 CVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 550 DRTVKVWHLT--NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
D TVK+W L C+ + + +NTV + P+ + SG ++ +WDL
Sbjct: 99 DGTVKIWDLRAPGCQKEYESVAA---VNTVVLHPNQTELISGDQNGNIRVWDL 148
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 48.8 bits (111), Expect = 4e-06
Identities = 24/92 (26%), Positives = 48/92 (52%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
++DG Y + D LR++D + K + + +L A+S+D + +++G D +++
Sbjct: 312 SNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQV 371
Query: 434 WNTLAECKYTIQDDGHSDWVSCVRFHPIMPTP 529
W+ + + K +GH+ WVS V F +P
Sbjct: 372 WS-MEDRKVVAWGEGHNSWVSGVAFDSYWSSP 402
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 245 CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 379
CCA S DG Y L+G D +++W + K E H V VAF
Sbjct: 350 CCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +1
Query: 475 WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 654
W G + I ++ + + G D ++++ + KL + G L S DG
Sbjct: 299 WHIGQGAINSIAFSNDGAYLATVGRDGYLRIFDFSTQKLVCGVKSYYGALLCCAWSMDGK 358
Query: 655 LCASGGKDMKAMLWDLND 708
+GG+D +W + D
Sbjct: 359 YLLTGGEDDLVQVWSMED 376
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 48.8 bits (111), Expect = 4e-06
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDD 475
++LWD G RF++H V V F VSG D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 476 GHSDWVSCVRFHPIMP 523
GH D++ V+FH P
Sbjct: 91 GHLDYIRTVQFHHEYP 106
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/80 (28%), Positives = 40/80 (50%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+SG D +++W+ + H + +V F + IVS S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
++ GH+ +V C FHP
Sbjct: 127 CVSVL-TGHNHYVMCASFHP 145
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
+++ P+ VS G D +KVW+ N + LGH Y+ TV + S D +
Sbjct: 60 HNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRI 119
Query: 694 WD 699
W+
Sbjct: 120 WN 121
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
+H P IVS D+T+++W+ + GH+ Y+ + P L S D +
Sbjct: 102 HHEYPWIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRV 161
Query: 694 WDL 702
WD+
Sbjct: 162 WDI 164
Score = 37.1 bits (82), Expect = 0.012
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ +S S D+T+R+W+ + H V+ +F +VS S D+T+++W+ A
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Query: 449 ECKYTI 466
K T+
Sbjct: 167 LRKKTV 172
Score = 37.1 bits (82), Expect = 0.012
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TL 445
+SG+ D+ ++LW + K H +V SV F IVS S DK+I++W+ T
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATK 279
Query: 446 AECKYTIQDDGHSDWVSCVRFHPIM 520
T + + W+ V HP M
Sbjct: 280 RTGLQTFRREHDRFWILAV--HPEM 302
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +1
Query: 526 PIIVSCGWDRTVKVWHLTNCKL-KINHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
P+IVS DR VK+W + K +++ L GH +++V + S +D +WD
Sbjct: 217 PLIVSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +3
Query: 39 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 32.7 bits (71), Expect = 0.25
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 344 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRFH 511
E H + V AF IVSG+ D+ +KLW + E K D GH + VS V FH
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMFH 257
Score = 31.1 bits (67), Expect = 0.76
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/83 (26%), Positives = 41/83 (49%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 445
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+ S DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 446 AECKYTIQDDGHSDWVSCVRFHP 514
+ H + + HP
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHP 465
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
G+ LS D +++WD+ +GK R + H K V + FS D + ++ DK IK W+
Sbjct: 295 GHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWD 354
Query: 440 T 442
T
Sbjct: 355 T 355
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNC-KLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
+++S G D VK+W + N K ++GH+ + + S DGS + G D WD
Sbjct: 297 LLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTE 356
Query: 706 DG 711
G
Sbjct: 357 TG 358
Score = 35.9 bits (79), Expect = 0.027
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSGSRDK 421
C ++DG+ L+ +DK ++ WD G+ F + D++Q +++G DK
Sbjct: 333 CFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 392
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRF 508
I W+ + + T + D H V+ + F
Sbjct: 393 KIVQWD-INTGEVTQEYDQHLGAVNTITF 420
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 236
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 237 ISDV 248
+ D+
Sbjct: 329 VRDI 332
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +1
Query: 607 GH--SGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
GH +GY V SPDG SG + K WD
Sbjct: 498 GHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 530
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLW 436
+GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VSGS D +I W
Sbjct: 321 NGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHW 380
Query: 437 NTLAECKYTIQDDGHSDWVSCVRFHPI 517
E + H + V + +HPI
Sbjct: 381 IVGHENPQIEIPNAHDNSVWDLAWHPI 407
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+SG D+ ++LWD +G+ H VLSV ++ + +++ S+D+ IKL++ +
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD-IRTM 342
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K GH+ V+ + +HP
Sbjct: 343 KELQSFRGHTKDVTSLAWHP 362
Score = 34.7 bits (76), Expect = 0.062
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 19/77 (24%)
Frame = +1
Query: 538 SCGWDRTVKVWHLTNCK-------------LKIN------HLGHSGYLNTVTVSPDGSLC 660
SC D TVKVW T C ++I + GH + +V P SL
Sbjct: 224 SCSDDTTVKVWDFTKCVDESSLTGYIGKGVIEIRFGVMPCNAGHGWDVKSVDWHPTKSLL 283
Query: 661 ASGGKDMKAMLWDLNDG 711
SGGKD LWD G
Sbjct: 284 VSGGKDQLVKLWDTRSG 300
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
NY +SG TL+ W H + + ++F + + S S D T+K+W+
Sbjct: 178 NYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKVWD 235
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 51 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 206
T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIP 392
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
H DV SV + +VSG +D+ +KLW+T
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDT 297
Score = 29.1 bits (62), Expect = 3.1
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
++VS G D+ VK+W + + + GH + +V + +G+ + KD L+D+
Sbjct: 282 LLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYDI 339
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
G ++GS LW+ + + H + + S+ +S + +VSG T+K W
Sbjct: 135 GRRLITGSQSGEFTLWNGQSFNFEMILQAHDQPIRSMVWSHNENYMVSGDDGGTLKYW 192
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 48.4 bits (110), Expect = 5e-06
Identities = 26/85 (30%), Positives = 40/85 (47%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
+GS D+T+++WD+A G H V +A S + + S DK +K W+ L + K
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 245
Query: 458 YTIQDDGHSDWVSCVRFHPIMPTPL 532
GH V C+ HP + L
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVL 270
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/80 (32%), Positives = 35/80 (43%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
L+G D R+WD+ K H DV SV + Q+++GS D TIK W+ L
Sbjct: 270 LTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD-LRYG 327
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K H V + HP
Sbjct: 328 KSMATITNHKKTVRAMALHP 347
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
DRT+K+W + LK+ GH G + + VS + S G D + WDL
Sbjct: 191 DRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDL 241
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
++GS D T++ WDL GK+ +H K V ++A VS S D K
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/75 (24%), Positives = 37/75 (49%)
Frame = +1
Query: 478 TQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL 657
T +G + + ++ + + S G D+ VK W L K+ ++ GH + + + P +
Sbjct: 209 TGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDV 268
Query: 658 CASGGKDMKAMLWDL 702
+GG+D +WD+
Sbjct: 269 VLTGGRDSVCRVWDI 283
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 317 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
A K R + H V SVAF N +GS D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
L+GH GWV +A +P + + S D+T+ +W
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 197
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
GH G++ +V P +G D +WD+ G
Sbjct: 168 GHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATG 202
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 48.0 bits (109), Expect = 6e-06
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 236 HF*CCAASDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 412
H C S GN Y + S DKT+++W+L K + H + V FS+D +V+ S
Sbjct: 219 HILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTAS 278
Query: 413 RDKTIKLWNTLA 448
D T +LW+ A
Sbjct: 279 SDTTARLWSMRA 290
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/71 (29%), Positives = 32/71 (45%)
Frame = +1
Query: 499 CQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 678
C + P N + + D+TVK+W+L KL+ GH ++ S DG + D
Sbjct: 223 CLLSPG--NKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSD 280
Query: 679 MKAMLWDLNDG 711
A LW + G
Sbjct: 281 TTARLWSMRAG 291
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +2
Query: 299 LRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECK 457
+RL+DL + R F HTK+V++V F + SGS D ++K+W+ + EC+
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/63 (26%), Positives = 34/63 (53%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G+ SGS D ++++WDL + R F V +V + +++SG ++ I++W+
Sbjct: 96 GHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDL 154
Query: 443 LAE 451
A+
Sbjct: 155 RAD 157
Score = 35.9 bits (79), Expect = 0.027
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 7/85 (8%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLW-DLAAGKTTRRFED------HTKDVLSVAFSVDNRQIVSGSRD 418
DG ++ + T +W L +T FE H +L S N+ + + S D
Sbjct: 179 DGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD 238
Query: 419 KTIKLWNTLAECKYTIQDDGHSDWV 493
KT+K+WN L K GH WV
Sbjct: 239 KTVKIWN-LDGFKLEKVLTGHERWV 262
Score = 35.9 bits (79), Expect = 0.027
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 358
C + DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 265 CDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S+ Y LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++
Sbjct: 331 SEKGYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRI 389
Query: 434 WNTLAECKYTIQDDGHSDWVSCVRFHP 514
W+ + C+ D D V+ V + P
Sbjct: 390 WD-VTRCRVVDYTD-IRDIVTAVCYRP 414
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 505
K F+ H ++L +++S + ++S S D+T++LW C ++ H+++V+CV
Sbjct: 313 KPLHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVA 369
Query: 506 FHPI 517
F+P+
Sbjct: 370 FNPV 373
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 81 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
H G + + SPDG AS G+D +W + +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITE 249
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 48.0 bits (109), Expect = 6e-06
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S+ Y LS S D+T+RLW + + R F H V VAF+ VD+ +SGS D +++
Sbjct: 331 SEKGYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRI 389
Query: 434 WNTLAECKYTIQDDGHSDWVSCVRFHP 514
W+ + C+ D D V+ V + P
Sbjct: 390 WD-VTRCRVVDYTD-IRDIVTAVCYRP 414
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/64 (28%), Positives = 38/64 (59%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 505
K F+ H ++L +++S + ++S S D+T++LW C ++ H+++V+CV
Sbjct: 313 KPLHEFKGHIGEILDLSWS-EKGYLLSSSVDETVRLWRV--GCDECLRTFTHNNFVTCVA 369
Query: 506 FHPI 517
F+P+
Sbjct: 370 FNPV 373
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 81 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
H G + + SPDG AS G+D +W + +
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITE 249
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 47.6 bits (108), Expect = 8e-06
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C + DG SG D LRLWD+ GK H+ V SV+ S + +I++ RD
Sbjct: 364 CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVH 423
Query: 428 KLWNT-LAECKYTIQDDGH---SDWV-SCV 502
+++T E T++ G+ S+W SC+
Sbjct: 424 NVFDTRTLEICGTLRASGNRLASNWSRSCI 453
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/78 (29%), Positives = 41/78 (52%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ +S ++D+T++LWDL G T T + ++ S+D + SG D ++LW+ +
Sbjct: 330 HVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQ 387
Query: 449 ECKYTIQDDGHSDWVSCV 502
K + GHS V+ V
Sbjct: 388 TGKLLSEVAGHSSAVTSV 405
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 436
D ++ + L +WD+++G+ HT V +V S +R +VS + D+TIKLW
Sbjct: 284 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 437 N 439
+
Sbjct: 344 D 344
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/76 (21%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAEC 454
+G D+ +++WD +G + ++L +A + DN+ +++ + + +W+ +
Sbjct: 248 TGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 307
Query: 455 KYTIQDDGHSDWVSCV 502
++T+ GH+D V V
Sbjct: 308 RHTL--TGHTDKVCAV 321
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+VS +DRT+K+W L + N + + N + +S DG SG D LWD+ G
Sbjct: 331 VVSAAYDRTIKLWDL-HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTG 389
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 487 LGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSL-CA 663
LG + + H N +++ + VW +++ +++ GH+ + V VS S
Sbjct: 273 LGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVV 332
Query: 664 SGGKDMKAMLWDLNDG 711
S D LWDL+ G
Sbjct: 333 SAAYDRTIKLWDLHKG 348
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 678
D +++W + KL GHS + +V++S +G+ + G+D
Sbjct: 378 DGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRD 420
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKL 433
SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+SGS D T KL
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 434 WN 439
W+
Sbjct: 166 WD 167
Score = 47.2 bits (107), Expect = 1e-05
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDL----AAGKTTRRFEDH----TKDVLSVAFSVDNRQIVSGSR 415
DG+Y L+ D L +WD+ + + FE H K++L ++S D ++ +GS
Sbjct: 233 DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSS 292
Query: 416 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPIMP 523
D+ + +W+T + + + GH+ V+ FHP P
Sbjct: 293 DRMVHIWDTTSR-RTIYKLPGHTGSVNECVFHPTEP 327
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 245 CCAASDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
CC G +SGS D T +LWD+ + F D + + +V+FS +I +G D
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDN 202
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+K+W+ L + + T+ +GH D ++ + P
Sbjct: 203 DVKVWD-LRKGEATMTLEGHQDTITGMSLSP 232
