Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30003
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor ...   171   3e-42
X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.   171   3e-42
M19997-1|AAA50388.1|  358|Homo sapiens elongation factor 2 protein.   171   3e-42
BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.        171   3e-42
BC024689-1|AAH24689.1|  517|Homo sapiens Similar to Elongation f...   171   3e-42
AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2 pro...   171   3e-42
D21163-1|BAA04699.2|  977|Homo sapiens KIAA0031 protein.               99   2e-20
CR456774-1|CAG33055.1|  972|Homo sapiens U5-116KD protein.             99   2e-20
BC002360-1|AAH02360.1|  972|Homo sapiens elongation factor Tu GT...    99   2e-20
AJ505017-1|CAD43720.1|  850|Homo sapiens small nuclear ribonucle...    99   2e-20
AK023181-1|BAB14450.1|  857|Homo sapiens protein ( Homo sapiens ...    88   3e-17
BC049210-1|AAH49210.1|  751|Homo sapiens G elongation factor, mi...    38   0.045
AF367998-1|AAK53402.1|  751|Homo sapiens elongation factor G1 pr...    38   0.045
AF309777-1|AAK58877.1|  751|Homo sapiens elongation factor G pro...    38   0.045
Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.    31   3.9  
U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.        31   3.9  
BC034019-1|AAH34019.1|  373|Homo sapiens LIM domain binding 2 pr...    30   6.8  
AF068651-1|AAC77817.1|  373|Homo sapiens LIM-domain binding fact...    30   6.8  
AF064493-1|AAC28343.1|  331|Homo sapiens LIM homeobox protein co...    30   6.8  
AF064492-1|AAC28342.1|  373|Homo sapiens LIM homeobox protein co...    30   6.8  
AF052389-1|AAC13274.1|  347|Homo sapiens LIM domain binding prot...    30   6.8  
AF047337-1|AAC83552.1|  373|Homo sapiens LIM homeobox protein co...    30   6.8  

>Z11692-1|CAA77750.1|  858|Homo sapiens human  elongation factor 2
            protein.
          Length = 858

 Score =  171 bits (415), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +EIQCPE  VGGIYGVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGG
Sbjct: 747  VEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 806

Query: 331  QAFPQCVFDHWQVLPGDPCEPQSKP 257
            QAFPQCVFDHWQ+LPGDP +  S+P
Sbjct: 807  QAFPQCVFDHWQILPGDPFDNSSRP 831



 Score =  110 bits (264), Expect = 5e-24
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 511
           KEG + EEN+RGVRF+++DVTLH DAIHRGGGQIIPT RRCLYA +LTAQPRLMEP+YL
Sbjct: 688 KEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYL 746



 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 290 PWRPVRTSEQALNVVQETRKRKGLKEGLP 204
           P  P   S +   VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849


>X51466-1|CAA35829.1|  858|Homo sapiens elongation factor 2 protein.
          Length = 858

 Score =  171 bits (415), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +EIQCPE  VGGIYGVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGG
Sbjct: 747  VEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 806

Query: 331  QAFPQCVFDHWQVLPGDPCEPQSKP 257
            QAFPQCVFDHWQ+LPGDP +  S+P
Sbjct: 807  QAFPQCVFDHWQILPGDPFDNSSRP 831



 Score =  110 bits (264), Expect = 5e-24
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 511
           KEG + EEN+RGVRF+++DVTLH DAIHRGGGQIIPT RRCLYA +LTAQPRLMEP+YL
Sbjct: 688 KEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYL 746



 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 290 PWRPVRTSEQALNVVQETRKRKGLKEGLP 204
           P  P   S +   VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849


>M19997-1|AAA50388.1|  358|Homo sapiens elongation factor 2 protein.
          Length = 358

 Score =  171 bits (415), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -2

Query: 511 LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
           +EIQCPE  VGGIYGVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGG
Sbjct: 247 VEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 306

Query: 331 QAFPQCVFDHWQVLPGDPCEPQSKP 257
           QAFPQCVFDHWQ+LPGDP +  S+P
Sbjct: 307 QAFPQCVFDHWQILPGDPFDNSSRP 331



 Score =  110 bits (264), Expect = 5e-24
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 511
           KEG + EEN+RGVRF+++DVTLH DAIHRGGGQIIPT RRCLYA +LTAQPRLMEP+YL
Sbjct: 188 KEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYL 246



