Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30009
         (667 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    26   1.2  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    26   1.2  
AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific do...    25   2.1  
AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    25   2.1  
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   8.7  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       HL A HS
Sbjct: 149 GTSSVPLTIHRRSPGVPHHVAEPQHLGATHS 179


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       HL A HS
Sbjct: 149 GTSSVPLTIHRRSPGVPHHVAEPQHLGATHS 179


>AY903308-1|AAX48940.1|  241|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 241

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       H+ A HS
Sbjct: 125 GTSSVPLTIHRRSPGVPHHVPEPQHMGATHS 155


>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 224 GTRTVPLK--RRSPSTPLRRKSVLHLVAVHS 310
           GT +VPL   RRSP  P       H+ A HS
Sbjct: 125 GTSSVPLTIHRRSPGVPHHVPEPQHMGATHS 155


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 9/21 (42%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -3

Query: 137 CI*PSCGTSWXWRN-ASLRCP 78
           C   +CGT W +R+ +SL  P
Sbjct: 206 CCRKTCGTGWKYRSISSLHAP 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,098
Number of Sequences: 2352
Number of extensions: 13486
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66486645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)