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
I + G D VKVW L + + GH + +++SPDGS + G D K +WD+
Sbjct: 195 IFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
G SGS D+ + LW + K + H +L + ++ D QIVS S DKT++ W+
Sbjct: 65 GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 36.7 bits (81), Expect = 0.015
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G D +++WDL G+ T E H + ++ S D +++ D + +W+
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 424
C + DG +GS D+ + +WD + +T + HT V F I S S DK
Sbjct: 278 CSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKN 337
Query: 425 IKL 433
I L
Sbjct: 338 IYL 340
Score = 34.3 bits (75), Expect = 0.081
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDL 702
IVS D+TV+ W + K HS ++N+ + G L SG D A LWD+
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDM 168
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLT-NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAM 690
N A +I S DR + +W + +CK + GH + + + DGS S D
Sbjct: 62 NPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVR 121
Query: 691 LWDLNDG 711
WD+ G
Sbjct: 122 AWDVETG 128
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 487
H V ++ F+ I SGS D+ I LW +CK + GH +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +1
Query: 508 PPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKA 687
P P+I+S D T K+W + + I + V+ S +GG D
Sbjct: 146 PTRRGPPLIISGSDDGTAKLWDMRQ-RGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDV 204
Query: 688 MLWDLNDG 711
+WDL G
Sbjct: 205 KVWDLRKG 212
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
GH + T+ +P G+L ASG D + LW
Sbjct: 51 GHPSAVYTMKFNPAGTLIASGSHDREIFLW 80
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S NY LS S DKT+RLW + + F H V SV F+ V+ +SGS D +++
Sbjct: 337 SKDNYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRI 395
Query: 434 WNTLAECKYTIQDDGHSDWVSCVRFHP 514
WN ++ C D D +S V + P
Sbjct: 396 WN-ISGCSVVDWAD-LKDIISAVCYRP 420
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 75 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
RGH G V I+ + + +LS+S DKT+ +WK+
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKV 356
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 81 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
HN +VT + NP + +S S D + +W ++
Sbjct: 367 HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNIS 399
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKL 433
N SGS DK +++WD+A GK E H K V +VA++ ++ +SGSRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 38.7 bits (86), Expect = 0.004
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDK 421
GN+ G+ + ++ +WDL R T + + F+ +NR IV SGS DK
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQT--LFFLTFNWENRNIVASGSEDK 237
Query: 422 TIKLWN-TLAECKYTIQDDGHSDWVSCVRFHPIMPTPLL 535
+K+W+ +CK T++ H V V ++ P LL
Sbjct: 238 KVKVWDVATGKCKVTMEH--HEKKVHAVAWNNYTPEVLL 274
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
SGSWDKTL++W L+ K + H + +VA D+ + +GS D T+K+W + K
Sbjct: 266 SGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGK 324
Query: 458 YT 463
T
Sbjct: 325 GT 326
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
++ S WD+T+KVW L++ K + H +NTV D L +G D +W
Sbjct: 263 LLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFD-DLLFTGSADGTLKVW 317
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/53 (41%), Positives = 31/53 (58%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
SGSWDKTL++W L+ K E H V +V D+ + +GS D T+K+W
Sbjct: 262 SGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVW 313
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
++ S WD+T+KVW L++ K + H +NTV VS L +G D +W
Sbjct: 259 LLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTV-VSGFDDLVFTGSADGTLKVW 313
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 502
H V ++ + D + SGS DKT+K+W L++ K + H D V+ V
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTV 293
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +1
Query: 532 IVSCGW-DRTVKVWHLTNCKLKINHLG--HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+V CG D TV W + H G H + + ++ GSL SGG D +W
Sbjct: 348 VVYCGSSDGTVNFWERQKY---LTHKGTIHGHRMAVLCLATAGSLLLSGGADKNICVWKR 404
Query: 703 N-DG 711
N DG
Sbjct: 405 NGDG 408
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
++D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTV 107
Query: 428 KLWNTLAE--CKYTIQDDGHSDWVSCV 502
K W+ L++ C T++ HSD+V+C+
Sbjct: 108 KTWDGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G +SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 225 GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Query: 443 -LAECKYTIQDDGHSDW 490
C +T S W
Sbjct: 285 GQQRCLHTYAVHTDSVW 301
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++VS G ++ ++VW + GH+ + + + G C SG D L
Sbjct: 222 NDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL 281
Query: 694 WDL 702
WDL
Sbjct: 282 WDL 284
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 532 IVSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 702
+VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 359 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 496
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 323 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 487
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
++D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTV 107
Query: 428 KLWNTLAE--CKYTIQDDGHSDWVSCV 502
K W+ L++ C T++ HSD+V+C+
Sbjct: 108 KTWDGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G +SG +K LR+WD G + + HT +V + R +SGS D I+LW+
Sbjct: 225 GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Query: 443 -LAECKYTIQDDGHSDW 490
C +T S W
Sbjct: 285 GQQRCLHTYAVHTDSVW 301
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
S G + LSGS D +RLWDL + + HT V ++A + + SG RD+ + L
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++VS G ++ ++VW + GH+ + + + G C SG D L
Sbjct: 222 NDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRL 281
Query: 694 WDL 702
WDL
Sbjct: 282 WDL 284
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 532 IVSCGWDRTVKVWH-LTNCKLKINHLGHSGYLNTVTV-SPDGSLCASGGKDMKAMLWDL 702
+VSC D TVK W L++ HS Y+ + V + + ++ ASGG + +WD+
Sbjct: 98 LVSCSSDTTVKTWDGLSDGVCTRTLRQHSDYVTCLAVAAKNNNVVASGGLGGEVFIWDI 156
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 359 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 496
DVL + S D + +GSRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/55 (25%), Positives = 29/55 (52%)
Frame = +2
Query: 323 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 487
G T + H + V ++A + +VSG +K +++W+ K +++ GH+D
Sbjct: 203 GYTPTIAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSK-SMKLRGHTD 256
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 439
NY S +D +++WD G+ ++ +H K SV FS D + VSGS D ++KLW+
Sbjct: 779 NYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWS 837
Score = 35.9 bits (79), Expect = 0.027
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 CCA--ASDGNYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 412
CC +S N+ L+ GS D + +DL KT H K V V F +D+ IVS S
Sbjct: 854 CCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSAS 912
Query: 413 RDKTIKLWN 439
D ++KLWN
Sbjct: 913 TDNSLKLWN 921
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWNT 442
N+ S ++ + +WD+ ++ +E+H K SV FS + +VSGS D +K+W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 443 LAECKYTIQDDGHSDWVSCVRFHP 514
E I D ++ + CV+++P
Sbjct: 494 RQEAS-VINIDMKAN-ICCVKYNP 515
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
N S S D TLRLWD+ R F HT + V +V++ + GS + +++
Sbjct: 561 NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 CCAASDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
C + +D L S SWD+T+++W +A K H V SV S + SGS D
Sbjct: 211 CLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADG 269
Query: 422 TIKLWNTLAECKYT 463
T+K W + KYT
Sbjct: 270 TVKAWKRDQQGKYT 283
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/74 (27%), Positives = 33/74 (44%)
Frame = +1
Query: 475 WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS 654
W + + + N ++ S WDRT+KVW + + K + H +N+V VS +
Sbjct: 202 WIKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEA 260
Query: 655 LCASGGKDMKAMLW 696
+ SG D W
Sbjct: 261 IVFSGSADGTVKAW 274
Score = 31.5 bits (68), Expect = 0.57
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 11/97 (11%)
Frame = +2
Query: 179 QRRKQLRYTSKAFIRSFALHF*CCAASDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDH 352
+R KQL Y ++ L C + G+ SGS DKT+ +W T H
Sbjct: 323 EREKQLNYGG--ILKGHKLAVLCLEVA-GSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 353 TKDVLSVAFSVDNRQ---------IVSGSRDKTIKLW 436
T V +A D + SGS DK++K+W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 248 CAASD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
CA D G Y ++GS D+ +++W + H D+ +A S +N + S S D
Sbjct: 310 CAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDF 369
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
I++W ++ GH+ V+ + F P
Sbjct: 370 VIRVWRLPDGMPISVL-RGHTGAVTAIAFSP 399
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +1
Query: 484 RLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 663
R V C I +I DR VK+W + + GH G + + VS + +L A
Sbjct: 305 RNAVYCAIFDRSGRYVITGSD-DRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVA 363
Query: 664 SGGKDMKAMLWDLNDG 711
S D +W L DG
Sbjct: 364 SASNDFVIRVWRLPDG 379
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 170
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 323 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 502
G +RF + V + +S+DNR +++ D I +WN A+ GHS+ +
Sbjct: 587 GGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCRICVWNA-ADGSLVHCLTGHSESSYVL 645
Query: 503 RFHPIMP 523
HP P
Sbjct: 646 DVHPFNP 652
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 45.2 bits (102), Expect = 4e-05
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S LS S DKT+RLWD+ KT + H V + FS VD +SGS D I++
Sbjct: 515 SKSQLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRI 573
Query: 434 WN 439
W+
Sbjct: 574 WS 575
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/56 (32%), Positives = 37/56 (66%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
H +L +++S ++ ++S S DKT++LW+ E K ++ H+D+V+C++F P+
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPV 557
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D NY LSGS D +R+W + + + D + V + ++ D + + GS + ++
Sbjct: 558 DENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYD 616
Query: 440 TLAECK 457
T +CK
Sbjct: 617 T-EDCK 621
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 44.8 bits (101), Expect = 6e-05
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
DG S SWD+TL++W K F + D ++ +N I +GS D+ IK+W
Sbjct: 176 DGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKVW 234
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/78 (25%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 475 WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 651
W + + + + ++ S WDRT+K+W T+ K L+ H +N V +S +G
Sbjct: 161 WVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENG 220
Query: 652 SLCASGGKDMKAMLWDLN 705
+ +G D + +W N
Sbjct: 221 DI-YTGSSDQRIKVWRKN 237
Score = 34.7 bits (76), Expect = 0.062
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 4/88 (4%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
+ ++G+ SG D ++ +W+ G HT+ VL +A D + SGS DK
Sbjct: 268 SGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADK 325
Query: 422 TIKLWNTLA-ECKYTIQDDGHSDWVSCV 502
T++LW A + +GH V C+
Sbjct: 326 TVRLWKCSAKDYSCLAMLEGHLGPVKCL 353
Score = 31.5 bits (68), Expect = 0.57
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 11/65 (16%)
Frame = +1
Query: 550 DRTVKVWHLT----NCKLKINHL------GHSGYLNTVTVS-PDGSLCASGGKDMKAMLW 696
D+ +KVW N K K H H+ +N + +S +GSL SGG D ++W
Sbjct: 228 DQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGSILVW 287
Query: 697 DLNDG 711
+ +DG
Sbjct: 288 ERDDG 292
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ------ 397
C A + SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 310 CLAVVSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADEASY 368
Query: 398 -IVSGSRDKTIKLWNTL 445
I SG D +K+W L
Sbjct: 369 HIYSGGLDSQVKVWQVL 385
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCV 502
H V +A S D + S S D+T+K+W T +C + + H D ++ V
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAV 214
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 66 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 173
G LRGH V +A D++ S S DKT+ +WK
Sbjct: 299 GMLRGHTESVLCLAV---VSDILCSGSADKTVRLWK 331
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
F H DVL +++S ++ ++S S DKT++LW+ E + ++ H+D+V+CV+F+P+
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWDI--ETQSCLKLFAHNDYVTCVQFNPL 570
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLWN 439
LS S DKT+RLWD+ + F H V V F+ +D +SGS D I++WN
Sbjct: 534 LSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Score = 32.3 bits (70), Expect = 0.33
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D +Y +SGS D +R+W++ + + + D + V +V ++ D + GS + +L++
Sbjct: 571 DEDYFISGSLDAKIRIWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYS 629
Query: 440 TLAECK--YTIQDD------GHSDWVSCVRFHPIMPTPLL 535
+CK T Q D + ++ +F PI P+ +L
Sbjct: 630 A-EDCKLEQTNQIDLQNKKKAQAKKITAFQFSPINPSEVL 668
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
H G + T+ SPD L AS G+D +W++ +
Sbjct: 410 HQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQE 442
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIK 430
++DG ++GS D ++ ++DL A + + R HT DV +V F+ ++ I+SGS D K
Sbjct: 238 STDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCK 297
Query: 431 LWN 439
+W+
Sbjct: 298 VWD 300
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 412
C A GN LSGS D ++WD + K H + V + D R +S
Sbjct: 278 CFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNG 337
Query: 413 RDKTIKLWN 439
+D+TIKLW+
Sbjct: 338 KDQTIKLWD 346
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD-GSLCASGGKDMKAMLWD 699
+V+ D ++ V+ L ++ + + H+ +NTV + + G+L SG D +WD
Sbjct: 244 VVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCKVWD 300
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDL 316
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/83 (26%), Positives = 42/83 (50%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SDG ++GS DK L++W L G + H V+ V F + + S +D+ +K
Sbjct: 591 SSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKY 650
Query: 434 WNTLAECKYTIQDDGHSDWVSCV 502
W+ + ++ + +GH + C+
Sbjct: 651 WDA-DKFEHLLTLEGHHAEIWCL 672
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G+ SGS D + LWD+ R H V + F +++VS S+DK +++W+
Sbjct: 118 GSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Query: 443 LAECKYTIQDDGHSD 487
+ I HS+
Sbjct: 178 ETQHCMQIVSGHHSE 192
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
A+S + G D ++R+WD G F H V ++ ++ + SGS+D I
Sbjct: 72 ASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDII 131