 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 290 PWRPVRTSEQALNVVQETRKRKGLKEGLP 204
           P  P   S +   VV ETRKRKGLKEG+P
Sbjct: 321 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 349


>BC126259-1|AAI26260.1|  858|Homo sapiens EEF2 protein protein.
          Length = 858

 Score =  171 bits (415), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +EIQCPE  VGGIYGVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGG
Sbjct: 747  VEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 806

Query: 331  QAFPQCVFDHWQVLPGDPCEPQSKP 257
            QAFPQCVFDHWQ+LPGDP +  S+P
Sbjct: 807  QAFPQCVFDHWQILPGDPFDNSSRP 831



 Score =  110 bits (264), Expect = 5e-24
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 511
           KEG + EEN+RGVRF+++DVTLH DAIHRGGGQIIPT RRCLYA +LTAQPRLMEP+YL
Sbjct: 688 KEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYL 746



 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 290 PWRPVRTSEQALNVVQETRKRKGLKEGLP 204
           P  P   S +   VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849


>BC024689-1|AAH24689.1|  517|Homo sapiens Similar to Elongation
           factor 2b protein.
          Length = 517

 Score =  171 bits (415), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -2

Query: 511 LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
           +EIQCPE  VGGIYGVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGG
Sbjct: 406 VEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 465

Query: 331 QAFPQCVFDHWQVLPGDPCEPQSKP 257
           QAFPQCVFDHWQ+LPGDP +  S+P
Sbjct: 466 QAFPQCVFDHWQILPGDPFDNSSRP 490



 Score =  110 bits (264), Expect = 5e-24
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 511
           KEG + EEN+RGVRF+++DVTLH DAIHRGGGQIIPT RRCLYA +LTAQPRLMEP+YL
Sbjct: 347 KEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYL 405



 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 290 PWRPVRTSEQALNVVQETRKRKGLKEGLP 204
           P  P   S +   VV ETRKRKGLKEG+P
Sbjct: 480 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 508


>AY942181-1|AAX34409.1|  858|Homo sapiens elongation factor 2 protein.
          Length = 858

 Score =  171 bits (415), Expect = 3e-42
 Identities = 74/85 (87%), Positives = 80/85 (94%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +EIQCPE  VGGIYGVLNR+RGHVFEESQVAGTPMF+VKAYLPVNESFGFTADLRSNTGG
Sbjct: 747  VEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTADLRSNTGG 806

Query: 331  QAFPQCVFDHWQVLPGDPCEPQSKP 257
            QAFPQCVFDHWQ+LPGDP +  S+P
Sbjct: 807  QAFPQCVFDHWQILPGDPFDNSSRP 831



 Score =  110 bits (264), Expect = 5e-24
 Identities = 47/59 (79%), Positives = 54/59 (91%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVYL 511
           KEG + EEN+RGVRF+++DVTLH DAIHRGGGQIIPT RRCLYA +LTAQPRLMEP+YL
Sbjct: 688 KEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYASVLTAQPRLMEPIYL 746



 Score = 36.7 bits (81), Expect = 0.079
 Identities = 17/29 (58%), Positives = 19/29 (65%)
 Frame = -1

Query: 290 PWRPVRTSEQALNVVQETRKRKGLKEGLP 204
           P  P   S +   VV ETRKRKGLKEG+P
Sbjct: 821 PGDPFDNSSRPSQVVAETRKRKGLKEGIP 849


>D21163-1|BAA04699.2|  977|Homo sapiens KIAA0031 protein.
          Length = 977

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +E+Q P   V  +Y VL RRRGHV +++ + G+P++ +KA++P  +SFGF  DLR++T G
Sbjct: 839  VEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQG 898

Query: 331  QAFPQCVFDHWQVLPGDPCE 272
            QAF   VF HWQ++PGDP +
Sbjct: 899  QAFSLSVFHHWQIVPGDPLD 918



 Score = 70.5 bits (165), Expect = 5e-12
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 514
           +EG + +E +R V+F I D  +  + +HRGGGQIIPT RR +Y+  L A PRLMEP Y
Sbjct: 780 REGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYY 837


>CR456774-1|CAG33055.1|  972|Homo sapiens U5-116KD protein.
          Length = 972

