Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30011
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    21   6.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   6.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.3  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 76  VSGHRCSWTSAIPGAEPSC 20
           +S   C W   I G E SC
Sbjct: 94  ISTEHCDWLYGIFGHETSC 112


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -1

Query: 524 KYSNLIENFVGEIQAVTIKYRLVK 453
           KY NL+E     +  V   Y LVK
Sbjct: 121 KYRNLLETTTRRLAFVNSAYTLVK 144


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 43  LLTSMSNGDHLLSGGQYARENKKKT 117
           L  S++  +HLLS GQ+  ++  K+
Sbjct: 218 LTHSLAASNHLLSSGQHLLQDTYKS 242


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 512 SLNIYKLRITATGLSSAEQFHQLGG 586
           SLN     + + GLSS+  F  +GG
Sbjct: 69  SLNGLTNNVPSNGLSSSGPFSSIGG 93


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 347 KLAT*LRLKCYHYNFKIKF*CSYFDQSSKFYFSSENYISINLIDIL 210
           KL   L++   H N + K     F  S+ F++S ++Y+S    +I+
Sbjct: 95  KLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIM 140


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -1

Query: 347 KLAT*LRLKCYHYNFKIKF*CSYFDQSSKFYFSSENYISINLIDIL 210
           KL   L++   H N + K     F  S+ F++S ++Y+S    +I+
Sbjct: 95  KLLKNLKMVQNHNNIREKSHYCLFVASNCFFWSYQSYMSYIFANIM 140


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 539 LYGACKYSNLIENFVGEIQAVTIKYRLV 456
           ++ AC Y  +    V ++  VT+ Y +V
Sbjct: 352 VFSACDYFTIETKTVLDVLGVTVTYLIV 379


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 539 LYGACKYSNLIENFVGEIQAVTIKYRLV 456
           ++ AC Y  +    V ++  VT+ Y +V
Sbjct: 278 VFSACDYFTIETKTVLDVLGVTVTYLIV 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,129
Number of Sequences: 336
Number of extensions: 2926
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)