Query: 431 LWNTLAECKYTIQDDGHSDWVSCVRF 508
LW+ + E + GH D V+ + F
Sbjct: 132 LWDVVGE-SGLFRLRGHRDQVTDLVF 156
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 532 IVSCGW-DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
+V+ G+ D ++++W ++N H G + + + GS+ ASG KD +LWD+
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDV 135
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
D TVKV+++ + K ++ GH + + +S DG L +G +D +W L+ G
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFG 614
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTI 466
D T++++ + + K H V+ + S D IV+GS+DK +K+W +C +I
Sbjct: 561 DSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSI 620
Query: 467 QDDGHSDWVSCVRF 508
H D V V+F
Sbjct: 621 --FAHGDSVMGVKF 632
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +3
Query: 81 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVLL 257
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V L
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFL 157
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 445
+Y S D+ ++ WD + E H ++ +A S +V+GS D++++ W+
Sbjct: 637 HYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Query: 446 AE 451
E
Sbjct: 697 EE 698
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/59 (25%), Positives = 24/59 (40%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
+ S G DR VK W + + GH + + +S G +G D WD ++
Sbjct: 639 LFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRSE 697
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +2
Query: 359 DVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 502
DVL+VA S D + I D T+K++ + K+ + GH V C+
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCI 588
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 44.8 bits (101), Expect = 6e-05
Identities = 22/66 (33%), Positives = 30/66 (45%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N ++ SC D T VW N + + GHSG + +S D S +G D A L
Sbjct: 46 NRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKL 105
Query: 694 WDLNDG 711
WD+ G
Sbjct: 106 WDVKSG 111
Score = 44.8 bits (101), Expect = 6e-05
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++GS DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 35.1 bits (77), Expect = 0.047
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+G+ S + D T +W G+ + H+ V S D+ ++++GS D+T KLW+
Sbjct: 48 NGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTNCKL---KINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N IVS G D +++W KL +GH + ++ + D S +G D A L
Sbjct: 187 NQTIVSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 246
Query: 694 WDL 702
WD+
Sbjct: 247 WDM 249
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRD 418
C A+D ++ L+GS DKT +LWD+ + + V +VA S + N ++ G +D
Sbjct: 227 CKAADDSHFLTGSHDKTAKLWDMRTLTLIKTYTT-VVPVNAVAMSPLLNHVVLGGGQD 283
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +2
Query: 245 CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 403
CC S D + ++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 84 CCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKD 678
GH G +N + SPDG +SGG+D
Sbjct: 315 GHFGPINALAFSPDGKSFSSGGED 338
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 248 CAASD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
CA D G Y ++GS D+ +++W + H D+ +A S +N I S S D
Sbjct: 250 CAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDC 309
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHPIMPTP 529
I++W ++ GH+ V+ + F P +P
Sbjct: 310 VIRVWRLPDGLPVSVL-RGHTGAVTAIAFSPRPGSP 344
Score = 37.9 bits (84), Expect = 0.007
Identities = 23/76 (30%), Positives = 30/76 (39%)
Frame = +1
Query: 484 RLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCA 663
R V C I +I DR VKVW + + GH G + + VS + A
Sbjct: 245 RNAVYCAILDRSGRYVITGSD-DRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIA 303
Query: 664 SGGKDMKAMLWDLNDG 711
S D +W L DG
Sbjct: 304 SASNDCVIRVWRLPDG 319
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 170
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 44.4 bits (100), Expect = 8e-05
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDH--TKDVLSVAFS-VDNRQIVSGSRDK 421
+ DG + + + + LWDLA K +F H +K V+ F +D+ I SGS D
Sbjct: 406 SGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIRSCFGGLDSSFIASGSEDS 465
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHPIMPTPL 532
+ +WN L K GHS V+CV ++P P L
Sbjct: 466 QVYIWN-LKNTKPLEVLSGHSMTVNCVSWNPKNPRML 501
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDK 421
C D ++ SGS D + +W+L K H+ V V+++ N R + S S D+
Sbjct: 449 CFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQ 508
Query: 422 TIKLW 436
TI++W
Sbjct: 509 TIRIW 513
Score = 34.3 bits (75), Expect = 0.081
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSGSRDKT 424
++ G Y + S D T +W + E H V V++S D+ ++++ +
Sbjct: 233 SNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEV 292
Query: 425 IKLWN 439
+KLW+
Sbjct: 293 LKLWD 297
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 449 E-CKYTIQDDG 478
E C+ ++ G
Sbjct: 152 EKCQGLLRVQG 162
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 478 TQRLGVMCQIPPNHANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 651
+++ GV +H +I S GWD ++++ L + K GH + ++++ G
Sbjct: 73 SKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGG 132
Query: 652 SLCASGGKDMKAMLWD 699
SG D +LWD
Sbjct: 133 ECFISGSLDRTVLLWD 148
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
Y+ WD +LRL L K R F+ H V+S++ +SGS D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 449 E-CKYTIQDDG 478
E C+ ++ G
Sbjct: 149 EKCQGLLRVQG 159
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +1
Query: 478 TQRLGVMCQIPPNHANPIIVSC--GWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG 651
+++ GV +H +I S GWD ++++ L + K GH + ++++ G
Sbjct: 70 SKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGG 129
Query: 652 SLCASGGKDMKAMLWD 699
SG D +LWD
Sbjct: 130 ECFISGSLDRTVLLWD 145
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S+ + LS S D+T+RLW + + R H V VAF+ VD+ +SGS D +++
Sbjct: 372 SEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRI 431
Query: 434 WN 439
W+
Sbjct: 432 WD 433
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
F HT ++L +++S + ++S S D+T++LW + I+ H +V+CV F+P+
Sbjct: 359 FRGHTGEILDLSWS-EKGFLLSSSVDETVRLWR-VGSSDECIRVFSHKSFVTCVAFNPV 415
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D NY +SGS D +R+WD++ + + D + V ++ + D + V GS + ++
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYH 474
Query: 440 T 442
T
Sbjct: 475 T 475
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
D SGS D + + D A GKT HT VLSV S D I +GS D+T++LW
Sbjct: 212 DPRVLFSGSDDGHVNMHD-AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLW 270
Query: 437 NTLAECKYTIQD-DGHSDWVSCVRFHP 514
+ + + IQ H+D V V F P
Sbjct: 271 D--LKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQIVSGS 412
A+ DG +GS D+T+RLWDL + +H V SVAF V ++ S S
Sbjct: 251 ASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVS 310
Query: 413 RDKTIKLWN 439
DK++ L++
Sbjct: 311 DDKSVSLYD 319
Score = 35.9 bits (79), Expect = 0.027
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
GH+ ++ +V SPDG A+G D LWDL
Sbjct: 241 GHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Score = 32.3 bits (70), Expect = 0.33
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 505 IPPNHANPIIVSCG-WDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDM 681
+P P ++ G D TVK+W L + GHS + + P G + AS D
Sbjct: 23 VPATEDRPALLLTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDS 82
Query: 682 KAMLWDLN 705
++D++
Sbjct: 83 FVRVFDVD 90
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 398 IVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+++GS D+T+KLW E + GHS V+ + HP
Sbjct: 33 LLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHP 70
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/92 (25%), Positives = 47/92 (51%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
++DG + + D LR++D K + + +L ++S+D + I++G D +++
Sbjct: 312 SNDGAHLATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQV 371
Query: 434 WNTLAECKYTIQDDGHSDWVSCVRFHPIMPTP 529
W+ + + K +GH+ WVS V F +P
Sbjct: 372 WS-MEDRKVVAWGEGHNSWVSGVAFDSNWSSP 402
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 245 CCAAS-DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 379
CC+ S DG Y L+G D +++W + K E H V VAF
Sbjct: 350 CCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/59 (23%), Positives = 26/59 (44%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
+ + G D ++++ KL + G L + S DG +GG+D +W + D
Sbjct: 318 LATVGRDGYLRIFDFLTQKLVCGGKSYYGALLCCSWSMDGKYILTGGEDDLVQVWSMED 376
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL 445
D +RL+D+ K R F HT + + FS D + ++S S D ++++W+ +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVI 587
Score = 31.5 bits (68), Expect = 0.57
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGK 328
C + DG + +S S D +LR+WD+ K
Sbjct: 564 CFSEDGKWVISSSMDGSLRIWDVILAK 590
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/69 (18%), Positives = 30/69 (43%)
Frame = +1
Query: 496 MCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGK 675
+ +I + N ++ + D ++++ + K+ GH+ + + S DG S
Sbjct: 518 LVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSM 577
Query: 676 DMKAMLWDL 702
D +WD+
Sbjct: 578 DGSLRIWDV 586
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/63 (36%), Positives = 34/63 (53%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C A G SGS DKT+++WDL + + HT V S+ ++ ++S S D TI
Sbjct: 263 CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTI 320
Query: 428 KLW 436
K+W
Sbjct: 321 KVW 323
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 344 EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 469
E H+ +V F+V + + SGS DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
S+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 245 SDPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
SDG G D +++L KT H V +A S DN +V+GSRD T+ LW
Sbjct: 2636 SDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
D ++K+ K GH + + +SPD + +G +D +LW ++
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLWRIH 2698
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
+G D T L+D +G+ H+K V S+ F D +++ S DKT+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 298
Query: 458 YTIQD--DGHSDWVSCVRFH 511
YT + HS V V H
Sbjct: 299 YTSRHTLKDHSAEVRAVTVH 318
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
D + L+ S DKT+R+W + G T R +DH+ +V +V N+ VS S D T
Sbjct: 275 DTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWC 334
Query: 431 LWN-TLAECKYTIQDDGHSDW-VSCVRFHP 514
++ + C + D +D + FHP
Sbjct: 335 FYDLSSGLCLAQVTDASENDVNYTAAAFHP 364
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 191
++ TL GH+ VT I D++L++S DKT+ +W + D N
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSEDGN 298
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
H + +I+ G ++ VK+W + + GH+G + +++ S +G A+ D L
Sbjct: 363 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALD-GVRL 421
Query: 694 WDL 702
WDL
Sbjct: 422 WDL 424
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 245 CCAASDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
C A S+ L SGSWDKT ++W ++ + H +D ++ S + + +GS D
Sbjct: 216 CLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGLVFTGSADG 274
Query: 422 TIKLWNTLAECKYT 463
T+K+W + K T
Sbjct: 275 TVKVWRREDQAKDT 288
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++ S WD+T KVW +++ + + H +N V DG L +G D +W D
Sbjct: 225 LLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDG-LVFTGSADGTVKVWRRED 283
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 502
H + +A S D R + SGS DKT K+W +++ + + H D V+ V
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAV 259
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
A SDG + S SWDKTL++W + + + H V ++A S N + +GS D+ I+
Sbjct: 202 AVSDG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVST-NGTVYTGSADRRIR 259
Query: 431 LW 436
+W
Sbjct: 260 VW 261
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/55 (29%), Positives = 31/55 (56%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
I S WD+T+K+W ++ + K + H +N + VS +G++ +G D + +W
Sbjct: 208 IYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV-YTGSADRRIRVW 261
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
DG+ SGS D+++ +W D + R H K +LS+ F+V + ++SGS D+T+
Sbjct: 291 DGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSDL-LLSGSADRTV 348
Query: 428 KLWNTLAECKYTIQD--DGHS 484
++W + Y+ + GH+
Sbjct: 349 RIWRRGPDSSYSCLEVLSGHT 369
Score = 33.1 bits (72), Expect = 0.19
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGSRD 418
A S +GS D+ +R+W G+ E H V ++A + D + SGS D
Sbjct: 242 AVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCD 301
Query: 419 KTIKLW 436
++I +W
Sbjct: 302 RSILVW 307
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 191
S + +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLG----HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
DR ++VW + + + H +N + ++ DGS+ SG D ++W+ D
Sbjct: 255 DRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWERED 311
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 475 WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCK-LKINHLGHSGYLNTVTVSPDG 651
W + + + + ++ S WDR+ K+W ++ K L H +N + VS DG
Sbjct: 188 WVHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDG 247
Query: 652 SLCASGGKDMKAMLWDLND 708
+G D K +W+ D
Sbjct: 248 -FVYTGSADKKIKVWNKKD 265
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+ DG+ S SWD++ ++W + K E D ++ + + +GS DK IK+
Sbjct: 201 SQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKV 260
Query: 434 WN 439
WN
Sbjct: 261 WN 262
Score = 38.3 bits (85), Expect = 0.005
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNR------ 394
C A + LSGS DK+LR+W + E HTK V S+A SV +
Sbjct: 333 CLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDY 392
Query: 395 --QIVSGSRDKTIKLWN 439
+ SGS D ++K+WN
Sbjct: 393 SCMVYSGSLDLSLKVWN 409
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 550 DRTVKVWHLTNCK--LKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
D+ +KVW+ + K L H +N + +S DG + SG D ++W+
Sbjct: 255 DKKIKVWNKKDKKHSLVATLTKHLSAVNALAISEDGKVLYSGACDRSILVWE 306
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWD-LAAG-------KTTRRFEDHTKDVLSVAFSVDNRQIVSG 409
+ DG SG+ D+++ +W+ L G H K ++ +A + D ++SG
Sbjct: 287 SEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSG 344
Query: 410 SRDKTIKLW 436
S DK++++W
Sbjct: 345 SADKSLRVW 353
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 66 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 173
G LRGH + +A D++LS S DK+L VW+
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWR 354
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
+SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 236
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 237 I 239
+
Sbjct: 69 V 69
Score = 35.5 bits (78), Expect = 0.035
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
