Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11052
(775 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 3e-45
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 179 3e-45
SB_56| Best HMM Match : Actin (HMM E-Value=0) 179 3e-45
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 179 3e-45
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 177 8e-45
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 169 2e-42
SB_54| Best HMM Match : Actin (HMM E-Value=0) 134 7e-32
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 122 3e-28
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 116 3e-26
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 74 1e-13
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 72 5e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 55 7e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 42 6e-04
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 7e-04
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 41 0.001
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 37 0.021
SB_15263| Best HMM Match : Jun (HMM E-Value=1.8) 36 0.036
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.11
SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.45
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 32 0.45
SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3) 32 0.59
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.78
SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09) 31 0.78
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.78
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.78
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.0
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.0
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.0
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55) 31 1.0
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.4
SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0) 31 1.4
SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06) 31 1.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_12273| Best HMM Match : fn3 (HMM E-Value=0.021) 31 1.4
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.4
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 1.8
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 30 1.8
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.8
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 30 2.4
SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016) 30 2.4
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_54325| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12) 29 3.2
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 29 3.2
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 29 4.2
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 4.2
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 4.2
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 4.2
SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.2
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 29 4.2
SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0) 29 4.2
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 29 4.2
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 29 4.2
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.2
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 29 4.2
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.2
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 29 4.2
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 29 5.5
SB_34828| Best HMM Match : W2 (HMM E-Value=6.9) 29 5.5
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 29 5.5
SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009) 28 7.3
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_30534| Best HMM Match : EGF (HMM E-Value=0.12) 28 7.3
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 7.3
SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 28 7.3
SB_162| Best HMM Match : Extensin_2 (HMM E-Value=0.79) 28 7.3
SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_49099| Best HMM Match : rve (HMM E-Value=2e-08) 28 7.3
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 28 7.3
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0) 28 7.3
SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08) 28 9.6
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 28 9.6
SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05) 28 9.6
SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3) 28 9.6
SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5) 28 9.6
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.6
SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11) 28 9.6
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 9.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 179 bits (435), Expect = 3e-45
