Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11055
(745 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 87 2e-18
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 47 3e-06
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 41 2e-04
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 36 0.008
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 34 0.019
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 34 0.019
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 34 0.025
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 32 0.075
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 31 0.13
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 31 0.17
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 31 0.23
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 30 0.30
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 30 0.40
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 29 0.92
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.92
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 28 1.6
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 2.1
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 27 2.1
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 27 2.8
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 26 6.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.5
SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit |Sch... 26 6.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 87.4 bits (207), Expect = 2e-18
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARG-MLPDPKNTPIVI 178
F+GL + K ++SDGL GLYRGFG SV GI++YR YFG YDT + +L P +
Sbjct: 175 FNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLA 234
Query: 179 SWAIAQTVTTVAGIISYPFDTVRRR 253
S+ + VTT +G+ SYP DT+RRR
Sbjct: 235 SFLLGWAVTTGSGVASYPLDTIRRR 259
Score = 52.0 bits (119), Expect = 9e-08
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +1
Query: 256 MMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 435
MM SG A + Y ++ C I EG +FFKGA +N+LRG GA VL +YD+++ ++
Sbjct: 261 MMTSGEA---VKYSSSFECGRQILAKEGARSFFKGAGANILRGVAGAGVLSIYDQVQLLM 317
Score = 30.3 bits (65), Expect = 0.30
Identities = 16/61 (26%), Positives = 25/61 (40%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVIS 181
+ G+G C + +G+I L+RG +V +A F F D + M K
Sbjct: 71 YKGIGECFKRTAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAK 130
Query: 182 W 184
W
Sbjct: 131 W 131
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 253 QMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 381
+M+++GR YK C+ A EG + ++G +NVLR
Sbjct: 60 EMIRAGRLSHR--YKGIGECFKRTAAEEGVISLWRGNTANVLR 100
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 46.8 bits (106), Expect = 3e-06
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML-PDPKNTPIVI 178
++G +C +KI K + ++ LY GF ++ +++ A YFG R L P +
Sbjct: 141 YNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGVIQKIRNSLTPASSRIGEIR 200
Query: 179 SWAIAQTVTTVAG-IISYPFDTVRRR 253
+ IA T+ + G +S PFD ++ R
Sbjct: 201 NNLIAGTIGGIFGTFLSTPFDVIKSR 226
Score = 33.5 bits (73), Expect = 0.033
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 319 TIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEI 423
T+A+ EG +A +KG VLR G GG +LV+++ +
Sbjct: 249 TVAREEGFTALYKGFVPKVLRLGPGGGILLVVFNSV 284
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRG 70
++G +C+ KI K++G LYRG
Sbjct: 45 YNGTFDCLKKIVKNEGPHRLYRG 67
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 41.1 bits (92), Expect = 2e-04
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +2
Query: 17 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQ 196
N IS + +S+GL G YRG+ + V + S++ Y+ ++ L N I + I
Sbjct: 121 NTISTLARSEGLKGFYRGYWMGVAIYLPTTVSWWVCYEESKKYLQKQSNWDISVIAPICS 180
Query: 197 TV-TTVAGIISYPFDTVRRR 253
+ T VA IS P D V+ R
Sbjct: 181 ALGTVVATTISTPLDIVKTR 200
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 35.5 bits (78), Expect = 0.008
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR-----GMLPDPKNT 166
+ +G S I + +G+ GL RG G + I GFY+ R L DPK
Sbjct: 67 YKSVGQAFSLIARHEGIRGLQRGLGTAYVYQICLNGCRLGFYEPIRRTLNTWFLDDPKGN 126
Query: 167 PIVISWAIAQTVTTVAGIISYPFDTVRRR 253
+ I+ A + PF V+ R
Sbjct: 127 KLAINVASGAGSGLCGALFGSPFFLVKTR 155
Score = 29.5 bits (63), Expect = 0.53
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 292 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFV-LVLYDEIKKVL 435
YK+ + ++ I K G F GA + +LR G+ V L +Y+ K+++
Sbjct: 171 YKHIFNAFSRIIKENGVKGLFVGADAAILRTVSGSSVQLPIYNWAKRMI 219
