Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30001
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009771-1|AAH09771.1| 314|Homo sapiens BRCA2 and CDKN1A intera... 57 7e-08
AY064249-1|AAL55440.1| 314|Homo sapiens BRCA2 and Cip1/p21 inte... 55 3e-07
AY064247-2|AAL55438.1| 314|Homo sapiens BRCA2 and Cip1/p21 inte... 55 3e-07
AL360176-6|CAI12091.1| 314|Homo sapiens BRCA2 and CDKN1A intera... 55 3e-07
AB040451-1|BAA92928.1| 314|Homo sapiens TOK-1beta protein. 55 3e-07
AY064248-1|AAL55439.1| 322|Homo sapiens BRCA2 and Cip1/p21 inte... 54 7e-07
AY064247-1|AAL55436.1| 322|Homo sapiens BRCA2 and Cip1/p21 inte... 54 7e-07
AL360176-8|CAI12093.1| 322|Homo sapiens BRCA2 and CDKN1A intera... 54 7e-07
AL360176-7|CAI12092.1| 292|Homo sapiens BRCA2 and CDKN1A intera... 54 7e-07
AB040450-1|BAA92927.1| 322|Homo sapiens TOK-1alpha protein. 54 7e-07
AF103592-1|AAD16652.1| 111|Homo sapiens immunoglobulin lambda l... 30 9.6
>BC009771-1|AAH09771.1| 314|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 314
Score = 56.8 bits (131), Expect = 7e-08
Identities = 38/128 (29%), Positives = 67/128 (52%), Gaps = 14/128 (10%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTYTTGESSE------------VLFANQEEK 277
++ LQ EL AHR N Y + ISKT+ E + ++FAN EE+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTFVEAEKNNSKKKPSNKKKAALMFANAEEE 254
Query: 276 SLVSEAIV 253
+AI+
Sbjct: 255 FFYEKAIL 262
Score = 34.7 bits (76), Expect = 0.34
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 298 FCKSRREVFSKRSNCSFDVDVTDQADL---SQWDYEGGALTPCRKILLFEGIKFGYLIDL 128
F + E F +++ F+ V +++D +W ++ +TP R ++L G K ++D
Sbjct: 248 FANAEEEFFYEKAILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDK 307
Query: 127 MK 122
+K
Sbjct: 308 LK 309
>AY064249-1|AAL55440.1| 314|Homo sapiens BRCA2 and Cip1/p21
interacting protein, splice variant beta protein.
Length = 314
Score = 54.8 bits (126), Expect = 3e-07
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEK 277
++ LQ EL AHR N Y + ISKT+ + + + ++FAN EE+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEE 254
Query: 276 SLVSEAIV 253
+AI+
Sbjct: 255 FFYEKAIL 262
Score = 34.7 bits (76), Expect = 0.34
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 298 FCKSRREVFSKRSNCSFDVDVTDQADL---SQWDYEGGALTPCRKILLFEGIKFGYLIDL 128
F + E F +++ F+ V +++D +W ++ +TP R ++L G K ++D
Sbjct: 248 FANAEEEFFYEKAILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDK 307
Query: 127 MK 122
+K
Sbjct: 308 LK 309
>AY064247-2|AAL55438.1| 314|Homo sapiens BRCA2 and Cip1/p21
interacting protein protein.
Length = 314
Score = 54.8 bits (126), Expect = 3e-07
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEK 277
++ LQ EL AHR N Y + ISKT+ + + + ++FAN EE+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEE 254
Query: 276 SLVSEAIV 253
+AI+
Sbjct: 255 FFYEKAIL 262
Score = 34.7 bits (76), Expect = 0.34
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 298 FCKSRREVFSKRSNCSFDVDVTDQADL---SQWDYEGGALTPCRKILLFEGIKFGYLIDL 128
F + E F +++ F+ V +++D +W ++ +TP R ++L G K ++D
Sbjct: 248 FANAEEEFFYEKAILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDK 307
Query: 127 MK 122
+K
Sbjct: 308 LK 309
>AL360176-6|CAI12091.1| 314|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 314
Score = 54.8 bits (126), Expect = 3e-07
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEK 277
++ LQ EL AHR N Y + ISKT+ + + + ++FAN EE+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEE 254
Query: 276 SLVSEAIV 253
+AI+
Sbjct: 255 FFYEKAIL 262
Score = 34.7 bits (76), Expect = 0.34
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 298 FCKSRREVFSKRSNCSFDVDVTDQADL---SQWDYEGGALTPCRKILLFEGIKFGYLIDL 128
F + E F +++ F+ V +++D +W ++ +TP R ++L G K ++D
Sbjct: 248 FANAEEEFFYEKAILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDK 307
Query: 127 MK 122
+K
Sbjct: 308 LK 309
>AB040451-1|BAA92928.1| 314|Homo sapiens TOK-1beta protein.