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
ASGRTTGIV+DSGDGV+HTVPIYEG P
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALP 173
Score = 169 bits (411), Expect = 2e-42
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 171 ALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMET 230
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
AASSSSLEKSYELPDGQVITIGNE
Sbjct: 231 AASSSSLEKSYELPDGQVITIGNE 254
Score = 163 bits (396), Expect = 1e-40
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 215 IEHGIVTNWDDMER 256
IEHGIVTNWDDME+
Sbjct: 72 IEHGIVTNWDDMEK 85
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 179 bits (435), Expect = 3e-45
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 143
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
ASGRTTGIV+DSGDGV+HTVPIYEG P
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALP 172
Score = 167 bits (406), Expect = 9e-42
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL YVALDFEQEMAT
Sbjct: 170 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMAT 229
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
AA+SSSLEKSYELPDGQVITIGNE
Sbjct: 230 AAASSSLEKSYELPDGQVITIGNE 253
Score = 163 bits (396), Expect = 1e-40
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 11 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
Query: 215 IEHGIVTNWDDMER 256
IEHGIVTNWDDME+
Sbjct: 71 IEHGIVTNWDDMEK 84
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 179 bits (435), Expect = 3e-45
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 84 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 143
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
ASGRTTGIV+DSGDGV+HTVPIYEG P
Sbjct: 144 ASGRTTGIVMDSGDGVTHTVPIYEGYALP 172
Score = 170 bits (413), Expect = 1e-42
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 170 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQT 229
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
AASSSSLEKSYELPDGQVITIGNE
Sbjct: 230 AASSSSLEKSYELPDGQVITIGNE 253
Score = 163 bits (396), Expect = 1e-40
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 11 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
Query: 215 IEHGIVTNWDDMER 256
IEHGIVTNWDDME+
Sbjct: 71 IEHGIVTNWDDMEK 84
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 179 bits (435), Expect = 3e-45
Identities = 82/89 (92%), Positives = 86/89 (96%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
ASGRTTGIV+DSGDGV+HTVPIYEG P
Sbjct: 145 ASGRTTGIVMDSGDGVTHTVPIYEGYALP 173
Score = 170 bits (414), Expect = 9e-43
Identities = 83/84 (98%), Positives = 83/84 (98%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 171 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTT 230
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
AASSSSLEKSYELPDGQVITIGNE
Sbjct: 231 AASSSSLEKSYELPDGQVITIGNE 254
Score = 163 bits (396), Expect = 1e-40
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 215 IEHGIVTNWDDMER 256
IEHGIVTNWDDME+
Sbjct: 72 IEHGIVTNWDDMEK 85
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 177 bits (431), Expect = 8e-45
Identities = 81/84 (96%), Positives = 84/84 (100%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLY
Sbjct: 85 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLY 144
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYE 504
ASGRTTGIV+DSGDGVSHTVPIYE
Sbjct: 145 ASGRTTGIVMDSGDGVSHTVPIYE 168
Score = 163 bits (396), Expect = 1e-40
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 12 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 71
Query: 215 IEHGIVTNWDDMER 256
IEHGIVTNWDDME+
Sbjct: 72 IEHGIVTNWDDMEK 85
Score = 121 bits (292), Expect = 6e-28
Identities = 59/70 (84%), Positives = 62/70 (88%)
Frame = +3
Query: 552 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 731
D + + I ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM TAASSSS+EKSYELP
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSIEKSYELP 217
Query: 732 DGQVITIGNE 761
DGQVITIGNE
Sbjct: 218 DGQVITIGNE 227
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 169 bits (411), Expect = 2e-42
Identities = 82/84 (97%), Positives = 83/84 (98%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM T
Sbjct: 133 ALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQT 192
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
AASSSSLEKSYELPDGQVITIGNE
Sbjct: 193 AASSSSLEKSYELPDGQVITIGNE 216
Score = 163 bits (396), Expect = 1e-40
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 214
DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 11 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 70
Query: 215 IEHGIVTNWDDMER 256
IEHGIVTNWDDME+
Sbjct: 71 IEHGIVTNWDDMEK 84
Score = 100 bits (239), Expect = 1e-21
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = +1
