Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11052
(775 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 172 4e-44
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 111 8e-26
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 104 2e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 93 3e-20
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 69 1e-12
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 61 1e-10
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 60 3e-10
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 53 5e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 41 2e-04
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.10
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 32 0.10
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.18
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 30 0.42
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 29 0.56
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 29 0.98
SPBC409.20c |psh3||ER chaperone SHR3 homologue Psh3|Schizosaccha... 28 1.3
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 2.3
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 27 3.0
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.0
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 3.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.0
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 3.9
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.9
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 27 3.9
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.2
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 26 5.2
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 5.2
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 6.9
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 9.1
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 9.1
SPBC16G5.08 |trp4||phosphoribosylanthranilate transferase Trp4|S... 25 9.1
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 172 bits (419), Expect = 4e-44
Identities = 79/89 (88%), Positives = 83/89 (93%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+IWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN PA YVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNAPAFYVAIQAVLSLY 143
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
ASGRTTGIVLDSGDGV+HTVPIYEG P
Sbjct: 144 ASGRTTGIVLDSGDGVTHTVPIYEGYALP 172
Score = 161 bits (391), Expect = 1e-40
Identities = 77/84 (91%), Positives = 81/84 (96%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIKEKLCYVALDFEQE+ T
Sbjct: 170 ALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQELQT 229
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
AA SSSLEKSYELPDGQVITIGNE
Sbjct: 230 AAQSSSLEKSYELPDGQVITIGNE 253
Score = 159 bits (385), Expect = 5e-40
Identities = 70/74 (94%), Positives = 72/74 (97%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 11 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYP 70
Query: 215 IEHGIVTNWDDMER 256
IEHGIV NWDDME+
Sbjct: 71 IEHGIVNNWDDMEK 84
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 111 bits (268), Expect = 8e-26
Identities = 47/84 (55%), Positives = 65/84 (77%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
++W +TF+ +L++ P +LLTE P+NP ANREKM + MFE + +YVAIQAVLSLY
Sbjct: 84 QLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGFGGVYVAIQAVLSLY 143
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYE 504
A G ++G+V+DSGDGV+H VP+YE
Sbjct: 144 AQGLSSGVVVDSGDGVTHIVPVYE 167
Score = 90.6 bits (215), Expect = 2e-19
Identities = 40/85 (47%), Positives = 60/85 (70%)
Frame = +3
Query: 507 IALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 686
+ L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++KEKLCYV+ D E +
Sbjct: 169 VVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKEKLCYVSYDLELDHK 228
Query: 687 TAASSSSLEKSYELPDGQVITIGNE 761
+ ++ L ++Y LPDG+VI +G+E
Sbjct: 229 LSEETTVLMRNYTLPDGRVIKVGSE 253
Score = 72.9 bits (171), Expect = 5e-14
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLK 208
DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++ R +L +K
Sbjct: 9 DNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAVRSLLQVK 68
Query: 209 YPIEHGIVTNWDDMER 256
YP+E+GI+ ++++M +
Sbjct: 69 YPMENGIIRDFEEMNQ 84
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 104 bits (249), Expect = 2e-23
Identities = 47/91 (51%), Positives = 66/91 (72%), Gaps = 1/91 (1%)
Frame = +1
Query: 253 EIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL 429
EIW + + ++ L PEEHP+LLTE PL N+EK+ + +ET N PA+ ++Q VL+L
Sbjct: 88 EIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYETLNVPALSFSLQPVLAL 147
Query: 430 YASGRTTGIVLDSGDGVSHTVPIYEGSHSPT 522
YAS RTTGIVL+ GDG++H+VPIY+G P+
Sbjct: 148 YASARTTGIVLECGDGLTHSVPIYDGFSIPS 178
Score = 98.7 bits (235), Expect = 8e-22
Identities = 43/73 (58%), Positives = 54/73 (73%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L ++ P
Sbjct: 15 DNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRP 74
Query: 215 IEHGIVTNWDDME 253
IE GI+ NW DME
Sbjct: 75 IERGIIQNWSDME 87
Score = 83.4 bits (197), Expect = 3e-17
Identities = 38/84 (45%), Positives = 55/84 (65%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
++P AI + ++ GRD+TDYL L + G+ ++AE+EIVR+IKEK CYVA DF E+ +
Sbjct: 175 SIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIES 234
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
+Y+LPD Q IT+G E
Sbjct: 235 WTEHKPQIHTYQLPDNQTITLGTE 258
