Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30002
(630 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 187 6e-48
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 186 8e-48
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 186 8e-48
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 185 2e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 185 2e-47
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 185 2e-47
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 185 2e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 184 4e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 184 4e-47
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 7e-42
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 6e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 152 2e-37
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 101 5e-22
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 91 4e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 78 4e-15
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 63 2e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 3e-09
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 55 4e-08
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 47 9e-06
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.089
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.1
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 30 1.5
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 1.8
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 29 2.5
At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit, ... 28 4.4
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.9
At1g28630.1 68414.m03526 expressed protein ; expression supporte... 28 5.9
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 27 7.8
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 27 7.8
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.8
At1g66880.1 68414.m07601 serine/threonine protein kinase family ... 27 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 187 bits (455), Expect = 6e-48
Identities = 96/125 (76%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFNTPAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (454), Expect = 8e-48
Identities = 96/125 (76%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFNTPAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (454), Expect = 8e-48
Identities = 96/125 (76%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFNTPAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 185 bits (450), Expect = 2e-47
Identities = 95/125 (76%), Positives = 98/125 (78%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN PAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 185 bits (450), Expect = 2e-47
Identities = 93/125 (74%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 185 bits (450), Expect = 2e-47
Identities = 93/125 (74%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 185 bits (450), Expect = 2e-47
Identities = 93/125 (74%), Positives = 99/125 (79%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN+PAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGFSLPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 92.3 bits (219), Expect = 2e-19
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YV
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYV 56
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 94/125 (75%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN PAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 94/125 (75%), Positives = 97/125 (77%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKAN
Sbjct: 58 DEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKAN 117
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFETFN PAMYVAIQAV S + + VS T P PHA
Sbjct: 118 REKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 176
Query: 614 ILRLD 628
ILRLD
Sbjct: 177 ILRLD 181
Score = 96.7 bits (230), Expect = 1e-20
Identities = 43/52 (82%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYV 56
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (405), Expect = 7e-42
Identities = 82/125 (65%), Positives = 95/125 (76%), Gaps = 1/125 (0%)
Frame = +2
Query: 257 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 436
DEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK N
Sbjct: 59 DEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVN 118
Query: 437 REKMTQIMFETFNTPAMYVAIQAV-SRCTRPVVPPVSCWTPATVSPTPCPSTRDTHCPHA 613
REKMTQIMFE+F P+MY+ IQAV S + + + VS T P PHA
Sbjct: 119 REKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALPHA 177
Query: 614 ILRLD 628
ILRLD
Sbjct: 178 ILRLD 182
Score = 91.1 bits (216), Expect = 6e-19
Identities = 39/52 (75%), Positives = 47/52 (90%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++V
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFV 57
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (381), Expect = 6e-39
Identities = 75/128 (58%), Positives = 90/128 (70%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
L D+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 425 PKANREKMTQIMFETFNTPAMYVAIQAVSRCTRPVVPPVSCWTPATVSPTPCPSTRDTHC 604
PKA+REKMTQIMFETF P+MY+ +QA + P +
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSAL 128
Query: 605 PHAILRLD 628
PHAILRLD
Sbjct: 129 PHAILRLD 136
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 152 bits (369), Expect = 2e-37
Identities = 82/138 (59%), Positives = 93/138 (67%), Gaps = 1/138 (0%)
Frame = +2
Query: 218 RDGRYGTEGLLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 397
RDG E + +E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYV-GEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 398 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVSRC-TRPVVPPVSCWTPATVSPT 574
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+V + V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 575 PCPSTRDTHCPHAILRLD 628
P PH ILRLD
Sbjct: 154 -VPVYEGYALPHGILRLD 170
Score = 54.0 bits (124), Expect = 8e-08
Identities = 25/47 (53%), Positives = 32/47 (68%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYV 254
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYV
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYV 45
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 101 bits (241), Expect = 5e-22
Identities = 40/75 (53%), Positives = 54/75 (72%)
Frame = +2
Query: 284 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 463
L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREKM + MF
Sbjct: 66 LDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMIETMF 125
Query: 464 ETFNTPAMYVAIQAV 508
E +N +++ IQAV
Sbjct: 126 EKYNFAGVFIQIQAV 140