Query: 346 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEG P
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALP 135
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 134 bits (324), Expect = 7e-32
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = +1
Query: 253 EIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
++W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
ASGRTTG V D GDGVSHTVP+Y+G P
Sbjct: 2189 ASGRTTGTVFDCGDGVSHTVPVYDGYWLP 2217
Score = 113 bits (271), Expect = 2e-25
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +3
Query: 513 LPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATA 692
LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+KE LCY A+D+E+E+ A
Sbjct: 2216 LPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETLCYCAMDYERELKEA 2275
Query: 693 ASSSSLEKSYELPDGQVITIGNE 761
+S E Y LPDGQ I IG+E
Sbjct: 2276 ETSDDCEAPYMLPDGQSIRIGSE 2298
Score = 56.4 bits (130), Expect = 2e-08
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 127
DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2100 DNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 122 bits (294), Expect = 3e-28
Identities = 52/73 (71%), Positives = 65/73 (89%)
Frame = +1
Query: 301 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 480
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD+GDGV
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDAGDGV 185
Query: 481 SHTVPIYEGSHSP 519
SH+VPIYEG P
Sbjct: 186 SHSVPIYEGFAMP 198
Score = 54.8 bits (126), Expect = 7e-08
Identities = 31/81 (38%), Positives = 47/81 (58%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IKE+
Sbjct: 196 AMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKEE-------------- 241
Query: 690 AASSSSLEKSYELPDGQVITI 752
S S + Y LPDG +I +
Sbjct: 242 --SMESERQQYALPDGSIIEV 260
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 116 bits (278), Expect = 3e-26
Identities = 54/58 (93%), Positives = 57/58 (98%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 683
ALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTAEREIVRDIKEKLCYVALDF QE+
Sbjct: 49 ALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
Score = 91.1 bits (216), Expect = 9e-19
Identities = 42/51 (82%), Positives = 45/51 (88%)
Frame = +1
Query: 367 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEG P
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALP 51
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 106 bits (254), Expect = 2e-23
Identities = 47/89 (52%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 IWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 432
+W +TF +++ + P VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LY
Sbjct: 88 VWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLY 147
Query: 433 ASGRTTGIVLDSGDGVSHTVPIYEGSHSP 519
A G TG+V+DSGDGV+H P+YEG P
Sbjct: 148 AQGLLTGVVIDSGDGVTHICPVYEGFALP 176
Score = 93.9 bits (223), Expect = 1e-19
Identities = 43/84 (51%), Positives = 58/84 (69%)
Frame = +3
Query: 510 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +KEKLCYV + EQE
Sbjct: 174 ALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLCYVGYNIEQEQKL 233
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
A ++ L + Y LPDG+V+ + E
Sbjct: 234 ALETTVLVEQYTLPDGRVVKLSGE 257
Score = 76.6 bits (180), Expect = 2e-14
Identities = 41/95 (43%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLK 208
DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R +L +
Sbjct: 12 DNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVN 71
Query: 209 YPIEHGIVTNWDDMERFGIIPSTMSCVS-PPRNTQ 310
YP+++GIV NWDDM+ S ++ PRNT+
Sbjct: 72 YPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTK 106
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 74.1 bits (174), Expect = 1e-13
Identities = 29/68 (42%), Positives = 50/68 (73%)
Frame = +1
Query: 304 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 483
HP+L++EA N + REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG +
Sbjct: 34 HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQT 93
Query: 484 HTVPIYEG 507
VP+++G
Sbjct: 94 SAVPVHDG 101
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 72.1 bits (169), Expect = 5e-13
Identities = 35/84 (41%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +3
Query: 513 LPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIKEKLCYVALDFEQEMAT 689
L H + L++ G LT+ L + L + RG++FT+++ +IV DIKEK+CY++ D +E+
Sbjct: 801 LNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHN 860
Query: 690 AASSSSLEKSYELPDGQVITIGNE 761
++ L K Y LPDGQ+I+IG E
Sbjct: 861 YKTNEGLTKFYTLPDGQMISIGYE 884
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 205
DNG G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 706 DNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
Score = 35.1 bits (77), Expect = 0.064