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 93.5 bits (222), Expect = 3e-20
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 8/91 (8%)
Frame = +1
Query: 259 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 438
W + + LR PE+H LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS
Sbjct: 109 WQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAAS 168
Query: 439 GRT--------TGIVLDSGDGVSHTVPIYEG 507
+ TG V+DSGDGV+H +P+ EG
Sbjct: 169 WTSSKVTDRSLTGTVVDSGDGVTHIIPVAEG 199
Score = 52.8 bits (121), Expect = 5e-08
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 24/99 (24%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK----------- 154
DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 11 DNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASKGSGHLSSKRAT 69
Query: 155 ---DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMERF 259
D ++G++A K +L YPI HG + NWD MERF
Sbjct: 70 EDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERF 108
Score = 33.9 bits (74), Expect = 0.026
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = +3
Query: 522 AILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDIKEKLCYVALDFEQEMA 686
+I + LAGRD+T ++ +L +R S TAER IKE+ CYV D +E +
Sbjct: 205 SIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----IKEECCYVCPDIVKEFS 256
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 68.5 bits (160), Expect = 1e-12
Identities = 32/85 (37%), Positives = 48/85 (56%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
++W + +L+ P EHP+L+TE NP NR K + MFE+ PA Y+A Q + +
Sbjct: 82 DLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCPATYLAKQETCAAF 141
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEG 507
ASG+ T ++D G S IY+G
Sbjct: 142 ASGKGTACLVDIGAERSSVSAIYDG 166
Score = 36.3 bits (80), Expect = 0.005
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
D GS + GF+G+D P+ V PS G + G + Y+ +S G + +K
Sbjct: 17 DPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNPG-MEIKNA 68
Query: 215 IEHGIVTNWD---DMERFGI 265
I +G V NWD D+ R+G+
Sbjct: 69 IRNGWVENWDVTVDLWRYGL 88
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 61.3 bits (142), Expect = 1e-10
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
++ +TF +L + EHP+ +TE NP R MT+++FE +N P++ I + S Y
Sbjct: 100 QVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNAPSVAYGIDGLFSFY 158
Query: 433 ASGR--TTGIVLDSGDGVSHTVPIYEG 507
+ + ++GIVL+ G+ SH +P+ G
Sbjct: 159 HNTKPSSSGIVLNLGNAASHVIPVLNG 185
Score = 44.8 bits (101), Expect = 1e-05
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL-KY 211
DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++ +
Sbjct: 30 DNGSWQLRAGWGGEKDPKLVFDNLVSRYRDR----KLSRTSTLVGNDTLIEVGSRSIARS 85
Query: 212 PIEHGIVTNWDDMER 256
P E +++NWD ME+
Sbjct: 86 PFERNVISNWDLMEQ 100
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 60.1 bits (139), Expect = 3e-10
Identities = 24/83 (28%), Positives = 48/83 (57%)
Frame = +1
Query: 259 WHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 438
W +L+V P E+ +++TE NP++ R+++ + FE + PA Y+ QAV +A+
Sbjct: 87 WERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFAN 146
Query: 439 GRTTGIVLDSGDGVSHTVPIYEG 507
++T +++D G + P+ +G
Sbjct: 147 SKSTALIVDIGSDNASVTPVVDG 169
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 52.8 bits (121), Expect = 5e-08
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 522 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASS 701
A+ R+D+ G+ LT+YL ++++ R Y+ E IV +IKE +CYV+ +F+++M
Sbjct: 182 AVKRVDVGGKLLTNYLKEVISYRKYNMME--ETYIVNEIKESVCYVSQNFKEDMEICHEK 239
Query: 702 --SSLEKSYELPD 734
S LE Y LPD
Sbjct: 240 PRSKLEICYALPD 252
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 40.7 bits (91), Expect = 2e-04
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Frame = +1
Query: 259 WHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLS 426
W H Y+ L P + +PV L +RE TQ FE P +A + ++
Sbjct: 129 WKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFEECQVPGFTIAYEPLMG 187
Query: 427 LYASGRTTGIVLDSGDGVSHTVPIYEG 507
LYA G G+V+D G + PI +G
Sbjct: 188 LYAIGILHGLVIDIGYEKTDITPILDG 214
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +1
Query: 271 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 414
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 31.9 bits (69), Expect = 0.10
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 380 HSTRPPCTSPSK-PCSRCTRPV-VPPV-SCWTPATVSPTPCPSTKDRTPPRHPASGLSRS 550
HS PP +P C RP VP V S W P ++ P PP P +
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQV 194
Query: 551 RPHRLPH 571
P+RLPH
Sbjct: 195 HPNRLPH 201
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.18
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 71 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 29.9 bits (64), Expect = 0.42
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 437 PVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSR---SRPHR 562
P++PP+ C A + TP RTP S LS S PH+
Sbjct: 452 PLIPPLKCDPNAFSASTPASGAVSRTPSSVSLSSLSNVNSSMPHK 496
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 29.5 bits (63), Expect = 0.56
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +2
Query: 464 TPATVSPTPCPSTKDRTPPRHPASGLSRSRP 556
TPA +P P P+ K PP S +S S P
Sbjct: 728 TPAPPTPAPTPAVKHHPPPPPVRSSISPSMP 758
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 28.7 bits (61), Expect = 0.98
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 528 GWRGGVRSFVDGHGVGDTVAGVQHDTGGTTGR 433
G RGG G G GDTV GG GR
Sbjct: 128 GGRGGRYGSSGGRGAGDTVVSRSSGAGGARGR 159