Length = 314
Score = 54.8 bits (126), Expect = 3e-07
Identities = 37/128 (28%), Positives = 68/128 (53%), Gaps = 14/128 (10%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY------------TTGESSEVLFANQEEK 277
++ LQ EL AHR N Y + ISKT+ + + + ++FAN EE+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTFVEAGKNNSKKKPSNKKKAALMFANAEEE 254
Query: 276 SLVSEAIV 253
+AI+
Sbjct: 255 FFYEKAIL 262
Score = 34.7 bits (76), Expect = 0.34
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = -2
Query: 298 FCKSRREVFSKRSNCSFDVDVTDQADL---SQWDYEGGALTPCRKILLFEGIKFGYLIDL 128
F + E F +++ F+ V +++D +W ++ +TP R ++L G K ++D
Sbjct: 248 FANAEEEFFYEKAILKFNYSVQEESDTCLGGKWSFDDVPMTPLRTVMLIPGDKMNEIMDK 307
Query: 127 MK 122
+K
Sbjct: 308 LK 309
>AY064248-1|AAL55439.1| 322|Homo sapiens BRCA2 and Cip1/p21
interacting protein, splice variant alpha protein.
Length = 322
Score = 53.6 bits (123), Expect = 7e-07
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY 325
++ LQ EL AHR N Y + ISKT+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTF 226
>AY064247-1|AAL55436.1| 322|Homo sapiens BRCA2 and Cip1/p21
interacting protein protein.
Length = 322
Score = 53.6 bits (123), Expect = 7e-07
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY 325
++ LQ EL AHR N Y + ISKT+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTF 226
>AL360176-8|CAI12093.1| 322|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 322
Score = 53.6 bits (123), Expect = 7e-07
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY 325
++ LQ EL AHR N Y + ISKT+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTF 226
>AL360176-7|CAI12092.1| 292|Homo sapiens BRCA2 and CDKN1A
interacting protein protein.
Length = 292
Score = 53.6 bits (123), Expect = 7e-07
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY 325
++ LQ EL AHR N Y + ISKT+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTF 226
>AB040450-1|BAA92927.1| 322|Homo sapiens TOK-1alpha protein.
Length = 322
Score = 53.6 bits (123), Expect = 7e-07
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Frame = -3
Query: 594 KK*PQCGHRSEKLAYKTISGEC-RSQTQRIIKYILADDSQHTGLVINERILNIPAAISVP 418
+K QC + ++L + C +S +++ K+ L D ++ GL+++ER +N+P I++P
Sbjct: 136 RKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKF-LNDTTKPVGLLLSERFINVPPQIALP 194
Query: 417 LFASLQTELEKAHRKNMLYNFKYL-IWISKTY 325
++ LQ EL AHR N Y + ISKT+
Sbjct: 195 MYQQLQKELAGAHRTNKPCGKCYFYLLISKTF 226
>AF103592-1|AAD16652.1| 111|Homo sapiens immunoglobulin lambda
light chain variable region protein.
Length = 111
Score = 29.9 bits (64), Expect = 9.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 631 TPSLPIGLIIGHPSLDHHPNNWLQQTPG 714
T +L GL G S H+P+ W QQTPG
Sbjct: 11 TVTLTCGLSTGSVSTSHYPS-WYQQTPG 37
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,329,349
Number of Sequences: 237096
Number of extensions: 1899145
Number of successful extensions: 3928
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3928
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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