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +1
Query: 412 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 507
Q LSLYASG T G+ L SG + IYEG
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEG 798
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 127
D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1362 DVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/40 (50%), Positives = 25/40 (62%)
Frame = +2
Query: 140 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMERF 259
G+ D ++GDEA K T K+PI H IV +WD MERF
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERF 316
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 448 TGIVLDSGDGVSHTVPI 498
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -1
Query: 124 MAGPSHDRGEHGARSIISCETGLAHTGAIV 35
MA + D GE+G+ SI+S ETGLAHTGAI+
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAII 30
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 693 ASSSSLEKSYELPDGQVITIGNE 761
A+S LEK+YELPDGQVI+IGNE
Sbjct: 5 ANSPILEKTYELPDGQVISIGNE 27
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +1
Query: 256 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 435
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 436 SGRTTGIV 459
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 36.7 bits (81), Expect = 0.021
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +1
Query: 379 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEG 507
++ T A+ + S RT TG V+DSGDGV+H +P+ EG
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEG 81
Score = 36.3 bits (80), Expect = 0.028
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 525 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 686
I + +AGRD+T ++ ++L ER E + IKE+ Y+ D +E A
Sbjct: 88 IKHIPIAGRDITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEFA 141
>SB_15263| Best HMM Match : Jun (HMM E-Value=1.8)
Length = 315
Score = 35.9 bits (79), Expect = 0.036
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 383 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDRTPPRHPASGLSRSRPH 559
+T T+P+K S T+PV+ P + P T+ P +P + + PP P R++P
Sbjct: 125 TTSTTATTPAKTTSATTKPVMTPTTP-APMTLPPISPIDPPRTQPPPIFPIDP-PRTQPP 182
Query: 560 RLPHEDPHRAR 592
+P DP R +
Sbjct: 183 PIPPIDPPRTQ 193
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.5 bits (78), Expect = 0.048
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPP 520
PP P P + TRP VP +T PTP P T PP
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPP 961
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Frame = +2
Query: 377 KHSTRPPCTSPSKPCSRCTRPVVP-PVSCWTPATVSPTPCPSTKDR-TPPRHPASGLSRS 550
K +T PP T+P+ P P P P++ P + P P P R T P P + S +
Sbjct: 889 KTTTAPP-TTPTTPKPTTPAPPPPLPLAPEPPPPLPPPPPPIQTTRPTVPTTPTTQASTT 947
Query: 551 RP 556
RP
Sbjct: 948 RP 949
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 383 STRPPCTSPSKPCSRC--TRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHP 529
+TRP T P+ P ++ TRP PP P + P P P+T+ PP P
Sbjct: 931 TTRP--TVPTTPTTQASTTRPTPPP-----PTSALPPPIPATQVPPPPLPP 974
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSC 460
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 380 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 493
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 493
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_20869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1212
Score = 33.1 bits (72), Expect = 0.26
Identities = 29/102 (28%), Positives = 35/102 (34%), Gaps = 1/102 (0%)
Frame = +2
Query: 278 MSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVPPVS 457
M PPR CS K PP P P + P PP +
Sbjct: 997 MQPAKPPRQHTQCSIDPVPHLKPPGPTEQPVPPKRKASPPSAQPLPPPRK---PSPPPSA 1053
Query: 458 CWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPHE-DP 580
P P+P PS + PPR P S S+P P + DP
Sbjct: 1054 VPIPPPRKPSPPPS-EPAPPPRQPPPP-STSQPVPPPRQPDP 1093
Score = 31.9 bits (69), Expect = 0.59
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTP--PRHPASGLSRSRPHRLP 568
P P KP + P PP P+T P P P D P P HP R +P P
Sbjct: 1055 PIPPPRKPSPPPSEPAPPPRQPPPPSTSQPVPPPRQPDPIPTNPAHPTEPPPR-QPKPTP 1113
Query: 569 HEDP 580
P
Sbjct: 1114 APRP 1117
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +2
Query: 395 PCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDRTPP--RHPASGLSRSRPH 559
P +P P S P +PP + TP+ P P PS PP P + + S+P
Sbjct: 906 PYNTPMPPISSTPYQAPPTLPPTTLTTPSWSQPVPVPSMYQPQPPGIMQPPTSIPPSQPM 965
Query: 560 RLPHEDP 580
P P
Sbjct: 966 APPSFPP 972
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 32.3 bits (70), Expect = 0.45
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 35 DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY- 211
D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + + L Y
Sbjct: 239 DCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYSALFYV 290
Query: 212 -PIEHGIVTNWD 244