>SPBC409.20c |psh3||ER chaperone SHR3 homologue
Psh3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 215
Score = 28.3 bits (60), Expect = 1.3
Identities = 20/72 (27%), Positives = 31/72 (43%)
Frame = +3
Query: 483 PHRAHLRRIALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVA 662
P HL +A H ++ LAG L+++ GY + +RE D++E+
Sbjct: 135 PRNMHLSVLAASHVLVEFLLAGV----ILIQLGYVFGYHVQSIQQREYAEDMREQELAEK 190
Query: 663 LDFEQEMATAAS 698
E E AT S
Sbjct: 191 AKLESESATTQS 202
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 179 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 90
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 1.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 505
P T+P P T PV P S P+ P P PS++
Sbjct: 1037 PSTAPPVPIPTSTPPV-PKSSSGAPSAPPPVPAPSSE 1072
Score = 26.6 bits (56), Expect = 3.9
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDRTPPRHPASGLSRSRP 556
PP +P P P VPP S P A + P P P+ K P + S S P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTP 1252
Query: 557 HRLPHEDPH 583
R PH
Sbjct: 1253 -RSSVPSPH 1260
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 27.5 bits (58), Expect = 2.3
Identities = 21/76 (27%), Positives = 30/76 (39%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPHE 574
P +P+ P + P+ PP+ PA P P P+ P PA + LP +
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPA-APPLP-PAAPAPPPAPAPAPAAPVASIAELPQQ 497
Query: 575 DPHRARLLVHYHRRAG 622
D RA L+ G
Sbjct: 498 D-GRANLMASIRASGG 512
Score = 27.1 bits (57), Expect = 3.0
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLP 568
PP PS P P +PP A ++P P P+ PP PA+ P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPP-----SAPIAP-PLPAGMPAAPPLPPAAPAPPPAPAPAP 484
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 625 SFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKI 765
+F +R S A SS + P +P+AP+R PTV++S S +
Sbjct: 335 AFTANRFSPAAPTTVSSERNAPPYPSAPTRPTP--PTVQTSSSAAPV 379
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 416 PCSRCTRPVVPPVSCWTPATVSPTPCPST 502
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.1 bits (57), Expect = 3.0
Identities = 21/61 (34%), Positives = 25/61 (40%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSR 553
S ST PP S S + + SC T ++ PT ST TP P S S S
Sbjct: 311 SSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTG-NSTTPVTPTVPPTSTSSTST 369
Query: 554 P 556
P
Sbjct: 370 P 370
Score = 25.8 bits (54), Expect = 6.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +2
Query: 407 PSKPCSRCTRPVVPPV-SCWTPA--TVSPTPCPSTKDRTPPRHPASGLSRSRP 556
PS S T +PP + TP TV PT ST PP +S + S P
Sbjct: 333 PSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSP 385
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 499
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 3.9
Identities = 20/73 (27%), Positives = 26/73 (35%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPH 571
P T P +P S + P P +V P P PP P L S +P+
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPN 1745
Query: 572 EDPHRARLLVHYH 610
R+ LL H
Sbjct: 1746 PG-DRSALLQQIH 1757
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -2
Query: 171 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 55
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Frame = +2
Query: 416 PCSRCTRPVVPPVSCWTPATVSPTPC---PSTKDRTPPRHPAS 535
P S RP +PP S PA+ P P P PP PA+
Sbjct: 140 PTSAPPRPSIPPPS---PASAPPIPSKAPPIPSSLPPPAQPAA 179
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = +2
Query: 413 KPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDRTPPRHPASGLSRSR 553
KP S+ TRP +P + T P P P + D R+P+ S+S+
Sbjct: 65 KPSSKATRPYIPSYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQSQ 114
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 313 LLTEAPLNPKANREKMTQIMFETFN 387
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -3
Query: 764 IFVSDSDDLTVGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLL 639
+ + +D VG+ L+ GAAG S GHF EV + + +LL
Sbjct: 345 VVTATADSTFVGRAASLV-GAAGQSQGHF-TEVLNGIGTILL 384
>SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1588
Score = 26.2 bits (55), Expect = 5.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 470 ATVSPTPCPSTKDRTPPRHPASGLSRSRP 556
A +SP P PS D P +PA + P
Sbjct: 1398 AAISPNPMPSAHDLLPTSNPAELFTNISP 1426
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 208 FEGQDTSFALCLISYIRVLLSHTDHHA 128
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 327 SPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRR 476
+PQ + E++ D++R++ +RH RR P +A + R H + R R
Sbjct: 1428 TPQSRSFTNENN-DNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR 1474
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +2
Query: 467 PATVSPTPCPSTKDRTPPRHPASGLSR 547
P+T S P P + TP R+P + L R
Sbjct: 186 PSTPSNGPAPVSTTATPSRNPVTRLQR 212
>SPBC16G5.08 |trp4||phosphoribosylanthranilate transferase
Trp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 354
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 622 KSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKIPLP 774
K+ V+ C S L + P L AP R PT+ + + P+P
Sbjct: 150 KNIVSITEQCKFSFLFAPMCHPTLKNVAPIRKQLGLPTIFNLVGPLLNPIP 200
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,325,331
Number of Sequences: 5004
Number of extensions: 73932
Number of successful extensions: 320
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 309
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 373338084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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