A D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KL
Sbjct: 120 AIDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKL 176
Query: 434 WNTLAECKYTIQD-DGHSDWV 493
W + K ++Q GH+D V
Sbjct: 177 W----KGKTSLQTLSGHTDTV 193
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFED-----HTKDVLSVAF-----SVDNRQ 397
C +D N A S S D+T+R+W L + + HT V +A+ +
Sbjct: 27 CVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGR 85
Query: 398 IVSGSRDKTIKLWNTL 445
+VSGS D + +WN +
Sbjct: 86 LVSGSMDTFVFVWNLM 101
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
+SGS D + +W+L G+ + + H V VA +DN IVS S D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 236
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 237 I 239
+
Sbjct: 69 V 69
Score = 35.5 bits (78), Expect = 0.035
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
A D +S S D+TL+ W G+ ++ H + +V + + ++VSGS D ++KL
Sbjct: 120 AIDNEDIVSSSVDQTLKRW--RNGQLVESWDAHQSPIQAV-IRLPSGELVSGSSDASLKL 176
Query: 434 WNTLAECKYTIQD-DGHSDWV 493
W + K ++Q GH+D V
Sbjct: 177 W----KGKTSLQTLSGHTDTV 193
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFED-----HTKDVLSVAF-----SVDNRQ 397
C +D N A S S D+T+R+W L + + HT V +A+ +
Sbjct: 27 CVCNDENIATS-SRDRTIRVWSLDPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGR 85
Query: 398 IVSGSRDKTIKLWNTL 445
+VSGS D + +WN +
Sbjct: 86 LVSGSMDTFVFVWNLM 101
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C A SGSWDKTL++W L+ K + H D ++ + D R + S S D +
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGDGR-VYSASADGKV 236
Query: 428 KLW 436
K+W
Sbjct: 237 KIW 239
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/78 (32%), Positives = 38/78 (48%)
Frame = +1
Query: 463 HPR*WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVS 642
H R W + + + HA II S WD+T+KVW L++ K + H +N + V+
Sbjct: 166 HKRLWIEHADSISCLAV-HAG-IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGL-VA 222
Query: 643 PDGSLCASGGKDMKAMLW 696
DG + S D K +W
Sbjct: 223 GDGRV-YSASADGKVKIW 239
Score = 31.1 bits (67), Expect = 0.76
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Frame = +2
Query: 254 ASDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 412
+ DGN+ G W+K + D + H VL + V + SGS
Sbjct: 278 SGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGEMVCSGS 335
Query: 413 RDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRFHP 514
DK+I LW T CK+ + GH V C++ P
Sbjct: 336 ADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQASP 371
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 41.9 bits (94), Expect = 4e-04
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 4/96 (4%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 418
C + G + S+D T +W + E H +V SV+++ + + SRD
Sbjct: 80 CAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRD 139
Query: 419 KTIKLWNTLAECKYTIQD--DGHSDWVSCVRFHPIM 520
K++ +W L +Y GH+ V V++HP M
Sbjct: 140 KSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM 175
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Frame = +1
Query: 523 NPIIVSCGWDRTVKVWHLTN------CKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 684
+PI+ SC D TV++W ++ CK + H+ + + SP G L A+ D
Sbjct: 39 SPILASCSGDNTVRIWEQSSLSRSWTCKTVLEET-HTRTVRSCAWSPSGQLLATASFDGT 97
Query: 685 AMLW 696
+W
Sbjct: 98 TGIW 101
Score = 33.5 bits (73), Expect = 0.14
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Frame = +2
Query: 278 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
S S D T+R+W+ L+ T + E HT+ V S A+S + + + S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKN 103
Query: 443 LA---ECKYTIQDDGHSDWVSCVRFH 511
EC T+ +GH + V V ++
Sbjct: 104 YGSEFECISTL--EGHENEVKSVSWN 127
Score = 30.7 bits (66), Expect = 1.0
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
+ G+ + S DK++ +W++ G HT+DV V + + S S D TI
Sbjct: 128 ASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNTI 187
Query: 428 KLW-----NTLAECKYTI--QDDGHSDWVSCVRFH 511
K+W + +C T+ ++GHS V + F+
Sbjct: 188 KVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFN 222
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
H+ V S++F+ ++V+ S D T+K+W T
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/63 (22%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLK-INHL-GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
++ + +D T +W + + I+ L GH + +V+ + GS A+ +D +W++
Sbjct: 88 LLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEV 147
Query: 703 NDG 711
+G
Sbjct: 148 LEG 150
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSGS 412
C DG G D ++++W L G +R + HT D+ SV FS D R ++S S
Sbjct: 333 CAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRS 392
Query: 413 RDKTIKLWN 439
D ++K+W+
Sbjct: 393 FDGSLKVWD 401
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNRQIVSGS 412
+SDG LS S+D +L++WDL K + FE + +VAFS D + I++G+
Sbjct: 382 SSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGT 437
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 41.9 bits (94), Expect = 4e-04
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 248 CAA--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
C+A DG SG DK ++W L +G H + ++A+ + +GS DK
Sbjct: 77 CSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDK 136
Query: 422 TIKLWNTLAECKYTIQDDGHSDWVSCVRFHPIM 520
T+K W+T + Q + V+ HP+M
Sbjct: 137 TLKYWDTRQQNPVHTQQLPDKCYTLSVK-HPLM 168
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +2
Query: 284 SWDKTLRLWDL-----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
SWD +R W++ + + H + VL A+ D + SG DK K+W L+
Sbjct: 44 SWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLS 103
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
I+V+ WD V+ W ++ + + H + DG+ SGG D +A +
Sbjct: 39 ILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKM 98
Query: 694 WDLNDG 711
W L G
Sbjct: 99 WPLLSG 104
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/56 (26%), Positives = 24/56 (42%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
+ S G D+ K+W L + + H G + + P +L A+G D WD
Sbjct: 87 VFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWD 142
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/89 (24%), Positives = 38/89 (42%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C+ +D +G D LW + G H V +AFS D + + SG D +
Sbjct: 78 CSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVV 137
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
++++ + + DG + VR+HP
Sbjct: 138 QIFDASSGTLKCVL-DGPGAGIEWVRWHP 165
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/36 (47%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 607 GHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLNDG 711
GH G L + SP D +L A+GG D KA LW + +G
Sbjct: 68 GHKGELYALACSPTDATLVATGGGDDKAFLWKIGNG 103
Score = 36.3 bits (80), Expect = 0.020
Identities = 23/92 (25%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDH---TKDVLSVAFSVDNRQIVSGSRDKTIK 430
DG +GS D +L +W+ ++ + H T+ + + + ++ +SGS+D ++
Sbjct: 208 DGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVH 267
Query: 431 LWNTLAECKYTIQDDGHSDWVSCVRFHPIMPT 526
+ N + K + H+D V CV+F P T
Sbjct: 268 IVNIVTG-KVVSSLNSHTDSVECVKFSPSSAT 298
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSGSRDKTI 427
S+ + A+SGS D ++ + ++ GK HT V V FS + I +G DK +
Sbjct: 252 SNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKL 311
Query: 428 KLWN 439
+W+
Sbjct: 312 IIWD 315
Score = 33.1 bits (72), Expect = 0.19
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++ + G D +W + N GH ++ + S DG L ASGG D ++D +
Sbjct: 85 LVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASS 144
Query: 709 G 711
G
Sbjct: 145 G 145
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = +1
Query: 490 GVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGS---LC 660
G+ C + N + + +S D +V + ++ K+ + H+ + V SP + L
Sbjct: 244 GLTC-LDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLA 302
Query: 661 ASGGKDMKAMLWDL 702
A+GG D K ++WDL
Sbjct: 303 ATGGMDKKLIIWDL 316
Score = 31.5 bits (68), Expect = 0.57
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
Y +G + T+ +WD G + H V +++ S + IVS S D T +++ +
Sbjct: 342 YLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Frame = +2
Query: 212 AFIRSFALHF*CCAAS-----DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 376
A +R+F H C + G+ S S D TLR+WD+ +T H ++LS
Sbjct: 140 ASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCD 199
Query: 377 FS-VDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
++ D+ + + S DKT+K+W+ + +GH V V+F P
Sbjct: 200 WNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSP 246
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSGSRDKTIKLWN 439
L+ SWD T++LW + + R F++H V ++ + + S S D T+++W+
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGY-LNTVTVSPD-GSLCASGGKDMKAMLWD 699
I+ + D+TVKVW + + ++ + L GY + V SP SL AS DM LWD
Sbjct: 207 ILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWD 265
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +3
Query: 69 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 206
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTI 427
+S G+ ++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+
Sbjct: 183 SSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTV 242
Query: 428 KLW 436
KLW
Sbjct: 243 KLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSGSRDKTI 427
+S G+ ++ S D +RL+D + K R + H K +V S F+ D R ++S +D T+
Sbjct: 275 SSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTV 334
Query: 428 KLW 436
KLW
Sbjct: 335 KLW 337
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 484 RLGVMCQIP-PNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLC 660
R GV C PN+ I S D +++W +++ + GH G + +T S DG++
Sbjct: 56 RDGVSCMAKNPNYLKGIF-SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVL 114
Query: 661 ASGGKDMKAMLWDL 702
S G D LW++
Sbjct: 115 VSCGTDCTVRLWNV 128
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD---VLSVAFSVDNRQIVSGSRDKTIKL 433
G ++GS+D+++R++ G + + HTK V V +S D ++SGS D ++L
Sbjct: 291 GREFVTGSYDRSVRIFPYNGGHSREIY--HTKRMQRVFCVKYSCDATYVISGSDDTNLRL 348
Query: 434 WNTLA 448
W A
Sbjct: 349 WKAKA 353
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 66 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 179
G + GH V+ +A NP Y I S+S D + +W ++
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDIS 87
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 200 YTSKAFIRSFALHF*CCAASDGNYALSGSWDKTLRLWDLAAGK 328
Y +K R F + + C D Y +SGS D LRLW A +
Sbjct: 317 YHTKRMQRVFCVKYSC----DATYVISGSDDTNLRLWKAKASE 355
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/32 (28%), Positives = 20/32 (62%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYL 624
++VSCG D TV++W++ L+ + + ++
Sbjct: 113 VLVSCGTDCTVRLWNVPRPSLEDSSISSENFI 144
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+ L
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLW 436
N +GS D+T++LWDL+ + + + + +AFS DN +++ G +KLW
Sbjct: 383 NLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLW 442
Query: 437 NTLAE 451
+TL++
Sbjct: 443 DTLSD 447
Score = 34.7 bits (76), Expect = 0.062
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 69 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 188
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 33.5 bits (73), Expect = 0.14
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Frame = +1
Query: 514 NHANPIIVSCGW-DRTVKVWHLTNCKLK--INHLGHSGYLNTVTVSPDGS-LCASGGKDM 681
N + P +++ G DRTVK+W L+N + H ++G L + SPD L A GG
Sbjct: 378 NISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMG 437
Query: 682 KAMLWD 699
+ LWD
Sbjct: 438 ELKLWD 443
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D + SGS D T+ +W++ G T H V V + I S S DKT+ +W
Sbjct: 129 DDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWR 188
Query: 440 TLAECKYTIQDDGH 481
T ++ + DGH
Sbjct: 189 T-SDWGMAHRTDGH 201
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = +2
Query: 311 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDW 490
D+ K HT DV+ + +S D+ + SGS D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 491 VSCVRFHPI 517
V V + PI
Sbjct: 163 VKGVTWDPI 171
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
++ S D TV +W++ GH + VT P GS AS D ++W +D
Sbjct: 132 MLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVIIWRTSD 191
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +1
Query: 580 NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
N K + GH+ + + SPD S+ ASG D +W++ G
Sbjct: 107 NWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTG 150
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 173
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFH 511
++ H+KDV FS +N+ I S S DKTI++W + C I G S C+RFH
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 512 PI 517
P+
Sbjct: 267 PV 268
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+S+ Y S S DKT+R+W+L+ G R + V+N + +G+ +K + +
Sbjct: 225 SSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTV 284
Query: 434 WN 439
+N
Sbjct: 285 FN 286
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +3
Query: 72 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 182
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
D + +SGS D +++WD L + + HT V ++ S D +IVSGS D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVRAI--SSDRGKIVSGSDDLSVIV 923
Query: 434 WNTLAECKYTIQDDGHSDWVSCVR 505
W+ + + GH VSCV+
Sbjct: 924 WDK-QTTQLLEELKGHDSQVSCVK 946
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
S G A +G D +WD+ +GK + + HTK + S+ D +++GS D T ++W
Sbjct: 991 STGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVW 1047
Query: 437 N 439
+
Sbjct: 1048 S 1048
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
+SD +SGS D ++ +WD + + H V V + ++++ + D T+K+
Sbjct: 906 SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKM 964
Query: 434 WNTLAE-CKYTI 466
W+ + C T+
Sbjct: 965 WDVRTDMCVATV 976
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/67 (34%), Positives = 37/67 (55%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 236
+LR TL+GH G V I+++ I+S S D ++IVW D+ + ++ L GH
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW----DKQTTQLLEE-LKGHDSQ 941
Query: 237 ISDVVLL 257
+S V +L
Sbjct: 942 VSCVKML 948
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/61 (21%), Positives = 29/61 (47%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
I+ + G D +W + + K GH+ ++ ++ + D + +G D A +W ++
Sbjct: 994 ILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDTLI--TGSDDWTARVWSVSR 1051
Query: 709 G 711
G
Sbjct: 1052 G 1052
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 41.1 bits (92), Expect = 7e-04
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Frame = +2
Query: 113 SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAASDGNYALSGSWD 292
S+ GH +F S A + + + +I + F + L+ S D
Sbjct: 90 SDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGD 149
Query: 293 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSGSRDKTIKLWN 439
+T+++WD+ K T HT V S+ N +VSGSRD LW+
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 469 R*WTQRLGVMCQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPD 648