P + G + NWD
Sbjct: 291 LPFQKGFLVNWD 302
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 352 EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEG 507
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNG 376
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = +3
Query: 615 EREIVRDIKEKLCYVALDFEQEMATA---ASSSSLEKSYELPD 734
E ++ +KE CYV+ F ++M A +++ + Y LPD
Sbjct: 392 ETFVINQVKEDTCYVSSQFYKDMEIARQRGKENTIVREYVLPD 434
>SB_49341| Best HMM Match : Rad21_Rec8_N (HMM E-Value=2.3)
Length = 549
Score = 31.9 bits (69), Expect = 0.59
Identities = 34/142 (23%), Positives = 52/142 (36%), Gaps = 3/142 (2%)
Frame = +2
Query: 164 VGDEAQSKRGILTLKYPIEHGIVTNWDDMERFGIIPSTMSCVSPPRNTQSCSXXXXXXXX 343
+ ++QS+ +L I HG +T+ + G P + + S +
Sbjct: 309 ISRDSQSREEFASLMRAINHGTLTSQNSFSLNG--PGALELMRGSSQNSSRASTPSPTMG 366
Query: 344 XXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS-TKDRTPP 520
+ +T PP ++PS T PPVS TP+ P PS T + P
Sbjct: 367 KTLIQYNPVSTPSNT-PPVSTPSHTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVSTP 423
Query: 521 RH--PASGLSRSRPHRLPHEDP 580
H P S S + P P P
Sbjct: 424 SHTPPVSTPSNTPPVSTPSHTP 445
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS-TKDRTPPRH--PASGLS 544
S S PP ++PS T PPVS TP+ P PS T + P H P S S
Sbjct: 403 STPSHTPPVSTPSHTPPVSTPSHTPPVS--TPSNTPPVSTPSHTPPVSTPSHTPPVSTPS 460
Query: 545 RSRPHRLPHEDP 580
+ P P P
Sbjct: 461 HTPPVSTPSHTP 472
Score = 30.7 bits (66), Expect = 1.4
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS-TKDRTPPRH--PASGLS 544
S S PP ++PS T PPVS TP+ P PS T + P H P S S
Sbjct: 421 STPSHTPPVSTPSNTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 478
Query: 545 RSRPHRLPHEDP 580
+ P P P
Sbjct: 479 HTPPVSTPSNTP 490
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS-TKDRTPPRH--PASGLS 544
S S PP ++PS T PPVS TP+ P PS T + P H P S S
Sbjct: 430 STPSNTPPVSTPSHTPPVSTPSHTPPVS--TPSHTPPVSTPSHTPPVSTPSHTPPVSTPS 487
Query: 545 RSRPHRLPHEDP 580
+ P P P
Sbjct: 488 NTPPVFTPSHTP 499
Score = 28.3 bits (60), Expect = 7.3
Identities = 32/103 (31%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Frame = +2
Query: 269 PSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVVP 448
PS VS P NT S + T PP ++PS T P
Sbjct: 423 PSHTPPVSTPSNTPPVSTPSHTPPVSTPSHTPPVSTPSHT-PPVSTPSHTPPVSTPSHTP 481
Query: 449 PVSCWTPATVSPTPCPS-TKDRTPPRH--PASGLSRSRPHRLP 568
PVS TP+ P PS T P H P S S S P P
Sbjct: 482 PVS--TPSNTPPVFTPSHTPPVFTPSHTPPVSTPSNSPPVSTP 522
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 395 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPA 532
P T PC + CT+ +P +TP T TPC TK TP P+
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPC--TKRYTPSTEPS 891
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Frame = +2
Query: 371 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC-----PSTKDRTP 517
C++ T PCT PC+ CT P +TP+T TPC P T+ TP
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPCTERYSPCTERYTP 681
Score = 29.5 bits (63), Expect = 3.2
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Frame = +2
Query: 371 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC-----PSTKDRTP 517
C++ T PCT P ++ CT P +TP+T TPC PSTK TP
Sbjct: 775 CTERYT--PCTKRYIPFAKRYTPCTERYTPYTERYTPSTERYTPCTERYTPSTKRYTP 830
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +2
Query: 395 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 493
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 458 CWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHR 562
C +P T+ P+P PS ++R P G R HR
Sbjct: 224 CRSPFTLPPSPPPSGRERRLPYMDVEGGLSGRSHR 258
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 9/50 (18%)
Frame = +2
Query: 395 PCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC-----PSTKDRTP 517
PCT P + CT+ P +TP T TPC P TK TP
Sbjct: 718 PCTERYTPSTERYTPCTKRYTPSTERYTPCTERYTPCYERYTPCTKRYTP 767
>SB_43997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1067
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +2
Query: 380 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGL 541
+ T PP +SPS S + P P S +P++ SP+ PS+ +PP +S L
Sbjct: 137 YPTYPPSSSPSS--SFPSVPPSSPPSSSSPSSSSPSVPPSSPPSSPPSSSSSSL 188
>SB_37330| Best HMM Match : S-antigen (HMM E-Value=4.1e-09)
Length = 818
Score = 31.5 bits (68), Expect = 0.78
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = +2
Query: 470 ATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRRA 619
A+ SPTP + RTP R P SRS+ HR R H H+ A
Sbjct: 370 ASRSPTPEDWDRSRTPSRSPTPD-SRSQTSNGDKSRKHRKRKKTHKHKHA 418
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.78
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 343 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 459
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 70 CETGLAHT 47
CET L T
Sbjct: 252 CETQLVPT 259
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +2
