Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11054
         (663 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49065-1|AAB53237.1|  562|Homo sapiens interleukin-1 receptor-re...    31   4.9  
DQ131903-1|AAZ38712.1|  575|Homo sapiens interleukin 1 receptor-...    31   4.9  
BC043144-1|AAH43144.1| 1163|Homo sapiens regulating synaptic mem...    31   4.9  
AF284434-1|AAG21368.1|  575|Homo sapiens IL-1Rrp2 protein.             31   4.9  
AC007271-2|AAX81989.1|  378|Homo sapiens unknown protein.              31   4.9  
AB018294-1|BAA34471.2| 1200|Homo sapiens KIAA0751 protein protein.     31   4.9  

>U49065-1|AAB53237.1|  562|Homo sapiens interleukin-1
           receptor-related protein protein.
          Length = 562

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 273 LQSLKKRIEIVRH*GKWQTINCHHRSPKTCLYHARRWQERRQTEDQRGERRT 428
           L +L    + + H GK  ++ CH   PK+C+    +W   +   + +GER T
Sbjct: 125 LPNLSDEYKQILHLGKDDSLTCHLHFPKSCVLGPIKWY--KDCNEIKGERFT 174


>DQ131903-1|AAZ38712.1|  575|Homo sapiens interleukin 1
           receptor-like 2 protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 273 LQSLKKRIEIVRH*GKWQTINCHHRSPKTCLYHARRWQERRQTEDQRGERRT 428
           L +L    + + H GK  ++ CH   PK+C+    +W   +   + +GER T
Sbjct: 125 LPNLSDEYKQILHLGKDDSLTCHLHFPKSCVLGPIKWY--KDCNEIKGERFT 174


>BC043144-1|AAH43144.1| 1163|Homo sapiens regulating synaptic membrane
            exocytosis 2 protein.
          Length = 1163

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 643  RSIPASPAITR--PRVGS*LARARIT*FLRAGPHSGSRGRMMPQYSPPRPIATVDSSPG 473
            RS P SPA++R  PR GS       T      P +G RGR +PQ  PP+   T+D   G
Sbjct: 879  RSAPPSPALSRSHPRTGSVQTSPSST------PVAGRRGRQLPQL-PPK--GTLDRKAG 928


>AF284434-1|AAG21368.1|  575|Homo sapiens IL-1Rrp2 protein.
          Length = 575

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 273 LQSLKKRIEIVRH*GKWQTINCHHRSPKTCLYHARRWQERRQTEDQRGERRT 428
           L +L    + + H GK  ++ CH   PK+C+    +W   +   + +GER T
Sbjct: 125 LPNLSDEYKQILHLGKDDSLTCHLHFPKSCVLGPIKWY--KDCNEIKGERFT 174


>AC007271-2|AAX81989.1|  378|Homo sapiens unknown protein.
          Length = 378

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = +3

Query: 273 LQSLKKRIEIVRH*GKWQTINCHHRSPKTCLYHARRWQERRQTEDQRGERRT 428
           L +L    + + H GK  ++ CH   PK+C+    +W   +   + +GER T
Sbjct: 125 LPNLSDEYKQILHLGKDDSLTCHLHFPKSCVLGPIKWY--KDCNEIKGERFT 174


>AB018294-1|BAA34471.2| 1200|Homo sapiens KIAA0751 protein protein.
          Length = 1200

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -3

Query: 643  RSIPASPAITR--PRVGS*LARARIT*FLRAGPHSGSRGRMMPQYSPPRPIATVDSSPG 473
            RS P SPA++R  PR GS       T      P +G RGR +PQ  PP+   T+D   G
Sbjct: 916  RSAPPSPALSRSHPRTGSVQTSPSST------PVAGRRGRQLPQL-PPK--GTLDRKAG 965


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,974,553
Number of Sequences: 237096
Number of extensions: 2414735
Number of successful extensions: 6792
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6785
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)