R W + I + +++ D+T+KVW + K +GH+G + ++ P
Sbjct: 122 RDWIAHYNAIFDISWIKGDSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPT 181
Query: 649 GS-LCASGGKDMKAMLWDL 702
S L SG +D LWDL
Sbjct: 182 NSDLLVSGSRDGCFALWDL 200
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 48 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 32.7 bits (71), Expect = 0.25
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKL 433
DG Y LSGS D +W + + + H +V +V +S ++ + S D T++L
Sbjct: 349 DGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTVRL 408
Query: 434 WN 439
WN
Sbjct: 409 WN 410
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 637 VSPDGSLCASGGKDMKAMLWDLN 705
+SPDG SG D A +W +N
Sbjct: 346 ISPDGEYVLSGSSDGNAYIWQVN 368
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
+G Y S S D+T +W+++A H K V+++ +S D+RQ+++ ++ I+
Sbjct: 285 NGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEVIR 344
Query: 431 LWNT-LAECKYTIQDDGHSDWVSC 499
W+ +C + + G S +SC
Sbjct: 345 RWDVDSGDCVHMYEKGGISP-ISC 367
Score = 35.9 bits (79), Expect = 0.027
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDG-SLCASGGKDMKAMLWDLN 705
I S D V +WH + KL + GH+G +N V+ SP + AS D +W L+
Sbjct: 504 IASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLD 562
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG ++G D+++ +WDL + T+ V +A + D + +VS +D I L++
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Query: 440 TLAECKYTIQDD 475
A + I+++
Sbjct: 432 REATVERLIEEE 443
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + +S D + L+D A T R + + S + S DN+ I+ ++ I+LWN
Sbjct: 414 DGKWLVSVCKDSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRLWN 471
Query: 440 TLAECKYTIQDDGH 481
+ K + GH
Sbjct: 472 IEGDPKIVSRYKGH 485
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSGSRDKTIKLW 436
+ SGS D + +W + GK H V V++S N + S S D TI++W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDD--GHSDWVSC 499
+T + E HT +V + FS + + + S S+D+T +W A+ +++ GH V
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIA 324
Query: 500 VRFHP 514
+ + P
Sbjct: 325 ILWSP 329
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 90 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 185
W Q + N KY + SSS+D+T I+W+++ D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD 306
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +3
Query: 51 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
T KL L GH G V ++ +P M+ S+S D T+ +W L R
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLT---NCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 684
+H + S D+T +W ++ + LK +GH + + SPD + G +
Sbjct: 283 SHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEV 342
Query: 685 AMLWDLNDG 711
WD++ G
Sbjct: 343 IRRWDVDSG 351
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
S SWD T+++W +A K H + SV D+ + +GS D T+K+W + K
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGK 310
Query: 458 YT 463
T
Sbjct: 311 GT 312
Score = 33.1 bits (72), Expect = 0.19
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
++ S WD T+KVW + + K + H +N+V +S L +G D +W
Sbjct: 249 LLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFDDLVFTGSADGTVKVW 303
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 502
H V S++ V+ + S S D TIK+W +A+ K H D ++ V
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWR-IADSKCLESIHAHDDAINSV 283
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTI 427
N S S DK +++WD+A G E HTK+V +VA++ ++SGS D+T+
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTI 427
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ G +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 428 KLWNTLAE 451
+W+TL +
Sbjct: 475 HVWDTLLD 482
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 505
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 506 FHPI 517
F+P+
Sbjct: 404 FNPV 407
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S N LS S D ++RLW + F H V SV F+ VD+ +SGS D +++
Sbjct: 365 SKNNRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRI 423
Query: 434 WNTLAECK 457
W+ ++C+
Sbjct: 424 WSA-SQCQ 430
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 81 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/64 (29%), Positives = 39/64 (60%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 505
K F H+ D+L +++S +NR ++S S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 506 FHPI 517
F+P+
Sbjct: 404 FNPV 407
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKL 433
S N LS S D ++RLW + F H V SV F+ VD+ +SGS D +++
Sbjct: 365 SKNNRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISGSIDGKVRI 423
Query: 434 WNTLAECK 457
W+ ++C+
Sbjct: 424 WSA-SQCQ 430
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 81 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ + D W + + K+K+ GHS YL+TV S +G +D A +WD G
Sbjct: 174 VFTAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTG 233
Score = 35.1 bits (77), Expect = 0.047
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D WD+ +GK F+ H+ + +V QI++GS D T ++W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C G SGS DKT+++WDL + + H V S+ ++ ++S S D TI
Sbjct: 317 CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTI 374
Query: 428 KLW 436
KLW
Sbjct: 375 KLW 377
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
Frame = +2
Query: 377 FSVDNRQIVSGSRDKTIKLW--NTLAECKYTIQ 469
F V + SGS DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 39.9 bits (89), Expect = 0.002
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFSVDNRQIVS--- 406
+ GN SG D + +WD LA+ K TR RFE+HT V ++A+ +++
Sbjct: 261 SESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGG 320
Query: 407 GSRDKTIKLWNT 442
G D IK WNT
Sbjct: 321 GVGDGKIKFWNT 332
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 281 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 451
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 469
HT++V + +S + SG D + +W+ +LA K T Q
Sbjct: 251 HTEEVCGLKWSESGNKQASGGNDNVVHIWDRSLASSKQTRQ 291
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/67 (32%), Positives = 33/67 (49%)
Frame = +1
Query: 499 CQIPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKD 678
C I P I V+CG D V + K K++ HS ++N V +PDGS + D
Sbjct: 150 CAIKPTRPFRI-VTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSD 208
Query: 679 MKAMLWD 699
K +++D
Sbjct: 209 KKGIIYD 215
Score = 34.7 bits (76), Expect = 0.062
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 305 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGH 481
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 482 SDWVSCVRFHP 514
S++V+CVRF P
Sbjct: 187 SNFVNCVRFAP 197
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
GH G + V+ SPDG + D A +WD++D
Sbjct: 230 GHKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
Score = 31.1 bits (67), Expect = 0.76
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRF------EDHTKDVLSVAFSVDNRQIVSGSR 415
A DG+ ++ S DK ++D GKT + H + +V++S D +Q+++ S
Sbjct: 196 APDGSKFITVSSDKKGIIYD---GKTCEILGELSSDDGHKGSIYAVSWSPDGKQVLTVSA 252
Query: 416 DKTIKLWN 439
DK+ K+W+
Sbjct: 253 DKSAKIWD 260
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/60 (25%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKI-NHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
+ S +R VW + ++K+ N L HS +N + SP+ ++ A+G D ++++++
Sbjct: 505 MFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVATGSLDTCVIVYEVD 564
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
H G ++ + SPD S+ AS + +A++WD
Sbjct: 490 HRGAISVIRYSPDLSMFASADLNREAVVWD 519
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 439
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 CCA---ASDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 412
CC + G GS D + +DL K H K V V F VD+ +VS S
Sbjct: 622 CCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSS 680
Query: 413 RDKTIKLWN 439
D T+KLW+
Sbjct: 681 TDNTLKLWD 689
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 708
+ S ++ V+VW + +L H + ++ S D +L ASG D LW +N
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 709 G 711
G
Sbjct: 609 G 609
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKTIKLWN 439
S +++ +++WD+A + ++H K V S+ + S D + SGS D ++KLW+
Sbjct: 551 SSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWS 605
Score = 31.5 bits (68), Expect = 0.57
Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 CCA---ASDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 412
CC + G GS D + +DL K H K V V F VD+ +VS S
Sbjct: 622 CCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSS 680
Query: 413 RDKTIKLWN 439
D T+KLW+
Sbjct: 681 TDNTLKLWD 689
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWDLND 708
+ S ++ V+VW + +L H + ++ S D +L ASG D LW +N
Sbjct: 549 VASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQ 608
Query: 709 G 711
G
Sbjct: 609 G 609
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
GN ++G D +RL+D GK + H V V F+ SGS D TI++W T
Sbjct: 240 GNKFVAGGEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.7 bits (61), Expect = 4.0
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + +S S D L + G FE H V S + + S S D + KLW+
Sbjct: 30 DGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 440 TL 445
L
Sbjct: 90 AL 91
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 505 IPPNHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMK 684
+ P N + G D V+++ K + GH G ++ V +P G ASG +D
Sbjct: 235 LEPKSGNKFVAG-GEDMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGT 293
Query: 685 AMLW 696
+W
Sbjct: 294 IRIW 297
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
DG A + WD +R+++ G + H +V++S D + S S D T+ LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/58 (31%), Positives = 25/58 (43%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
I + GWD ++V++ H N V+ SPD L AS +D LW L
Sbjct: 322 IAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWKL 379
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
I +CG D V + K +H HS ++N + SPDG+ + D K M++D G
Sbjct: 24 IATCGEDFLVNFYDGPPFKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTG 83
Score = 31.1 bits (67), Expect = 0.76
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNRQIVSGSRDKTIK 430
DG ++ S DK ++D G ED H + +V++S D++++++ S DK+ K
Sbjct: 62 DGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKSAK 121
Query: 431 LW 436
+W
Sbjct: 122 VW 123
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
H G L + SPD ++ ASG + +A++WD
Sbjct: 355 HRGALTVIRYSPDLTMFASGDANREAVVWD 384
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNR-QIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
F+ H++ VLS AF +I + D + ++ K+ HS++V+C+R+ P
Sbjct: 4 FDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDG-PPFKFHSSHREHSNFVNCIRYSP 61
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLW 696
++ S WDRTVKVW + + K + H +N+VT + SL +G D +W
Sbjct: 149 LLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAE--SLVFTGSADGTVKVW 202
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
A D S SWD+T+++W + K + H V SV + + +GS D T+K+
Sbjct: 144 AEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVFTGSADGTVKV 201
Query: 434 W 436
W
Sbjct: 202 W 202
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 37.9 bits (84), Expect = 0.007
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Frame = +2
Query: 290 DKTLRLWDL---AAGKTTRRFEDHTKDVLSVAFSVDNRQIVS-GSRDKTIKLWN--TLAE 451
D+ L +WDL +A K + H+ +V +AF+ N +V+ GS DKT+KL++ L+
Sbjct: 249 DQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLRKLST 308
Query: 452 CKYTIQDDGHSDWVSCVRFHPIMPTPLLYPVVGTEL 559
+T D H + V V ++P T L +G L
Sbjct: 309 ALHTF--DSHKEEVFQVGWNPKNETILASCCLGRRL 342
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 69 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 448
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 449 ECKYTIQDDGHSDWVSCVRFH 511
Q HS W+S ++H
Sbjct: 347 TSAPVFQFSSHSSWISACKWH 367
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWD 313
A GN S SWD T+ LW+
Sbjct: 213 AQKSGNMVCSSSWDCTINLWN 233
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTL--A 448
S SWD ++R WD+ GK + F + + V + I +G D +++W+
Sbjct: 288 SSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRKPG 346
Query: 449 ECKYTIQDDGHSDWVSCVRFH 511
Q HS W+S ++H
Sbjct: 347 TSAPVFQFSSHSSWISACKWH 367
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLA 448
+ LS S+D + LWDL + H VLS + +VSG D +++ + +A
Sbjct: 373 HLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWD 313
A GN S SWD T+ LW+
Sbjct: 213 AQKSGNMVCSSSWDCTINLWN 233
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 37.9 bits (84), Expect = 0.007
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
A S+ + +GS D T++ W L G H K V+S V N + SGS D T++
Sbjct: 593 AYSEYGHVYTGSGDNTIKAWSLQDGSLLCTMSGH-KSVVSTLVVV-NGVLYSGSWDGTVR 650
Query: 431 LWN 439
LW+
Sbjct: 651 LWS 653
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 16/81 (19%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------G 409
SGSWD T+RLW L+ + T D L + + N I+S G
Sbjct: 642 SGSWDGTVRLWSLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTG 701
Query: 410 SRDKTIKLWNTLAECKYTIQD 472
DKTI + L K +QD
Sbjct: 702 GWDKTINVQGNLGRLKRNVQD 722
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 550 DRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
D T+K W L + L GH ++T+ V + SG D LW L+D
Sbjct: 606 DNTIKAWSLQDGSLLCTMSGHKSVVSTLVVV--NGVLYSGSWDGTVRLWSLSD 656
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 556 TVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
TV +W T+ + H G +++V P+G L A+ GK+ K +WDL
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDL 310
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 430
+SDG S D T+++ D GK + H + V F + +IV SGS D ++
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 431 LWNT-LAEC 454
LWN EC
Sbjct: 172 LWNAKTGEC 180
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 356 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFHP 514
+ ++ AFS D R + S D T+K+ + +C + + WV VRFHP
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHP 155
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 430
+SDG S D T+++ D GK + H + V F + +IV SGS D ++
Sbjct: 112 SSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVR 171
Query: 431 LWNT-LAEC 454
LWN EC
Sbjct: 172 LWNAKTGEC 180
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 356 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFHP 514
+ ++ AFS D R + S D T+K+ + +C + + WV VRFHP
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHP 155
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
SGS D +RLW+ G+ R D + + S+AF + S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +2
Query: 332 TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQD---DGHSDWVSCV 502
+R ++ H K V SVA++ + ++ SGS D+T ++WN +D GH+D V +
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQL 72
Query: 503 RFHP 514
+ P
Sbjct: 73 CWDP 76
Score = 36.7 bits (81), Expect = 0.015
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +2
Query: 245 CCAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 424