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 17 NCISKIFKSDGLIGLYRGFGVSVQGI 94
+CI K +S+G LY+GFG + I
Sbjct: 271 DCILKTIRSEGFFALYKGFGAHLARI 296
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 277 KSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 381
K+ LYKN I C ++EG A +KG +++ R
Sbjct: 261 KNKELYKNPIDCILKTIRSEGFFALYKGFGAHLAR 295
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 34.3 bits (75), Expect = 0.019
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 259 MQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKKVL 435
MQS A + YKN+IHC I +G F+ GA + R G V +Y+++ ++L
Sbjct: 231 MQSLSASKE--YKNSIHCAYKILTQDGLLRFWSGATPRLARLILSGGIVFTVYEKVMEIL 288
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 34.3 bits (75), Expect = 0.019
Identities = 19/79 (24%), Positives = 37/79 (46%)
Frame = +2
Query: 17 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQ 196
N + KI ++G+ L+RG + G A YF + + + + P+ + A A
Sbjct: 63 NSVIKISSTEGVYSLWRGISSVIMGAGPSHAIYFSVLEFFKSKINASPDRPLASALAGAC 122
Query: 197 TVTTVAGIISYPFDTVRRR 253
+ T++ PFD +++R
Sbjct: 123 AI-TISDAFMTPFDVIKQR 140
Score = 28.3 bits (60), Expect = 1.2
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 292 YKNTIHCWATIAKTEGTSAFF 354
YK+ +HC T+ + EG AF+
Sbjct: 148 YKSALHCATTVFRNEGLGAFY 168
Score = 27.5 bits (58), Expect = 2.1
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Frame = +2
Query: 17 NCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLP-----DPKNTPIV-- 175
+C + +F+++GL Y + + I + A YDT L DP + I
Sbjct: 153 HCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDTCMSFLNPNAVYDPTSHIISGG 212
Query: 176 ISWAIAQTVTTVAGII 223
+S AIA ++TT ++
Sbjct: 213 LSGAIASSLTTPLDVV 228
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 33.9 bits (74), Expect = 0.025
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +2
Query: 8 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 130
G+ + + ++KS+GL+GL+RGFG + + F FY+
Sbjct: 283 GIRHVLGGLYKSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
Score = 31.5 bits (68), Expect = 0.13
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLI-GLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVI 178
++G+ C S I +G+ GLY G + G + A +F Y+ + L N P +
Sbjct: 52 YNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETL 111
Query: 179 SWAIAQTVTTV-AGIISYPFDTVRRR 253
+ +A V + A ++ P + ++ R
Sbjct: 112 CFLLAGFVGDLFASVVYVPSEVLKTR 137
Score = 27.9 bits (59), Expect = 1.6
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = +1
Query: 322 IAKTEGTSAFFKGAFSNVLRGTG-GAFVLVLYDEIKKV 432
IAK EG FF G + +LR F L+ Y+++++V
Sbjct: 165 IAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKLRQV 202
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 32.3 bits (70), Expect = 0.075
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTT 208
KI+K +GL YRG S+ G ++ F Y+ + L D +A T++
Sbjct: 239 KIYKYEGLAAFYRGLFPSLFG-TLHVGIQFPLYEYFKSFLDDFFGKKSNFHIVLAATLSK 297
Query: 209 V-AGIISYPFDTVRRR 253
+ A ++YP + +R R
Sbjct: 298 IAASTVTYPHEVLRTR 313
Score = 29.9 bits (64), Expect = 0.40
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 292 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIKKVL 435
Y NT + I K EG +AF++G F ++ LY+ K L
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGIQFPLYEYFKSFL 277
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 31.5 bits (68), Expect = 0.13
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 139
F + +C K++GL GLYRG + + + R+ F YD+ +
Sbjct: 50 FPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSLK 95
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 31.1 bits (67), Expect = 0.17
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR---GMLPDPKNTPI 172
F+ L + ++ +G+ + G G++V ++ + FG Y+ + G+ +N
Sbjct: 169 FATLLHTTKVLWNRNGIRSFFVGNGINVLKVMPESSIKFGTYEAMKRVLGISSSSENHSP 228
Query: 173 VISWAIAQTVTTVAGIISYPFDTVRRRR*CS 265
+ S+ +VA + YP DT++ R CS
Sbjct: 229 LYSYLAGGMAGSVAQMFIYPVDTLKFRIQCS 259
Score = 28.7 bits (61), Expect = 0.92
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 29 KIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 130
+++KS G+ G YRG V + G+ Y A+ G ++
Sbjct: 277 ELYKSVGIRGYYRGVLVGILGMFPYSATDLGTFE 310
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = +1
Query: 253 QMMQSGRAKSDILYKNTIHCWATIAKTEGTSAFFKGAFSNVLR-GTGGAFVLVLYDEIKK 429
++ G + Y I C+ K EG +KG N+L+ A ++Y+ KK
Sbjct: 362 RLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSPNLLKVAPSVAISYLVYENCKK 421
Query: 430 VL 435
L
