Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30004
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p pro...   101   4e-22
AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p pro...   101   4e-22
AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA ...   101   4e-22
DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    30   1.7  
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    29   2.9  

>AY071732-1|AAL49354.1|  157|Drosophila melanogaster RH44960p
           protein.
          Length = 157

 Score =  101 bits (243), Expect = 4e-22
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +3

Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
           K CVYVY+A+ +  +P  P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGHRI
Sbjct: 90  KRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRI 148

Query: 435 RVMLYPSRI 461
           R+MLYPSRI
Sbjct: 149 RIMLYPSRI 157



 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +1

Query: 124 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY G
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVG 89


>AY071136-1|AAL48758.1|  157|Drosophila melanogaster RE17737p
           protein.
          Length = 157

 Score =  101 bits (243), Expect = 4e-22
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +3

Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
           K CVYVY+A+ +  +P  P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGHRI
Sbjct: 90  KRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRI 148

Query: 435 RVMLYPSRI 461
           R+MLYPSRI
Sbjct: 149 RIMLYPSRI 157



 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +1

Query: 124 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY G
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVG 89


>AE014297-251|AAF52027.1|  157|Drosophila melanogaster CG2099-PA
           protein.
          Length = 157

 Score =  101 bits (243), Expect = 4e-22
 Identities = 44/69 (63%), Positives = 56/69 (81%)
 Frame = +3

Query: 255 KHCVYVYRAKKRTPIPGGPRGKKTKLRAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRI 434
           K CVYVY+A+ +  +P  P  +KT++RA+WGKVTR HGN+G+VRA+F  NLP  AMGHRI
Sbjct: 90  KRCVYVYKAETKKCVPQHPE-RKTRVRAVWGKVTRIHGNTGAVRARFNRNLPGHAMGHRI 148

Query: 435 RVMLYPSRI 461
           R+MLYPSRI
Sbjct: 149 RIMLYPSRI 157



 Score = 75.4 bits (177), Expect = 4e-14
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +1

Query: 124 RHGRLYAKAVFTGYKRGLRNQHENTALLKVEGAKDRNDAVFYAG 255
           RHGRL+AKAVFTGYKRGLRNQHEN A+LK+EGA+ +    FY G
Sbjct: 46  RHGRLFAKAVFTGYKRGLRNQHENQAILKIEGARRKEHGSFYVG 89


>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 74   QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 199
            + +  SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 954  EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTHTP 995


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
           protein.
          Length = 1504

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 74  QQLLWSPQRSFAKHQSPATAGCTQRPYSQDISVVYATSTRTP 199
           + +  SP+   +   +PAT+     P S  +S+  +TST TP
Sbjct: 405 EAMCMSPEHRSSSQPTPATSSAGSIPSSVSVSISVSTSTPTP 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,428,777
Number of Sequences: 53049
Number of extensions: 495870
Number of successful extensions: 1292
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)