Query: 383 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHR 562
S+ PP PS P + P PP PA P P PP PA ++P
Sbjct: 47 SSSPPPPPPSPPAAA---PAAPPPPAAAPAAPPPPAAPPAAPPPPPPLPAPPPPPAQPAP 103
Query: 563 LPHEDP 580
P P
Sbjct: 104 QPPPAP 109
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 31.1 bits (67), Expect = 1.0
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 380 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDR-TPPRHPASGLSRS 550
HST ++PS P + CT P P P + TP+T S PST + P P++ + S
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPSTPS 121
Query: 551 RP 556
P
Sbjct: 122 TP 123
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Frame = +2
Query: 401 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDRTP-----PRHPASGLSRSRP 556
++PS PC+ T P P P + TP+T S TPC + TP PR P++ + S P
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPRTPSTPCTHSTP 431
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +2
Query: 377 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDRTP-----PRHPAS 535
K+ R ++PS PC+ T P P P + TP+T S TPC + TP P P++
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPSTPST 59
Query: 536 GLSRSRP 556
+ S P
Sbjct: 60 PCTHSTP 66
Score = 27.9 bits (59), Expect = 9.6
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDRTP--PRHPASGL 541
S ST +PS P + CT P P P + TP+T S TPC + P P P++
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPSTPSTPC 79
Query: 542 SRSRP 556
+ S P
Sbjct: 80 TPSTP 84
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 70 CETGLAHT 47
CET L T
Sbjct: 310 CETQLVLT 317
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = +2
Query: 380 HSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPH 559
H+ +P T P R T+P P T P P+TK +T H + P
Sbjct: 107 HTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKP---PTTKPQTTKPHTTKPRTTKPPT 163
Query: 560 RLPH-EDPHRAR 592
PH PH +
Sbjct: 164 TKPHTTKPHTTK 175
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +2
Query: 380 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP--TPCPSTKDRTPPRH 526
H+T+PP T P +KP + R PP + P T P T +TK T H
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKPH 187
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 70 CETGLAHT 47
CET L T
Sbjct: 130 CETQLVLT 137
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = +2
Query: 413 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTP----PRHPASGLSRSRPH 559
K C C P PP + P T+ PTP P P P PA G ++PH
Sbjct: 87 KTCGTCGDP--PPPATPPPPTMPPTPPPPQTPAPPGPDTPAPPAPGGCGAKPH 137
>SB_28622| Best HMM Match : CcmD (HMM E-Value=0.55)
Length = 1087
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASG 538
P T+P KP S T P+ P +P+T P PST TP H G
Sbjct: 265 PSTTPIKP-SPSTTPIKP-----SPSTTPIKPSPSTTSTTPGVHDRGG 306
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 70 CETGLAHT 47
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 70 CETGLAHT 47
CET L T
Sbjct: 447 CETQLVLT 454
>SB_44859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 650
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 4/55 (7%)
Frame = +2
Query: 377 KHSTRPPCTSPSKPCSRC----TRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHP 529
+H + PP T PS P + T+P PP + P S P PS+ T P +P
Sbjct: 505 QHPSYPP-TQPSYPPTPSSYLPTQPYYPPPQPYPPTQPSYPPTPSSYPPTQPSYP 558
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVV----PPVS-CWTPATVSPTPCPSTKDRTPPRHP 529
P T+PS P + + P + PP + + P S P PS+ T P HP
Sbjct: 201 PPTAPSYPPTPSSYPPIAASYPPTAPSYNPTAPSYPPTPSSYPPTQPSHP 250
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.4
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 70 CETGLAHT 47
CET L T
Sbjct: 288 CETQLVLT 295
>SB_52826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2126
Score = 30.7 bits (66), Expect = 1.4
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 10/99 (10%)
Frame = +3
Query: 327 SPQPQ--GQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYH---RYRAGLRRRC--LP 485
SP+P +RE D + R+ R P +A V + H R+ L+ R P
Sbjct: 1088 SPRPSVITARREVDNEDTTRRPDERNSSRSPVKAHTVTRKDNHQEVRHSEDLQERGDEQP 1147
Query: 486 HRAHLRRIALP---HAILRLDLAGRDLTDYLMKILTERG 593
H AH++ +ALP H L+ DL+D KI +RG
Sbjct: 1148 HPAHIQAVALPNTAHVPLKRHDDDLDLSDQ-SKIFIKRG 1185
>SB_40582| Best HMM Match : Kazal_1 (HMM E-Value=0)
Length = 1568
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 413 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPP 520
K C R VPPVS +P PC TPP
Sbjct: 637 KAFGECGRTTVPPVSTSSPTPTPQDPCTGFNCDTPP 672
>SB_22886| Best HMM Match : LRR_1 (HMM E-Value=2e-06)
Length = 583
Score = 30.7 bits (66), Expect = 1.4
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +3
Query: 498 LRRIALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQ 677
LR I + H I LD+ G ++ + + GY T++ + + K ++ Y AL + +
Sbjct: 95 LRLILMHHNITELDICGTEIPFSELFASSLEGYECTSSLRKLNISHAKGEIDYAALGYFK 154
Query: 678 EMATAASSSSLEKSYEL 728