Sbjct: 422 WL 423
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 30.7 bits (66), Expect = 0.23
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTAR 139
++ + + I I+K +G+ G +RGFGV+ + Y FY+ ++
Sbjct: 141 YTTIYSSIRDIWKKEGISGFFRGFGVTALRDAPHAGLYVYFYELSK 186
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +1
Query: 289 LYKNTIHCWATIAKTEGTSAFFKGAFSNVLR 381
+YKN +H + EG F G F VLR
Sbjct: 244 IYKNFLHSAKLVYANEGFRGFLDGFFLRVLR 274
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.3 bits (65), Expect = 0.30
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 289 LYKNTIHCWATIAKTEGTSAFFKG 360
+Y N + C I+K EG +AF+KG
Sbjct: 54 IYNNALDCVKKISKNEGLAAFYKG 77
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 17 NCISKIFKSDGLIGLYRGFGVSVQGI 94
+C+ KI K++GL Y+G + + GI
Sbjct: 60 DCVKKISKNEGLAAFYKGTVLPLLGI 85
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 29.9 bits (64), Expect = 0.40
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPD 154
+ + + I I+K++G+ G +RG+ ++ II + + Y+T ML D
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKMLHD 316
Score = 29.1 bits (62), Expect = 0.70
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 292 YKNTIHCWATIAKTEGTSAFFKGAFSNVLR 381
YKN I KTEG + FF+G SN+L+
Sbjct: 266 YKNIKSAIFHIYKTEGINGFFRGYSSNMLK 295
Score = 28.3 bits (60), Expect = 1.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 2 FSGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYD 130
++ L + + KI+ +GLIG +RG G + Y A F ++
Sbjct: 56 YTSLTSTLVKIWNREGLIGFFRGNGTNCLRAFPYGAVQFATFN 98
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 28.7 bits (61), Expect = 0.92
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFY-DTARGML 148
G+ I I+K++G+ GLYRG V G+ Y+ F D RG L
Sbjct: 245 GIMQTIMSIYKNNGIKGLYRG-AVPRMGLGAYQTFVMVFLADCVRGYL 291
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.7 bits (61), Expect = 0.92
Identities = 19/98 (19%), Positives = 41/98 (41%)
Frame = +2
Query: 5 SGLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISW 184
S L + + +G+ L+RG V+ ++Y A+ F + + + + +++
Sbjct: 49 SSLRPVFKETVQKEGVRALWRGNVVAELLYLVYGAAEFVAFSKLKHLTENLAMNDHAVNF 108
Query: 185 AIAQTVTTVAGIISYPFDTVRRRR*CSLVVPRAISCTR 298
+ A + SYP DT+R + P + T+
Sbjct: 109 LCGTSAGIFATLTSYPLDTMRTKFASYAKTPHMLPATK 146
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 27.9 bits (59), Expect = 1.6
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 8 GLGNCISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGMLPDP 157
G G ++I+K G GL+ G GV + I + + YD+ + M P
Sbjct: 258 GAGAAAARIYKEIGFSGLWNGLGVRIVMIGTLTGAQWLIYDSFKIMCGFP 307
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 17 NCISKIFKSDGLIGLYRGFGVSVQGI 94
+CI K + +G GLY+G S+ G+
Sbjct: 207 DCIIKTIRLEGFRGLYKGLSASLLGV 232
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 292 YKNTIHCWATIAKTEGTSAFFKGAFSNVLRGTGGAFVLVLYDEIK 426
Y+++I C + EG +KG +++L VLY++ K
Sbjct: 202 YRSSIDCIIKTIRLEGFRGLYKGLSASLLGVGESTLQWVLYEKFK 246
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +2
Query: 23 ISKIFKSDGLIGLYRGFGVSVQGIIIYRASYFGFYDTARGML 148
+ +I+K +G+ G +G G+ V + + Y G Y+ + L
Sbjct: 206 VRRIYKENGIFGFEKGLGLRVFASSLGLSIYLGTYEHVKSHL 247
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 27.1 bits (57), Expect = 2.8
Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
Frame = +2
Query: 50 LIGLYRGFGVSVQGIIIYRASYFGFYDTARGM---------LPDPKNTPIVISW--AIAQ 196
+ YRGF V++ GI Y F YD A + K+ + +W +
Sbjct: 184 ICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCG 243
Query: 197 TVTTVAG-IISYPFDTVRRR 253
V G +SYPF+ RR+
Sbjct: 244 AFAGVCGQTVSYPFEVCRRK 263
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 140 GMLPDPKNTPIVISWAIAQTVTTV 211
GMLPDPK+ P++ +T V
Sbjct: 89 GMLPDPKSIPVISQALTKYKITDV 112
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.5
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 410 KTSTKAPPVPLRTLEKAPL 354
K S+KAPPVPL + + P+
Sbjct: 1016 KLSSKAPPVPLPSADAPPI 1034
>SPAC2F3.01 ||SPAC323.09|mannosyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 6.5
Identities = 12/48 (25%), Positives = 22/48 (45%)
Frame = +2
Query: 74 GVSVQGIIIYRASYFGFYDTARGMLPDPKNTPIVISWAIAQTVTTVAG 217
G+ + G+I+ + Y+T R M+P P +S + T+ G
Sbjct: 12 GIPICGVILLILWGYSLYNTLRFMVPGKATEPFTLSLSDVSDDTSAPG 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,533,932
Number of Sequences: 5004
Number of extensions: 47340
Number of successful extensions: 156
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 353266144
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -