Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30001
         (719 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    24   1.4  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    23   1.9  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.9  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    23   1.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   2.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    23   2.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.4  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   4.4  
AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   4.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.4  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   7.6  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 375  KNMLYNFKYLIWISKTYTTGE 313
            KN+  N KY  W++   T GE
Sbjct: 1270 KNLDSNLKYEFWVTAATTIGE 1290


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 667 PSLDHHPNNWLQQTPGL 717
           PSL      WL++TPGL
Sbjct: 20  PSLTDLVQRWLERTPGL 36


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 667 PSLDHHPNNWLQQTPGL 717
           PSL      WL++TPGL
Sbjct: 180 PSLTDLVQRWLERTPGL 196



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 154 YLQIVKSFDKE*VLLLHNPIVISQLGRLHLHQNYN 258
           YL+    F      LL N + + Q  R+  +QNY+
Sbjct: 126 YLRPASGFQSLQFRLLENKLGVRQENRVKYNQNYS 160


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 667 PSLDHHPNNWLQQTPGL 717
           PSL      WL++TPGL
Sbjct: 180 PSLTDLVQRWLERTPGL 196



 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 154 YLQIVKSFDKE*VLLLHNPIVISQLGRLHLHQNYN 258
           YL+    F      LL N + + Q  R+  +QNY+
Sbjct: 126 YLRPASGFQSLQFRLLENKLGVRQENRVKYNQNYS 160


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = -2

Query: 574 PQIREIGLQNYLRRMQIPDPKNN*IYSG 491
           P    +GL  Y R   + DP N  +Y+G
Sbjct: 254 PSKINLGLGTYGRGFALADPTNTSLYAG 281


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 643 PIGLIIGHPSLDHHP 687
           P GLI  HP L  HP
Sbjct: 226 PTGLIPPHPGLSPHP 240


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +1

Query: 643 PIGLIIGHPSLDHHP 687
           P GLI  HP L  HP
Sbjct: 118 PTGLIPPHPGLSPHP 132


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = +2

Query: 359 LYSIFFL*AFSSSVCSDANNGTLIAAGM 442
           ++ +F+L   +S +C++AN   ++  G+
Sbjct: 203 VFDLFYLSKRASDLCNEANKTKILLVGL 230


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 12/47 (25%), Positives = 19/47 (40%)
 Frame = -1

Query: 416 YLHHYRLNLRKLIGKICYTTLNTLFGSVKLTLLESHQKCFLQIKKRS 276
           Y HH   +LR   G   +      +  V  ++L SH K    + + S
Sbjct: 242 YKHHLEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYRYS 288


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -2

Query: 295 CKSRREVFSKRSNCSFDVDVTDQAD 221
           C S +    + S+C  D+DVT+  D
Sbjct: 196 CSSAKRPKFENSSCDEDIDVTNIDD 220


>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = +1

Query: 154 YLQIVKSFDKE*VLLLHNPIVISQLGRLHLHQNYN 258
           YL+    F      LL N + + Q  R+  +QNY+
Sbjct: 66  YLRPASGFQSLQFRLLENKLGVRQENRVKYNQNYS 100



 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 667 PSLDHHPNNWLQQTPG 714
           PSL      WL++TPG
Sbjct: 120 PSLTDLVQRWLERTPG 135


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = -3

Query: 372 NMLYNFKYLIWISKTY--TTGESSEVLF 295
           N LY+   L+WI+ T+    G+S  V++
Sbjct: 248 NSLYSLHLLLWITVTFILLVGDSYIVMY 275


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 378 RKNMLYNFKYLIWISKTYTTGESSEVL 298
           R  ML +F Y + ++   TT  S EVL
Sbjct: 239 RGTMLSHFAYYVDMANMLTTPLSEEVL 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,494
Number of Sequences: 336
Number of extensions: 3577
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)