C + + S DK++RLWD +GK T++ E +++ ++ + D + G+RD
Sbjct: 73 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDE 131
Query: 425 IKL 433
+ +
Sbjct: 132 LTI 134
Score = 33.9 bits (74), Expect = 0.11
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 6/82 (7%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVDNRQIV-SGSRDK 421
S+G SGS D+T R+W++ ++ + HT V + + + +V + S DK
Sbjct: 30 SNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDK 89
Query: 422 TIKLWNTLA-ECKYTIQDDGHS 484
+++LW+ + +C ++ G +
Sbjct: 90 SVRLWDARSGKCTQQVELSGEN 111
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +2
Query: 248 CAASD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
C A D G Y GS D + LWD++ R F V +++F+ I S S D
Sbjct: 196 CIAIDPKGRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDL 255
Query: 422 TIKLWN 439
I + N
Sbjct: 256 FIDIAN 261
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 37.1 bits (82), Expect = 0.012
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 285 NRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTT 334
+GS D+TLR+WD A+G+ T
Sbjct: 168 TGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 48 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 371 VAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQD 472
V V ++ SGS DKTIK+W+ +C T+ D
Sbjct: 278 VTLYVGANRLYSGSMDKTIKVWSLDNLQCIQTLTD 312
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +2
Query: 338 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+ + H K V +A + ++ +GS+D+T+++W+
Sbjct: 146 QLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWD 179
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 37.1 bits (82), Expect = 0.012
Identities = 23/64 (35%), Positives = 30/64 (46%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
C D + S D +R D AGK H K V V +S Q+++GS DKTI
Sbjct: 63 CCFHDDSSGFSVCADTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKTI 121
Query: 428 KLWN 439
K W+
Sbjct: 122 KCWD 125
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRR 340
++GSWDKT++ WD T R
Sbjct: 113 ITGSWDKTIKCWDPRGASGTER 134
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 391
+++ ++ L SWDK++RL+D A G R H VL F D+
Sbjct: 25 SNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDS 69
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKT 424
G SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 425 IKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
+W+ + I D H +V V + P+
Sbjct: 136 CIIWDVNKGSVHQIL-DAHCHYVQGVAWDPL 165
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 182
Query: 440 TLAECK 457
+ K
Sbjct: 183 NKPQTK 188
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 640 SPDGSLCASGGKDMKAMLWDLNDG 711
SPD + SG D ++WD+N G
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKG 144
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSGSRDKT 424
G SG+ L +W L +T + ++ H KDVL + +S D+ ++SGS D +
Sbjct: 76 GELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNS 135
Query: 425 IKLWNTLAECKYTIQDDGHSDWVSCVRFHPI 517
+W+ + I D H +V V + P+
Sbjct: 136 CIIWDVNKGSVHQIL-DAHCHYVQGVAWDPL 165
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 123 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 182
Query: 440 TLAECK 457
+ K
Sbjct: 183 NKPQTK 188
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
H +NT+ SP G L ASG + +W L+
Sbjct: 63 HGCAVNTIRFSPSGELLASGADGGELFIWKLH 94
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 640 SPDGSLCASGGKDMKAMLWDLNDG 711
SPD + SG D ++WD+N G
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKG 144
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIK 430
++DG S D T+++ D G + H + V F + +IV SGS D ++
Sbjct: 115 STDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVR 174
Query: 431 LWN-TLAEC 454
LWN T +EC
Sbjct: 175 LWNTTTSEC 183
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +2
Query: 356 KDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFHP 514
+ ++ AFS D R + S D T+K+ + C + + WV VRFHP
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHP 158
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 463
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 464 IQDDGHSDWVSCVRFH 511
GH V + ++
Sbjct: 219 TLKGGHQSRVGSLAWN 234
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS--- 406
+ G SG D + +WD ++ TT+ R E+HT V ++A+ +++
Sbjct: 275 SGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGG 334
Query: 407 GSRDKTIKLWNT 442
G D+TIK WNT
Sbjct: 335 GGGDRTIKFWNT 346
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 281 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 469
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 305
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYT 463
D T+ LWD + G T+ ++ V S+ ++ D R + G + ++LW++ + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 464 IQDDGHSDWVSCVRFH 511
GH V + ++
Sbjct: 209 TLKGGHQSRVGSLAWN 224
Score = 36.3 bits (80), Expect = 0.020
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVS--- 406
+ G SG D + +WD ++ TT+ R E+HT V ++A+ +++
Sbjct: 265 SGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGG 324
Query: 407 GSRDKTIKLWNT 442
G D+TIK WNT
Sbjct: 325 GGGDRTIKFWNT 336
Score = 31.9 bits (69), Expect = 0.43
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +2
Query: 281 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
G L LW + HT VL +A S D + S + D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 469
+ HT++V + +S +Q+ SG D + +W+ ++A T Q
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 295
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 36.3 bits (80), Expect = 0.020
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
SGS DK++ D+ + + H +V + +S DNR++ SG D + +WN
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 363
Score = 34.3 bits (75), Expect = 0.081
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
HT VL +A S D + IV+G+ D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 33.9 bits (74), Expect = 0.11
Identities = 17/64 (26%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIK 430
D SG D L +W+ + + ++ +HT V ++A+S +++ G+ D+ I+
Sbjct: 346 DNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRCIR 405
Query: 431 LWNT 442
WNT
Sbjct: 406 FWNT 409
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
G + G+ +++WD + K TR E H V ++A+ + + SGSRDK+I
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSI 316
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
SGS DK++ D+ + + + H ++ + +S DNR++ SG D + +WN
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWN 320
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
G + G+ T+++WD+ K R E H V ++A+S + + SGSRDK+I
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSI 273
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
+ N ++ + G+ + + VW GHS + + VSPDG +G D
Sbjct: 389 NVNELVSTHGYSQNQIIVWKYPTMSKLATLTGHSYRVLYLAVSPDGQTIVTGAGDETLRF 448
Query: 694 WDL 702
W++
Sbjct: 449 WNV 451
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 36.3 bits (80), Expect = 0.020
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 341 FEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRFHPI 517
++ HT V S++ I SGS D ++++W C Q D + + CV ++P+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 518 MPTPLLYPVVGTEL 559
P+L +G +L
Sbjct: 476 SRLPVLAVAMGRDL 489
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/39 (25%), Positives = 20/39 (51%)
Frame = +1
Query: 595 INHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
+ + GH+G + +++ G ASG D +W++ G
Sbjct: 417 LEYKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETG 455
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 440 T 442
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 436
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 440 T 442
T
Sbjct: 937 T 937
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 436
DKT+++WD A G FE H V S+ + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 440 T 442
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 436
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 299 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK 457
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVK 498
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 36.3 bits (80), Expect = 0.020
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D T++++++ + + + H+K + +AFS +VS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 440 T 442
T
Sbjct: 948 T 948
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSGSRDKTIKLW 436
DKT+++WD A G FE H V SV + + + I S + D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +2
Query: 299 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTLAECK 457
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVK 498
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 35.9 bits (79), Expect = 0.027
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS-------RDKT 424
N LSG +LRLWD+ A K + +L V F +Q +S S +
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENA 319
Query: 425 IKLWNTLAECKYTIQDDGHSDWVSCVRFHPIMP 523
+ +W+ E + Q + C++ HP P
Sbjct: 320 VIVWDISREVPLSNQVYVEAYTCPCIKRHPQDP 352
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 281 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 451
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/41 (29%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQ 469
HT++V + +S +++ SG D + +W+ +LA T Q
Sbjct: 235 HTEEVCGLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQ 275
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 281 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 451
G L LW + HT VL +A S D + S + D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 296 TLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQ 469
T+ LWD ++G T + ++ V S+ ++ D + G + ++LW+ ++ +
Sbjct: 113 TVYLWDASSGSTYKLVTIDEEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTL 172
Query: 470 DDGHSDWVSCVRFH 511
GH V + ++
Sbjct: 173 RGGHESRVGSLAWN 186
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
HT++V + +S +++ SG D + +W+
Sbjct: 217 HTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 35.9 bits (79), Expect = 0.027
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECK 457
+ LW + H+ VL +A S D + IV+G+ D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 31.9 bits (69), Expect = 0.43
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
SGS D+ + D+ + H +V + +S D+R++ SG D + +WN
Sbjct: 272 SGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWN 326
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/64 (25%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVS---GSRDKTIK 430
D SG D L +W+ + + + +HT V ++ +S +++ G+ D+ I+
Sbjct: 309 DDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRCIR 368
Query: 431 LWNT 442
WNT
Sbjct: 369 FWNT 372
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 517 HANPIIVSCGWDRT-VKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
+ N I+ + G+ + + +W + GHS + + SPDG +G D
Sbjct: 395 NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRF 454
Query: 694 WDL 702
W++
Sbjct: 455 WNV 457
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 35.9 bits (79), Expect = 0.027
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF--SVDNRQIVSGSRDKTI 427
S+G+ +SGS D + +W+ ++ K + HT ++ F + +VSG+ D +
Sbjct: 60 SNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAEV 119
Query: 428 KLWNT 442
+L+NT
Sbjct: 120 RLFNT 124
Score = 34.3 bits (75), Expect = 0.081
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+ E H V ++A++ + ++SGS D I +WN + D GH+ + C +F P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Score = 30.7 bits (66), Expect = 1.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
GH G +N + + +GSL SG D++ +W+
Sbjct: 48 GHQGCVNALAWNSNGSLLISGSDDLRINIWN 78
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 35.5 bits (78), Expect = 0.035
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 505
K + H KDVL + +S D+ ++SGS D + +W+ + I D H +V V
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 102
Query: 506 FHPI 517
+ P+
Sbjct: 103 WDPL 106
Score = 34.7 bits (76), Expect = 0.062
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T +++
Sbjct: 64 DDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIYA 123
Query: 440 TLAECK 457
+ K
Sbjct: 124 NKPQTK 129
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +1
Query: 640 SPDGSLCASGGKDMKAMLWDLNDG 711
SPD + SG D ++WD+N G
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKG 85
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 35.5 bits (78), Expect = 0.035
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = +2
Query: 305 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKTIKLWNTL---AECKYTIQD 472
+WDL AGK+ +E H + + S+ F+ N ++ + S D T LW+ A+ T+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWDLRSMGAKKPKTLST 391
Query: 473 DGHSDWVSCVRFHP 514
HS V F P
Sbjct: 392 VNHSRAVHSAYFSP 405
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
H G +NTV+ + DG + SG D + +LWD
Sbjct: 54 HKGCVNTVSFNADGDILLSGSDDRQVILWD 83
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTI 427
+DG+ LSGS D+ + LWD F+ H ++ F D+R IV+ + DK +
Sbjct: 65 ADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQV 124
Query: 428 K 430
+
Sbjct: 125 R 125
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
++ + H V +V+F+ D ++SGS D+ + LW+ D GH + + +F P
Sbjct: 49 KKLDKHKGCVNTVSFNADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMP 108
>At2g47790.1 68415.m05965 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; The first 3 exons are
identical to that of GB:AJ224957. This gene appears to
be a truncated version of that in GB:AJ224957; contains
4 WD-40 repeats (PF00400)
Length = 392
Score = 35.1 bits (77), Expect = 0.047
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
S S D T+R WD + + R + + +++ S ++ +++G + + LW+
Sbjct: 104 SCSSDGTIRSWDTRSFQQVSRIDTGNDQEIFSFSYGGAADNLLAGGCKEQVLLWDWRNSK 163
Query: 455 KYTIQDDGHSDWVSCVRFHPIMPTPLL 535
+ ++ H D V+ V F P P LL
Sbjct: 164 QVACLEESHMDDVTQVHFVPNKPNKLL 190
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 34.7 bits (76), Expect = 0.062
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = +2
Query: 284 SWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
S ++LR + + R F+ H V+S+ S N +SGS D++++LW+
Sbjct: 91 STGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWD 142
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 412
DG Y LSGS D TL W++ R+E++ V + ++ V+ S
Sbjct: 255 DGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 29.1 bits (62), Expect = 3.1
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
++DG L + + + + D G+ F E + F+ D + ++SGS D T+
Sbjct: 209 SNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFTPDGKYVLSGSGDGTL 268
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
WN + + + + VSC+++ P
Sbjct: 269 HAWN-IENPSEVARWENNIGVVSCLKWAP 296
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 34.7 bits (76), Expect = 0.062
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 436
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 445