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +E+Q P   V  +Y VL RRRGHV +++ + G+P++ +KA++P  +SFGF  DLR++T G
Sbjct: 834  VEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQG 893

Query: 331  QAFPQCVFDHWQVLPGDPCE 272
            QAF   VF HWQ++PGDP +
Sbjct: 894  QAFSLSVFHHWQIVPGDPLD 913



 Score = 70.5 bits (165), Expect = 5e-12
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 514
           +EG + +E +R V+F I D  +  + +HRGGGQIIPT RR +Y+  L A PRLMEP Y
Sbjct: 775 REGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYY 832


>BC002360-1|AAH02360.1|  972|Homo sapiens elongation factor Tu GTP
            binding domain containing 2 protein.
          Length = 972

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -2

Query: 511  LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
            +E+Q P   V  +Y VL RRRGHV +++ + G+P++ +KA++P  +SFGF  DLR++T G
Sbjct: 834  VEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQG 893

Query: 331  QAFPQCVFDHWQVLPGDPCE 272
            QAF   VF HWQ++PGDP +
Sbjct: 894  QAFSLSVFHHWQIVPGDPLD 913



 Score = 70.5 bits (165), Expect = 5e-12
 Identities = 30/58 (51%), Positives = 40/58 (68%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 514
           +EG + +E +R V+F I D  +  + +HRGGGQIIPT RR +Y+  L A PRLMEP Y
Sbjct: 775 REGPLCDELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYY 832


>AJ505017-1|CAD43720.1|  850|Homo sapiens small nuclear
           ribonucleoprotein component protein.
          Length = 850

 Score = 98.7 bits (235), Expect = 2e-20
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -2

Query: 511 LEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNTGG 332
           +E+Q P   V  +Y VL RRRGHV +++ + G+P++ +KA++P  +SFGF  DLR++T G
Sbjct: 712 VEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQG 771

Query: 331 QAFPQCVFDHWQVLPGDPCE 272
           QAF   VF HWQ++PGDP +
Sbjct: 772 QAFSLSVFHHWQIVPGDPLD 791



 Score = 69.3 bits (162), Expect = 1e-11
 Identities = 30/58 (51%), Positives = 39/58 (67%)
 Frame = -3

Query: 687 KEGVMAEENLRGVRFNIYDVTLHTDAIHRGGGQIIPTTRRCLYACLLTAQPRLMEPVY 514
           +EG + +E +R V+F I D  +    +HRGGGQIIPT RR +Y+  L A PRLMEP Y
Sbjct: 653 REGPLCDELIRNVKFKILDAVVAQKPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYY 710


>AK023181-1|BAB14450.1|  857|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13119 fis, clone NT2RP3002671, weakly similar to
           ELONGATION FACTOR 2. ).
          Length = 857

 Score = 87.8 bits (208), Expect = 3e-17
 Identities = 38/82 (46%), Positives = 51/82 (62%)
 Frame = -2

Query: 523 ACISLEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRS 344
           A  + +I      +G +Y VL++R G V +E    GT MFI+KA LPV ESFGF  ++R 
Sbjct: 720 AMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTDMFIIKAVLPVAESFGFADEIRK 779

Query: 343 NTGGQAFPQCVFDHWQVLPGDP 278
            T G A PQ VF HW+++P DP
Sbjct: 780 RTSGLASPQLVFSHWEIIPSDP 801


>BC049210-1|AAH49210.1|  751|Homo sapiens G elongation factor,
           mitochondrial 1 protein.
          Length = 751

 Score = 37.5 bits (83), Expect = 0.045
 Identities = 23/86 (26%), Positives = 43/86 (50%)
 Frame = -2

Query: 517 ISLEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNT 338
           +++E+  P    G +   +NRR G +  +  V     F + A +P+N+ FG++ +LRS T
Sbjct: 650 MAVEVVAPNEFQGQVIAGINRRHGVITGQDGVED--YFTLYADVPLNDMFGYSTELRSCT 707

Query: 337 GGQAFPQCVFDHWQVLPGDPCEPQSK 260
            G+      +  +Q     PC P ++
Sbjct: 708 EGKGEYTMEYSRYQ-----PCLPSTQ 728


>AF367998-1|AAK53402.1|  751|Homo sapiens elongation factor G1
           protein.
          Length = 751