+ + S ++ ++L
Sbjct: 155 NLTSLDVSHNMFSDFDL 171
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +2
Query: 401 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 505
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_12273| Best HMM Match : fn3 (HMM E-Value=0.021)
Length = 317
Score = 30.7 bits (66), Expect = 1.4
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 289 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSL-YASGRTTGIVLD 465
+ PE + A +N RE +T IMF ++ + I A+L L YA RT G+V
Sbjct: 181 LVPETQYIANVSA-MNGSGYREFVT-IMFWSYGNSTIVPHIPAILRLNYAERRTLGLVFG 238
Query: 466 SGDGVSHTVPIYEGSHSPTPSCV 534
+ + IY +PT +CV
Sbjct: 239 VTALIVTVLSIYCFLANPTCTCV 261
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.4
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 70 CETGLAHT 47
CET L T
Sbjct: 212 CETQLVLT 219
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +3
Query: 327 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 419
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTP 517
PC P PC P V PV V P PS TP
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPSEVAVTP 416
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 493
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/97 (23%), Positives = 32/97 (32%)
Frame = +2
Query: 266 IPSTMSCVSPPRNTQSCSXXXXXXXXXXXXXXXXXCSKHSTRPPCTSPSKPCSRCTRPVV 445
+PS M C PP S + T T+P+ P + T P
Sbjct: 86 LPSWMPCNCPPDEDDSKGGAAGAEEKEEGEGGGDTPTTAPTTA-ATTPTTPTTAPTTPTT 144
Query: 446 PPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRP 556
P + TP T + TP P PA+ + P
Sbjct: 145 PTTAATTPTTAATTPAAGAAAAAAP-PPAAAAAAPPP 180
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 407 PSKPCSRCTRPVVPP 451
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +2
Query: 389 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTK 505
+PP T+PSK T P+ P++ TP T T +TK
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTK 417
>SB_15424| Best HMM Match : PAN (HMM E-Value=0.00016)
Length = 702
Score = 29.9 bits (64), Expect = 2.4
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 8/138 (5%)
Frame = +2
Query: 380 HSTRPPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPP-RHPASGL-SRS 550
HS P +P S+P S+ P + ++ P ++P R P S L S+S
Sbjct: 430 HSQTPTFRAPQSEPHSQSPTVRAPQSEPHSQSSTVRAPQSEPHSQSPTVRAPQSELHSQS 489
Query: 551 RPHRLPHEDPHRARLLVHY-----HRRAGNRS*HQGEAVLRRS*LRAGNGHRCIQQLPRE 715
R P DPH V H ++ + H + +R L++ N RC+ L RE
Sbjct: 490 PTLRAPQSDPHFQSPTVRAPHSDPHFQSPTSNSHFQSSTVRS--LQSANEKRCLFDLERE 547
Query: 716 VLRTSRRSGHHYRKRKFR 769
V R G F+
Sbjct: 548 VDRGKHGPGRRLVNHVFK 565
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -1
Query: 181 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 47
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_19564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -2
Query: 534 DAGWRGGVRSFVDGHGVGDTVAGVQHDTGGTTG 436
DAG+ R+ V+ + DT G +HDT GT+G
Sbjct: 149 DAGFMVRRRALVEKNSSMDTTPGSKHDTRGTSG 181
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 99 GNTARGASSPAKPALHIPEP 40
GNT R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +2
Query: 425 RCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPR--HPA 532
R R P S + T SP P P TK R PP HPA
Sbjct: 1201 RLVRIREPADSQTSKCTTSPQPYPETKSRAPPPPIHPA 1238
>SB_54325| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 416 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASG 538
PC + + PVS TVSP+ P+ K+ P P G
Sbjct: 134 PCEDPQKEEMSPVSSNNRGTVSPSESPNKKESFPLHEPPEG 174
>SB_10963| Best HMM Match : DED (HMM E-Value=7.1e-12)
Length = 349
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +3
Query: 555 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 734
+T+ L+++ +R + F + RD L V L + T ASS S +S LPD
Sbjct: 216 VTEELVQLAAKRTFVFKVEMDETEYRDALLDLLVVKLQANGLLKTIASSRSRRRSKSLPD 275
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 99 GNTARGASSPAKPALHIPEP 40
GNT R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = -3
Query: 482 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 309
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 308 GCSSGATRSSL*KV*CQISP 249
G + A ++ + C + P
Sbjct: 147 GVYATAANVAV-RHACYVGP 165
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 222 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 280
Query: 70 CETGLAHT 47
CET L T
Sbjct: 281 CETQLVLT 288
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +2
Query: 386 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHP---ASGLSRSRP 556
T+P T+P+ T P S P +PTP T P+ P S L++ P
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTP 96
Query: 557 HRLP 568
P
Sbjct: 97 ATTP 100
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 487
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 383 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDRTPPRHPASGLSRSR 553
ST P T+P+ T P + TP +P TP P+T T P PA+ + ++