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 34.7 bits (76), Expect = 0.062
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSGSRDKTIKLW 436
DKT+++WD G FE H V SV +N Q I S + D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D +++++++ + + + H K V +AFS +VS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQ--IVSGSRDKTIKLWNTL 445
H +V +AFS N+Q +V+ DKTIK+W+ +
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAV 496
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 34.7 bits (76), Expect = 0.062
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 248 CAA--SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDK 421
C+A DG +G DK ++W L +G H +A+ +V+GS DK
Sbjct: 78 CSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDK 137
Query: 422 TIK 430
T+K
Sbjct: 138 TLK 140
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINH-----LGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
I+V+ WD V+ W +T I + H + DG+ +GG D +A +
Sbjct: 40 ILVATSWDCQVRCWEITRSDGSIASEPKVSMSHDQPVLCSAWKDDGTTVFTGGCDKQAKM 99
Query: 694 WDLNDG 711
W L G
Sbjct: 100 WPLLSG 105
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 496 MCQIPPNHANP-IIVSCGWDRTVKVWHLTNC--KLKINHLGHSGYLNTVTVSP-DGSLCA 663
+C + N P +++SCG D ++W + K ++ L H +N+ SP G+
Sbjct: 315 VCGLDCNPVQPELLLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFSPSSGTKIL 374
Query: 664 SGGKDMKAMLWD 699
+ +D + +WD
Sbjct: 375 TTCQDNRIRIWD 386
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 34.3 bits (75), Expect = 0.081
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
A D SGSWD ++R+WD ++ K + H+ V +A SGS + +
Sbjct: 264 ALDMTSIFSGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLAPHETTLASTSGS---DVYI 319
Query: 434 WNTLAECKYTIQDDGH 481
W+ +E I D H
Sbjct: 320 WDVSSETPLAIIPDAH 335
Score = 33.5 bits (73), Expect = 0.14
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAA---GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
+DG S D L+DL KT R H + S+A +D I SGS D ++
Sbjct: 222 TDGFIHCWKSLDGLRNLFDLTGFQKEKTEFRLWGHEGPITSLA--LDMTSIFSGSWDMSV 279
Query: 428 KLWN-TLAECKYTIQDDGHSDWV 493
++W+ + +C T++ HSDWV
Sbjct: 280 RIWDRSSMKCVKTLR---HSDWV 299
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 34.3 bits (75), Expect = 0.081
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 CCAA--SDGNYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSGS 412
CC SD +L+ GS D + +DL K H+K V V F VD+ +VS S
Sbjct: 664 CCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSS 722
Query: 413 RDKTIKLWN 439
D T+KLW+
Sbjct: 723 TDNTLKLWD 731
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSGSRDKT 424
S ++D +++WD+A + ++H K V S+ S D + SGS D T
Sbjct: 601 SSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSDDGT 650
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 60 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 209
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.081
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 60 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 209
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.081
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 69 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 173
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
Score = 31.5 bits (68), Expect = 0.57
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 8/65 (12%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKA 687
+ S G D TVKVW +N K++ H+ ++ V +P+ S ASG +D K
Sbjct: 179 LASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKV 238
Query: 688 MLWDL 702
++W +
Sbjct: 239 IIWTI 243
Score = 30.7 bits (66), Expect = 1.0
Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Frame = +2
Query: 248 CAASDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR--QIVS 406
C ASDGN ++ G WD T G T+ + T+ V+ + + ++ S
Sbjct: 122 CGASDGNISVFSARADGGWDTTKIDQAHPVGVTSVSWAPATEPGALVSSGMIDPVYKLAS 181
Query: 407 GSRDKTIKLW---NTLAECKYTIQDDGHSDWVSCVRFHPIMPTPLLYPVVGTE 556
G D T+K+W N + + H+DWV V + P + P G+E
Sbjct: 182 GGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSE 234
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 33.9 bits (74), Expect = 0.11
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +2
Query: 338 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+ H V +V F+ +VSGS D+ I LWN L+ + GH + V +F P
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIP 108
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
GH G +N V + G + SG D + MLW+ G
Sbjct: 53 GHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSG 87
Score = 31.5 bits (68), Expect = 0.57
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--SVDNRQIVSGSRDKTI 427
S G+ +SGS D+ + LW+ +G + H ++V F D+R I++ D +
Sbjct: 65 STGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQV 124
Query: 428 KLWNTLAECK 457
+L L K
Sbjct: 125 RLGQILENGK 134
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSP-DGSLCASGGKDMKAMLWD 699
+VS G D VK W + + + LGH Y+ SP + S+ +G D +WD
Sbjct: 151 LVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWD 207
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSGSRDKTIKLW 436
D + +SG D ++ WD+A H V S V++ +V+GS D T+K+W
Sbjct: 147 DKLHLVSGGDDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVW 206
Query: 437 NTLAECKYTIQDDGHSDWVSCVRFHP 514
+ I + H V V + P
Sbjct: 207 DARVHTSNWIAEINHGLPVEDVVYLP 232
Score = 32.3 bits (70), Expect = 0.33
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +1
Query: 529 IIVSCGWDRTVKVW----HLTNCKLKINHLGHSGYLNTVTVSPDGSLCA-SGGKDMKAML 693
++V+ +D TVKVW H +N +IN H + V P G L A +GG +K +
Sbjct: 193 MLVTGSYDHTVKVWDARVHTSNWIAEIN---HGLPVEDVVYLPSGGLIATAGGNSVK--V 247
Query: 694 WDLNDG 711
WDL G
Sbjct: 248 WDLIGG 253
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/87 (19%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSGSRDKT 424
C+ + + ++GS+D T+++WD + E +H V V + + + +++ + +
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVY-LPSGGLIATAGGNS 244
Query: 425 IKLWNTLAECKYTIQDDGHSDWVSCVR 505
+K+W+ + K + H+ V+ +R
Sbjct: 245 VKVWDLIGGGKMVCSMESHNKTVTSLR 271
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 69 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 173
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
Score = 32.7 bits (71), Expect = 0.25
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKLKINHL----GHSGYLNTVTVSPD----GSLCASGGKDMKA 687
+ S G D TVKVW L N K++ H+ ++ V +P+ S ASG +D K
Sbjct: 179 LASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGKV 238
Query: 688 MLW 696
++W
Sbjct: 239 IIW 241
Score = 28.7 bits (61), Expect = 4.0
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Frame = +2
Query: 248 CAASDGNYAL-----SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNR--QIVS 406
C +SDGN ++ G WD + G T+ + T V+ + + ++ S
Sbjct: 122 CGSSDGNISVFTARADGGWDTSRIDQAHPVGVTSVSWAPATAPGALVSSGLLDPVYKLAS 181
Query: 407 GSRDKTIKLWNTL-----AECKYTIQDDGHSDWVSCVRFHPIMPTP 529
G D T+K+W +C +Q H+DWV V + P + P
Sbjct: 182 GGCDNTVKVWKLANGSWKMDCFPALQK--HTDWVRDVAWAPNLGLP 225
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 33.9 bits (74), Expect = 0.11
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTT 334
A +DG Y LS D +RLWD+ +G+ T
Sbjct: 320 ATNDGMYLLSAGSDSRIRLWDIESGRNT 347
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 293 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
H G + + + DG S G D + LWD+ G
Sbjct: 311 HYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESG 344
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWD 699
H G +NTV+ + +G + SG D + +LWD
Sbjct: 58 HKGCVNTVSFNAEGDVLISGSDDRRVVLWD 87
Score = 33.1 bits (72), Expect = 0.19
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 335 RRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRFH 511
++ E H V +V+F+ + ++SGS D+ + LW+ L K + GH++ V +F
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHANNVFQAKFM 111
Query: 512 P 514
P
Sbjct: 112 P 112
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +2
Query: 257 SDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSGSRDKTI 427
++G+ +SGS D+ + LWD G F H +V F D+R IV+ + D +
Sbjct: 69 AEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGMV 128
Query: 428 K 430
+
Sbjct: 129 R 129
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
SG D ++R+W++ T ++ +H V + S ++SGS DKTI++W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 245 CCAASD-GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 361
C + S+ G LSGS DKT+R+W + GK TKD
Sbjct: 900 CFSLSETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G ++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + +S S D L + G FE H V S + + S S D + KLW+
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 440 TL 445
L
Sbjct: 90 AL 91
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G ++G D +R++D G+ + H V V F+ SGS D TI++W T
Sbjct: 240 GEKFVAGGEDMWVRVFDFYTGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIWQT 299
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
+RLWD+ +GK + E + V S S D R I + T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/62 (30%), Positives = 26/62 (41%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + +S S D L + G FE H V S + + S S D + KLW+
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 440 TL 445
L
Sbjct: 90 AL 91
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
D N G D T+ ++++ + + + H K + +AFS +VS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 33.1 bits (72), Expect = 0.19
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSGSRD 418
A + + +S S DKTLR+WDL T + F + H V FS+ + ++S SR+
Sbjct: 462 APESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKDVISISRN 516
Score = 32.3 bits (70), Expect = 0.33
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 75 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 31.9 bits (69), Expect = 0.43
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 427
Y LSGS D+ + LWD++A + +E H + V++ + N + S D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+W+T + Q H V+ + F+P
Sbjct: 243 VIWDTRTN-QMQHQVKVHEREVNYLSFNP 270
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDL 702
++ + D TV ++ L ++ + H G + V P+ ++ AS G+D + M+WDL
Sbjct: 275 VLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDL 334
Query: 703 N 705
N
Sbjct: 335 N 335
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.19
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +2
Query: 281 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAE 451
G L LW + HT VL +A S + + S + D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 32.7 bits (71), Expect = 0.25
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 6/86 (6%)
Frame = +2
Query: 281 GSWDKTLRLWDLAA--GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
GS+D +W+ A ++ H +V SV+++ + + RDK++ +W E
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 455 KYTIQD----DGHSDWVSCVRFHPIM 520
GHS+ V V +HP M
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTM 151
Score = 31.5 bits (68), Expect = 0.57
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 173
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +3
Query: 21 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 200
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 201 IPQKRLYGHSHFISDVV 251
L GHS + V+
Sbjct: 130 DTIAVLTGHSEDVKMVL 146
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLT------NCKLKINHL--GHSGYLNTVTVSPDGSLCASGGKDMK 684
++ SC +D T+K+W NC ++ L GHS + +++ + G + D+
Sbjct: 153 VLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMVTCSDDLA 212
Query: 685 AMLW 696
+W
Sbjct: 213 VKIW 216
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
GH + +V+ + GSL A+ G+D +W++
Sbjct: 90 GHESEVKSVSWNASGSLLATCGRDKSVWIWEI 121
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Frame = +2
Query: 248 CAASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SGSRDKT 424
C + Y +G +R+ D+ + + H V + Q+V + S+D++
Sbjct: 93 CGVNGNPYVAAGGVKGIIRVIDVNSETIHKSLVGHGDSVNEIRTQPLKPQLVITASKDES 152
Query: 425 IKLWNTLAECKYTI--QDDGHSDWVSCVRFHP 514
++LWN I GH V V FHP
Sbjct: 153 VRLWNVETGICILIFAGAGGHRYEVLSVDFHP 184
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 32.7 bits (71), Expect = 0.25
Identities = 20/62 (32%), Positives = 27/62 (43%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
DG + +S S D L + G FE H V S + + + S S D T K+WN
Sbjct: 25 DGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWN 84
Query: 440 TL 445
L
Sbjct: 85 AL 86
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
GN ++G D + +D G+ + H V V ++ SGS D T+++W
Sbjct: 235 GNTFIAGGEDMWVHRFDFQTGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIW 292
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +3
Query: 72 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 182
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
Score = 31.9 bits (69), Expect = 0.43
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SGSRDKTI 427
Y LSGS D+ + LWD++A T + +E H + VA+ + N I S D +
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 428 KLWNTLAECKYTIQDDGHSDWVSCVRFHP 514
+W+ L + Q H ++ + F+P
Sbjct: 244 VIWD-LRTNQMQHQVKVHEREINYLSFNP 271
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLG-HSGYLNTVTVSPDG-SLCASGGKDMKAMLWDL 702
++ + D TV ++ L ++ L H G + V P+ ++ AS G+D + M+WD+
Sbjct: 276 VLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDI 335
Query: 703 N 705
N
Sbjct: 336 N 336
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 32.3 bits (70), Expect = 0.33
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 278 NRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
ASD + S D TL + +L K + E ++LSV + R+++ G+++ T+ L
Sbjct: 87 ASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLL 146
Query: 434 --WNTLAEC 454
W +C
Sbjct: 147 YSWGFFKDC 155
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKL 433
ASD + S D TL + +L K + E ++LSV + R+++ G+++ T+ L
Sbjct: 144 ASDSMKLVVTSGDGTLSVCNLRTSKVQSQSEFSEDELLSVVIMKNGRKVICGTQNGTLLL 203
Query: 434 --WNTLAEC 454
W +C
Sbjct: 204 YSWGFFKDC 212
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 31.9 bits (69), Expect = 0.43
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 529 IIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLN 705
++VS TV+ W + L H H G +NT+ +P + S G D + +L+ L+
Sbjct: 261 VLVSGDSTGTVQFWDSEHGTLLEAHSNHKGDVNTLAAAPSHNRVFSAGADGQVILYKLS 319
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 365 LSVAFSVDNRQIVSGSRDKTIKLWN 439
LSV +S D ++I SGS D I+ W+
Sbjct: 202 LSVTWSPDAKRIFSGSSDGLIRCWD 226
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 31.9 bits (69), Expect = 0.43
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +2
Query: 305 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +3
Query: 72 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 176
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 326 KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
K + E H + + + +++ Q + SRDKT+K+W+
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWS 724
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 57 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 185
