Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11052
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.17 
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    25   0.89 
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.6  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.6  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    23   3.6  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.7  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.7  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   4.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 27.1 bits (57), Expect = 0.17
 Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = +2

Query: 425 RCTRPVVPPVS-CWTPATVSPTPCPSTKDRTPPRHPASGLSRS---RPHRLPHEDPHRAR 592
           R  R VVPP   C  P+T+ P P     D   P++       +    P  +P  D +R R
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIPVPDKNRPR 254


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 431 TRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHP 529
           T  + P ++CW+  +  P P   +   TP + P
Sbjct: 314 TTVMSPTINCWSLTSSPPPPYQISAQPTPSQSP 346


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
 Frame = +2

Query: 374 SKHSTRPPCTSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRS 550
           S+ +T P     SK   +   R V  P    TP+T +  P  + K  +P           
Sbjct: 195 SRTTTSPTKVKASKASPAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQSYRPTGNI 254

Query: 551 RPH 559
            PH
Sbjct: 255 TPH 257


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -3

Query: 98  GTRREEHHLLRNRP 57
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 342 GQQREDDPDHVRNIQHARHVRRHPSRA 422
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 485 TPCPSTKDRTPPRHPASG 538
           TP  S+    PP HP SG
Sbjct: 64  TPNKSSTSPYPPNHPLSG 81


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 98  GTRREEHHLLRNRP 57
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 98  GTRREEHHLLRNRP 57
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 196 PDPQIPHRTRNRH 234
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 297 GGDTQLIVEGMMPNLSMSSQLVTIPCSM 214
           GGD    ++    NLS  S  +T+P S+
Sbjct: 19  GGDHSENMQDEPENLSNKSNSITVPLSI 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,683
Number of Sequences: 336
Number of extensions: 4494
Number of successful extensions: 27
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)