Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30007
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.       33   0.85 
AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.     33   0.85 
U29895-1|AAC73008.1|  393|Homo sapiens 4-hydroxyphenylpyruvate-d...    30   6.0  

>BC054003-1|AAH54003.1| 1192|Homo sapiens RNASEN protein protein.
          Length = 1192

 Score = 33.1 bits (72), Expect = 0.85
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 302 QYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPP 457
           QY+Y  P      F+ +   N   P+ + +P  PPMP + +  +      PP
Sbjct: 50  QYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPP 101


>AF189011-1|AAF80558.1| 1374|Homo sapiens ribonuclease III protein.
          Length = 1374

 Score = 33.1 bits (72), Expect = 0.85
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 302 QYEYSAPDGTPVKFTYTADENGYQPQSELLPVAPPMPEAIRRAIDYILAHPP 457
           QY+Y  P      F+ +   N   P+ + +P  PPMP + +  +      PP
Sbjct: 50  QYQYEPPSAPSTTFSNSPAPNFLPPRPDFVPFPPPMPPSAQGPLPPCPIRPP 101


>U29895-1|AAC73008.1|  393|Homo sapiens
           4-hydroxyphenylpyruvate-dioxygenase protein.
          Length = 393

 Score = 30.3 bits (65), Expect = 6.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 365 GYQPQSELLPVAPPMPEAIRRAIDYILAHPPKTETV 472
           GY+P + + P+ P +P+     ID+I+ + P  E V
Sbjct: 159 GYEPPAFMDPLLPKLPKCSLEMIDHIVGNQPDQEMV 194


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,896,258
Number of Sequences: 237096
Number of extensions: 1580570
Number of successful extensions: 3258
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3256
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)