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 31.5 bits (68), Expect = 0.57
Identities = 16/80 (20%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSGSR 415
+G + + ++ +++W++ K + + H V + FS ++ QI++ S+
Sbjct: 250 NGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASK 309
Query: 416 DKTIKLWNTLAECKYTIQDD 475
D +I++WN +Y + +D
Sbjct: 310 DGSIRVWN--INVRYHLDED 327
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.5 bits (68), Expect = 0.57
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 350 HTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
H K V V +S Q+++GS DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 27.9 bits (59), Expect = 7.1
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +2
Query: 275 LSGSWDKTLRLWD 313
++GSWDKT++ WD
Sbjct: 114 ITGSWDKTVKCWD 126
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 350 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 487
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = +2
Query: 350 HTKDVLSVAFSV---DNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHSD 487
H V VAFS+ R ++SG DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
Score = 27.5 bits (58), Expect = 9.3
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Frame = +1
Query: 502 QIPPNHANPIIVSCGWDRTVKVWHL-TNCKLKINHLGHSGYLNTVTVSPDGSL-CASGGK 675
Q+ N + + S VK+ L C K GH+ ++V P +GG
Sbjct: 110 QVVCNGRSSFLASADDSGDVKIIDLGQKCLYKTLRAGHTSICSSVQFIPWRPWEVITGGL 169
Query: 676 DMKAMLWDLNDG 711
D K +LWD + G
Sbjct: 170 DSKLVLWDFSKG 181
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 31.1 bits (67), Expect = 0.76
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 15/77 (19%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAFSVD 388
+SDG Y +G D + LWD+ + + F H V S+ F
Sbjct: 215 SSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREG 274
Query: 389 NRQIVSGSRDKTIKLWN 439
++ SGS D T+ +WN
Sbjct: 275 TAELFSGSYDGTLSIWN 291
Score = 28.3 bits (60), Expect = 5.3
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +2
Query: 299 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDL 702
H+ + VS DG A+GG D LWD+
Sbjct: 205 HNKQSLALAVSSDGRYLATGGVDCHVHLWDI 235
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 275 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 382
+SGS D T+R+WDL +G H V + S
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 31.1 bits (67), Expect = 0.76
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAG 325
Y +SGS D T+RLWD+ +G
Sbjct: 221 YLMSGSGDSTVRLWDITSG 239
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/43 (30%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 147 RDKTLIVWKLTRDENNYGIPQKRLYGHSH-FISDVVLLVTVIT 272
R+ ++++KL R+E +Y + + LYG H ++ +VL ++ +T
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCHRCLTSLVLCLSEVT 313
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
D N G D ++ ++++ + + + H K + +AFS +VS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 532 IVSCGWDRTVKVWHLTNCKL 591
+V+CG D+ +KVW L+ KL
Sbjct: 470 VVTCGDDKLIKVWDLSGKKL 489
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 610 HSGYLNTVTVSPDGSLCASGGKDMKAMLWDLNDG 711
HS +N + S DG+ SGG++ ++W L+ G
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTG 315
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVSGSRDKTIK 430
+ S+DK ++LWDL + + TK + V FS D+R +++ + D ++
Sbjct: 601 TSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.3 bits (65), Expect = 1.3
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 323 GKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G ++H V +A S D+ VS S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +3
Query: 60 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 224
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +2
Query: 263 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNT 442
G+ G D ++ + L++ K + E H + + +AFS +VS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
Query: 443 LAECKYT 463
+ K T
Sbjct: 541 KSWVKLT 547
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +2
Query: 203 TSKAFIRSFALHF*C---CAASDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 370
T+ A + FA H+ + DG A+ G + L L D +GK E H S
Sbjct: 266 TNFALLNRFAFHWSVNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLDYSFS 324
Query: 371 VAFSVDNRQIVSGSRDKTIKLWN 439
A+ + + + +G++D T +LW+
Sbjct: 325 SAWHPNGQILATGNQDTTCRLWD 347
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
GH Y + P+G + A+G +D LWD+ +
Sbjct: 317 GHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRN 350
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTT 334
A +DG Y LS +RLWD+ +G+ T
Sbjct: 320 ATNDGMYLLSAGSYSRIRLWDIESGRNT 347
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/49 (22%), Positives = 29/49 (59%)
Frame = +2
Query: 293 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
KT++ + + +G+TT H + V + F+ +++++ + D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Frame = +2
Query: 266 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSGSRDKTIK 430
N +GS D WD+ R F++ HT V ++ + D I +GS D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 431 LWNT 442
+W+T
Sbjct: 237 VWDT 240
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/26 (46%), Positives = 21/26 (80%), Gaps = 3/26 (11%)
Frame = +2
Query: 245 CCAASDGN--YAL-SGSWDKTLRLWD 313
CC +S+ + Y++ +GS+D+TLR+WD
Sbjct: 214 CCISSNPSDPYSIFTGSYDETLRVWD 239
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.9 bits (64), Expect = 1.8
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 209
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 210 KRLYGHSHFISDVVLLVTVITHFPVLGTRLCVCGISLQARLPDD 341
+Y + V +V+ + + G L V S +LP D
Sbjct: 3370 TVVYINDLTGEIVTAAGSVLAVWSINGDCLSVVNTS---QLPTD 3410
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLW-DLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKT 424
A S + +SGS D L+ W G + + F H + +A S+D + S D
Sbjct: 77 AVSAAEFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSIDGLLCCTISNDHA 136
Query: 425 IKLWNTL 445
+K+++ +
Sbjct: 137 VKIYDVV 143
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +2
Query: 260 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 385
DG ++ D L+LW + G+ R +E H + V SV
Sbjct: 123 DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSV 164
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 8/71 (11%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKL-KINHLGHSG------YLNTVTVSPDGS-LCASG 669
NH N ++ S G D+ + +W L + G G L+ ++ S GS SG
Sbjct: 52 NHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDSAEECLSAISFSKKGSRYICSG 111
Query: 670 GKDMKAMLWDL 702
G +WDL
Sbjct: 112 GTGQIVKIWDL 122
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +2
Query: 269 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGS 412
Y SG + +++WDL ++ + HT + V ++ + + S S
Sbjct: 107 YICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 290 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTI 427
D+T R+W+L GK + D KD + + R++ G D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 21 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 176
L+ P S S + L H G V + N K P+ + S + D T+ +W L
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 607 GHSGYLNTVTVSPDGSLCASGGKDMKAMLWDLND 708
GH Y P+G + A+G +D LWD+ +
Sbjct: 288 GHKDYSFASAWHPNGLILATGNQDTACRLWDIRN 321
>At5g13850.1 68418.m01619 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 159
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 701 RSHNIAFMSLPPDAHKEPSGDTVTVF 624
+S NI F+ PD K P+ DT +F
Sbjct: 84 KSKNILFVISKPDVFKSPASDTYVIF 109
>At3g12390.1 68416.m01544 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 203
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 701 RSHNIAFMSLPPDAHKEPSGDTVTVF 624
+S NI F+ PD K P+ DT +F
Sbjct: 88 KSKNILFVISKPDVFKSPASDTYVIF 113
>At1g27470.1 68414.m03349 transducin-related / WD-40 repeat
protein-related contains 6 WD-40 repeats (PF00400) (2
weak); related to KIAA1988 protein (GI:18916910) [Homo
sapiens]
Length = 810
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 353 TKDVLSVAFSVDNRQIVSGSRDKTIKLWN 439
T LSV +S D ++I SGS D I+ W+
Sbjct: 198 TGRALSVTWSADAQRIFSGSSDGLIRCWD 226
>At5g59120.1 68418.m07409 subtilase family protein contains
similarity to prepro-cucumisin GI:807698 from [Cucumis
melo]; non-consensus AA acceptor site at exon 6
Length = 732
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 491 VSCVRFHPIMPTPLLYPVVGTELSRSGISLTVS 589
V+C I+P L YP + +LS SG + TV+
Sbjct: 614 VTCSEAKKILPRNLNYPSMSAKLSGSGTTFTVT 646
>At5g59110.1 68418.m07407 subtilisin-like serine protease-related
similar to prepro-cucumisin GI:807698 from [Cucumis
melo], subtilisin-like protease C1 [Glycine max]
GI:13325079
Length = 172
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 491 VSCVRFHPIMPTPLLYPVVGTELSRSGISLTVS 589
++C + + +P L YP + +L RS SLTV+
Sbjct: 53 ITCTKENKTLPRNLNYPSMSAQLRRSESSLTVT 85
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 336 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 395
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K + D + +S + F P
Sbjct: 396 KKEQEIDFFGE-ISGISFSP 414
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 305 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 484
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 303 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 362
Query: 485 DWVSCVRF 508
V +RF
Sbjct: 363 GAVRSIRF 370
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +2
Query: 278 SGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAEC 454
+G+ DKT R+WD ++ + + V S+ F+ D R + + +++T +
Sbjct: 330 TGNQDKTCRIWDTRKLSESVAVLKGNLGAVRSIRFTSDGRYVAMAEPADFVHIYDTKSGY 389
Query: 455 KYTIQDDGHSDWVSCVRFHP 514
K + D + +S + F P
Sbjct: 390 KKEQEIDFFGE-ISGISFSP 408
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +2
Query: 305 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLAECKYTIQDDGHS 484
L D + G+T + H + A+ + +G++DKT ++W+T + G+
Sbjct: 297 LVDTSNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNL 356
Query: 485 DWVSCVRF 508
V +RF
Sbjct: 357 GAVRSIRF 364
>At5g01290.1 68418.m00039 mRNA capping enzyme family protein similar
to mRNA capping enzyme [Xenopus laevis] GI:7239232;
contains Pfam profiles PF01331: mRNA capping enzyme
catalytic domain, PF03919: mRNA capping enzyme
C-terminal domain
Length = 607
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 511 PNHANPIIVSCGWDRTVKVW 570
P+ N IV C WD+ KVW
Sbjct: 527 PSSYNGKIVECAWDKDKKVW 546
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 338 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 338 RFEDHTKDVLSVAFSVDNRQIVSGSRDKTIKLW 436
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 21 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 188
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 7.1
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +3
Query: 21 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 188
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = +1
Query: 514 NHANPIIVSCGWDRTVKVWHLTNCKLKINHLGHSGYLNTVTVSPDGSLCASGGKDMKAML 693
N + ++ + G D +K+ + + + GH G + + P+G L AS +
Sbjct: 113 NGSGSLLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLC 172
Query: 694 WDLNDG 711
W+L +G
Sbjct: 173 WELQNG 178
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +2
Query: 254 ASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 382
+ DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 394 SEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 27.9 bits (59), Expect = 7.1
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +3
Query: 45 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 170
S T+ RG GH V +A +P S D LI+W
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
>At4g10480.1 68417.m01720 nascent polypeptide associated complex
alpha chain protein, putative / alpha-NAC, putative
similar to alpha-NAC, non-muscle form [Mus musculus]
GI:1666690; contains Pfam profiles PF01849: NAC domain,
PF00627: UBA/TS-N domain
Length = 212
Score = 27.5 bits (58), Expect = 9.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 701 RSHNIAFMSLPPDAHKEPSGDTVTVF 624
RS N+ F+ PD K P+ +T +F
Sbjct: 93 RSKNVLFVISKPDVFKSPNSETYVIF 118
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 114 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 209
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At2g35510.1 68415.m04349 WWE domain-containing protein contains
Pfam domain, PF02825: WWE domain
Length = 568
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +2
Query: 512 PIMPTPLLYPVVGTELSRSGISLTVS 589
PIMP PLL+ + ++++R + L ++
Sbjct: 502 PIMPFPLLFKAISSKIARKDMDLIIA 527
>At1g71310.3 68414.m08231 expressed protein
Length = 165
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 568 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 654
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g71310.2 68414.m08230 expressed protein
Length = 176
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 568 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 654
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g71310.1 68414.m08229 expressed protein
Length = 176
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 568 WHLTNCKLKINHLGHSGYLNTVTVSPDGS 654
WH+ N + ++ SG + +VT SPDG+
Sbjct: 85 WHIVNRIMNMHAPEWSGEVRSVTYSPDGN 113
>At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 512
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 239 F*CCAASDGNYALSGSWDKTLRLWDLAAGKT 331
F CC + +G A +GS+ R++ +A G T
Sbjct: 402 FECCISGNGLRAATGSYSNLFRVFGVAPGST 432
>At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 513
Score = 27.5 bits (58), Expect = 9.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 239 F*CCAASDGNYALSGSWDKTLRLWDLAAGKT 331
F CC + +G A +GS+ R++ +A G T
Sbjct: 403 FECCISGNGLRAATGSYSNLFRVFGVAPGST 433
>At1g33040.1 68414.m04068 nascent polypeptide-associated complex
(NAC) domain-containing protein similar to alpha-NAC,
non-muscle form [Mus musculus] GI:1666690; contains Pfam
profile PF01849: NAC domain
Length = 209
Score = 27.5 bits (58), Expect = 9.3
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 701 RSHNIAFMSLPPDAHKEPSGDTVTVF 624
R+ N+ F+ PD +K P+ +T +F
Sbjct: 90 RAKNVLFVISKPDVYKSPNAETYVIF 115
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +2
Query: 251 AASDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSGSRD 418
A + + ++G+ D + +WDL+ G D +S + D+R I S D
Sbjct: 1130 AGTISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRNICIASED 1185
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 346 LESSGSLACSEIPQTQSLVPRTGKCVITVTSSTTSEMKCE 227
L L E+ QTQ +V + K VIT+ T E CE
Sbjct: 271 LREKTKLEKEELLQTQLVVAPSQKPVITIDHQATKEKHCE 310
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,062,765
Number of Sequences: 28952
Number of extensions: 377311
Number of successful extensions: 2593
Number of sequences better than 10.0: 233
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2445
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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