 Score = 37.5 bits (83), Expect = 0.045
 Identities = 23/86 (26%), Positives = 43/86 (50%)
 Frame = -2

Query: 517 ISLEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNT 338
           +++E+  P    G +   +NRR G +  +  V     F + A +P+N+ FG++ +LRS T
Sbjct: 650 MAVEVVAPNEFQGQVIAGINRRHGVITGQDGVED--YFTLYADVPLNDMFGYSTELRSCT 707

Query: 337 GGQAFPQCVFDHWQVLPGDPCEPQSK 260
            G+      +  +Q     PC P ++
Sbjct: 708 EGKGEYTMEYSRYQ-----PCLPSTQ 728


>AF309777-1|AAK58877.1|  751|Homo sapiens elongation factor G
           protein.
          Length = 751

 Score = 37.5 bits (83), Expect = 0.045
 Identities = 23/86 (26%), Positives = 43/86 (50%)
 Frame = -2

Query: 517 ISLEIQCPEVAVGGIYGVLNRRRGHVFEESQVAGTPMFIVKAYLPVNESFGFTADLRSNT 338
           +++E+  P    G +   +NRR G +  +  V     F + A +P+N+ FG++ +LRS T
Sbjct: 650 MAVEVVAPNEFQGQVIAGINRRHGVITGQDGVED--YFTLYADVPLNDMFGYSTELRSCT 707

Query: 337 GGQAFPQCVFDHWQVLPGDPCEPQSK 260
            G+      +  +Q     PC P ++
Sbjct: 708 EGKGEYTMEYSRYQ-----PCLPSTQ 728


>Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.
          Length = 2214

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -3

Query: 378 MSRSVLLPICVPTPADRPSRSAYST-----IGRSSLETRANLRASPKRCTGNEKEERIEG 214
           MS  + L +CVP P    S  +YS      +G +   TR   + S   C+G + E R+EG
Sbjct: 690 MSEDLSLEVCVPDPEF--SGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVEARLEG 747


>U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.
          Length = 2214

 Score = 31.1 bits (67), Expect = 3.9
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = -3

Query: 378 MSRSVLLPICVPTPADRPSRSAYST-----IGRSSLETRANLRASPKRCTGNEKEERIEG 214
           MS  + L +CVP P    S  +YS      +G +   TR   + S   C+G + E R+EG
Sbjct: 690 MSEDLSLEVCVPDPEF--SGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVEARLEG 747


>BC034019-1|AAH34019.1|  373|Homo sapiens LIM domain binding 2
           protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 316 CVFDHWQVLPGDPCEPQSKP*TLYRKRE 233
           C+F  WQ +   P EP  +P T  RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261


>AF068651-1|AAC77817.1|  373|Homo sapiens LIM-domain binding factor
           CLIM1 protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 316 CVFDHWQVLPGDPCEPQSKP*TLYRKRE 233
           C+F  WQ +   P EP  +P T  RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261


>AF064493-1|AAC28343.1|  331|Homo sapiens LIM homeobox protein
           cofactor protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 316 CVFDHWQVLPGDPCEPQSKP*TLYRKRE 233
           C+F  WQ +   P EP  +P T  RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261


>AF064492-1|AAC28342.1|  373|Homo sapiens LIM homeobox protein
           cofactor protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 316 CVFDHWQVLPGDPCEPQSKP*TLYRKRE 233
           C+F  WQ +   P EP  +P T  RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261


>AF052389-1|AAC13274.1|  347|Homo sapiens LIM domain binding protein
           protein.
          Length = 347

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 316 CVFDHWQVLPGDPCEPQSKP*TLYRKRE 233
           C+F  WQ +   P EP  +P T  RKR+
Sbjct: 210 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 237


>AF047337-1|AAC83552.1|  373|Homo sapiens LIM homeobox protein
           cofactor protein.
          Length = 373

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 316 CVFDHWQVLPGDPCEPQSKP*TLYRKRE 233
           C+F  WQ +   P EP  +P T  RKR+
Sbjct: 234 CLFQKWQRMVAPPAEPTRQPTTKRRKRK 261


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,348,871
Number of Sequences: 237096
Number of extensions: 2354224
Number of successful extensions: 8948
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 8665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8948
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)