Score = 50.8 bits (116), Expect = 7e-07
Identities = 19/33 (57%), Positives = 27/33 (81%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEGYALP 606
++LYA G TG+V+DSGDGV+H VP+ +GY+ P
Sbjct: 141 LTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFP 173
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYV-----EMRHR 269
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD V E+RH+
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQ 65
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 91.5 bits (217), Expect = 4e-19
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 DEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP 427
DEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P
Sbjct: 72 DEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTP 131
Query: 428 KANREKMTQIMFETFNTPAMYVAIQAV 508
+RE +I+FETFN P +Y+A+ +V
Sbjct: 132 PESREYTGEILFETFNVPGLYIAVNSV 158
Score = 37.1 bits (82), Expect = 0.010
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +1
Query: 535 TGIVLDSGDGVSHTVPIYEGYAL 603
TG+V+D GDG +H VP+ EGY +
Sbjct: 173 TGVVVDVGDGATHVVPVAEGYVI 195
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 197
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 78.2 bits (184), Expect = 4e-15
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 451
+R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 452 QIMFETFNTPAMYVA 496
++MFE + PA+++A
Sbjct: 145 ELMFEKYKVPALFMA 159
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 33.1 bits (72), Expect = 0.16
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 517 YASGRTTGIVLDSGDGVSHTVPIYEGYAL 603
+A+GR T +V+D G G + P+++GY L
Sbjct: 167 FATGRATSLVVDCGGGSTTISPVHDGYVL 195
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.9 bits (146), Expect = 2e-10
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 272 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 445
+R + + P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 79 RRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 200
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 58.8 bits (136), Expect = 3e-09
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 475
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 476 TPAMYVAIQAV 508
Y + QAV
Sbjct: 117 VSGFYASEQAV 127
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 111 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 203
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 54.8 bits (126), Expect = 4e-08
Identities = 24/69 (34%), Positives = 41/69 (59%)
Frame = +2
Query: 290 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 469
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 470 FNTPAMYVA 496
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 206
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 47.2 bits (107), Expect = 9e-06
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 299 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 475
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 476 TPAMYVAIQA 505
PA+ + A
Sbjct: 145 VPAVAFGVDA 154
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 215
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.089
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 235 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 98
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 425 PKANREK 445
REK
Sbjct: 221 VFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 1.1
Identities = 22/67 (32%), Positives = 29/67 (43%)
Frame = +2
Query: 245 LLCRDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 424
LL D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 165 LLQPDAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYN 220
Query: 425 PKANREK 445
REK
Sbjct: 221 VFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.9 bits (64), Expect = 1.5
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Frame = +1
Query: 412 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRVSLY 519
GSP+ +G + E+D D + NI+H + +H + LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 1.8
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 211 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 125
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 1.8
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 400 DGVFLGGDTQLIVEGMMPNLLHVIPVS 320
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At1g14380.1 68414.m01704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 664
Score = 29.1 bits (62), Expect = 2.5
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 421 QPQGQQREDDPDHVRNIQHARHVRRHPSRVSLYASGRTTGIVLDSGDG 564
QP+G+ E+ + NI+ A + V + + G+ +G VL+ G+G
Sbjct: 374 QPEGKVSENVLEGGDNIEFAEKEKDTTDSVQIESEGKVSGNVLEGGEG 421
>At2g21770.1 68415.m02588 cellulose synthase, catalytic subunit,
putative similar to gi:2827141 cellulose synthase
catalytic subunit, Arabidopsis thaliana (Ath-A)
Length = 1088
Score = 28.3 bits (60), Expect = 4.4
Identities = 22/78 (28%), Positives = 32/78 (41%)
Frame = +1
Query: 373 ACRPRGTPRPAY*GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRVSLYASGRTTGIVLD 552
AC GT GSP+ +G + +DD D + + + H + +LY TG
Sbjct: 80 ACPQCGTRYKRIKGSPRVEGDEEDDDIDDLEHEFYGMD-PEHVTEAALYYMRLNTG---R 135
Query: 553 SGDGVSHTVPIYEGYALP 606
D VSH G +P
Sbjct: 136 GTDEVSHLYSASPGSEVP 153
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -1
Query: 345 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 256
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At1g28630.1 68414.m03526 expressed protein ; expression supported
by MPSS
Length = 321
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -2
Query: 563 PSPESSTIPVVRPDAYSETRL 501
P PESSTIP + PD + +L
Sbjct: 64 PCPESSTIPQISPDMQQQQQL 84
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEG 594
++LYA+ RT+GIV++ G V +PI G
Sbjct: 242 LALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 508 VSLYASGRTTGIVLDSGDGVSHTVPIYEG 594
++LYA+ RT+GIV++ G V +PI G
Sbjct: 242 LALYAARRTSGIVVNIGFQVITILPILHG 270
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -3
Query: 211 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 89
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At1g66880.1 68414.m07601 serine/threonine protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 1296
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +2
Query: 518 TRPVVPPVSCWTPATVSPTPCPSTRDTHCPHAILRL 625
T PV S P T P P P R HC H +L L
Sbjct: 208 TLPVGGKCSPLNPTT-QPPPQPGDRHKHCGHPLLEL 242
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,636,382
Number of Sequences: 28952
Number of extensions: 368396
Number of successful extensions: 1260
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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