Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30008X
(594 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 131 3e-31
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 31 0.82
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 0.82
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 0.82
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 31 0.82
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 2.5
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 2.5
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 2.5
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.3
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 3.3
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 29 3.3
AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cel... 28 5.8
AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein. 28 5.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 131 bits (317), Expect = 3e-31
Identities = 58/86 (67%), Positives = 71/86 (82%)
Frame = +1
Query: 253 PADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 432
PADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+EPRLL++ DP D
Sbjct: 71 PADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPRLLVISDPRID 130
Query: 433 HQPITEASYVNIPVIALCNTDSPLRL 510
HQ +TEASYV +PVI+ NT+SPL+L
Sbjct: 131 HQAVTEASYVGVPVISFVNTESPLKL 156
Score = 101 bits (243), Expect = 3e-22
Identities = 45/71 (63%), Positives = 57/71 (80%)
Frame = +2
Query: 44 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 223
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 224 AARAVVAIENP 256
AARA+ A+ENP
Sbjct: 61 AARAIAAVENP 71
Score = 34.7 bits (76), Expect = 0.050
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 480 FVQHRLPTKIVDIAIPCNTKSSHSIG 557
FV P K++DI +PCN K SIG
Sbjct: 147 FVNTESPLKLIDIGVPCNNKGERSIG 172
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 30.7 bits (66), Expect = 0.82
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 289 GQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITE 450
G L+ A H G+F GA +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 502
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 502
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 502
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 2.5
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +2
Query: 350 SHQVL-LLTRFKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 502
SH+V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 261 CVRHLITALRSACCTEVCRAHR-CYAYCG 344
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 261 CVRHLITALRSACCTEVCRAHR-CYAYCG 344
C R T R+ CCT C R C CG
Sbjct: 94 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 261 CVRHLITALRSACCTEVCRAHR-CYAYCG 344
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 261 CVRHLITALRSACCTEVCRAHR-CYAYCG 344
C R T R+ CCT C R C CG
Sbjct: 95 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 261 CVRHLITALRSACCTEVCRAHR-CYAYCG 344
C R T R+ CCT C R C CG
Sbjct: 96 CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 242 AIENPLMCSSSHHGPSVSVLY*SLPRTPVLRLLRGVSHQVLLLTRFKLHSVNLVS*LYWT 421
+I+ L S+HH V +L S P L++ + + + + R K H +N S Y T
Sbjct: 91 SIQELLHDISAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYIT 150
Query: 422 LHKTI 436
L T+
Sbjct: 151 LVSTV 155
>AC024810-18|ABC71796.1| 787|Caenorhabditis elegans Abnormal cell
migration protein 30 protein.
Length = 787
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 RLVVTQISATMSGGLDVLALNEED-VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVI 190
R+V T+ +L ++ D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
Query: 191 NLRRTWEKLVLAARAVVAIENPL 259
T +V + +A+ L
Sbjct: 204 EDSATILNIVDEMKKTLAVVEEL 226
>AB212859-1|BAE66674.1| 787|Caenorhabditis elegans COGC-1 protein.
Length = 787
Score = 27.9 bits (59), Expect = 5.8
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 14 RLVVTQISATMSGGLDVLALNEED-VTKMLAATTHLGAENVNFQMETYVYKRRADGTHVI 190
R+V T+ +L ++ D T LAA L ++++ +E Y+ KR TH+I
Sbjct: 144 RIVATRSELEFQNCSTLLDISRSDWATNQLAAIALLQGKDISQLLELYLEKRFEHVTHLI 203
Query: 191 NLRRTWEKLVLAARAVVAIENPL 259
T +V + +A+ L
Sbjct: 204 EDSATILNIVDEMKKTLAVVEEL 226
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,236,785
Number of Sequences: 27780
Number of extensions: 354458
Number of successful extensions: 888
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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