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPT-PATTPTPTK 104
Query: 554 PHRLPH 571
P H
Sbjct: 105 PTPTAH 110
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
Frame = +2
Query: 383 STRPPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRP 556
+T P T P KP + T P PP P +P P + PP P + P
Sbjct: 168 TTTKPETKPPKPPAPSTIPTPPTPPAPPSPPIPTAPPTPPMPETPLPPGSPHIPPAPLHP 227
Query: 557 HRLPHEDPHRARLL 598
H +P P+ ++ +
Sbjct: 228 H-IPPAPPNPSKAI 240
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 366 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 509
DH + I+ V RH L R R+ H +R L+ + H+A LR +
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREV 321
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 389 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP-STKDRTPPRHP 529
RPP + C+ C P + P T PTP P S+ TPP P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPPPP 181
>SB_5243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/59 (30%), Positives = 22/59 (37%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLP 568
PP P + S P P V A + P P PP P ++RS H LP
Sbjct: 801 PPPNPPLQVTSIPGEPAPPFVKLIASAMAAAFPFPFNPAPAPPITPDDTITRSAVHNLP 859
>SB_4416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 401 TSPSKPCSRCTRPVV-PPVSCWTPATVSPTPCPSTKDRTPPRHPAS 535
T+P +P S P+V PP+ + ++ P TK +TPP+ P S
Sbjct: 94 TTPQQP-SLLDEPIVTPPIPSPSESSSPKRPNRKTKRQTPPQRPKS 138
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 70 CETGLAHT 47
CET L T
Sbjct: 142 CETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1621 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1679
Query: 70 CETGLAHT 47
CET L T
Sbjct: 1680 CETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 649 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 707
Query: 70 CETGLAHT 47
CET L T
Sbjct: 708 CETQLVLT 715
>SB_55297| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 808
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +2
Query: 416 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLP 568
P S ++P V P S + + P + P PAS + +S+P LP
Sbjct: 308 PRSHLSKPTVLPASNMVQSKPTALPASNMVQSKPTALPASNMVQSKPTALP 358
>SB_52129| Best HMM Match : Sec23_trunk (HMM E-Value=0)
Length = 942
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/60 (31%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +2
Query: 380 HSTRP--PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTP--CPSTKDRTPPRHPASGLSR 547
HS +P P PS ++P VPP P + + TP P T D P G +R
Sbjct: 295 HSGKPKRPGMPPSPSVPHQSQPAVPPAFATPPRSGASTPSGAPPTGDEGMAPQPGQGQAR 354
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +1
Query: 658 SLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKIPLP 774
S L S R P PA PSR L+NF + + T+ PLP
Sbjct: 1054 SPLKSRRAMDPKDPATPSRKLSNFIPIITRDKPTR-PLP 1091
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 406 AIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGSHSPTP 525
AIQ V A RTTGI LD G + + + +H+PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELD-GRRIRVDYSVTKRAHTPTP 247
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 70 CETGLAHT 47
CET L T
Sbjct: 263 CETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 1059 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 1117
Query: 70 CETGLAHT 47
CET L T
Sbjct: 1118 CETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 70 CETGLAHT 47
CET L T
Sbjct: 61 CETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 29.1 bits (62), Expect = 4.2
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -1
Query: 247 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 71
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 83 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 141
Query: 70 CETGLAHT 47
CET L T
Sbjct: 142 CETQLVLT 149
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 331 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 459
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 380 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPP 520
H RPP S P +R T P P + PAT +PT +T TPP
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNT---TPP 70
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +2
Query: 380 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDRTPP 520
++T P T+P+KP + T P + PAT +PT P+T TPP
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTK-PTT--TTPP 112
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +2
Query: 383 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDRTPP 520
+T P T+P+KP + T P + PAT +PT +T TPP
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTT---TPP 182
>SB_34828| Best HMM Match : W2 (HMM E-Value=6.9)
Length = 184
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = +2
Query: 437 PVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSR 547
P PP S P V PTP P PPR + +++
Sbjct: 140 PPTPPQSTPKPRRVLPTPPPKPPTPRPPRRASKRIAK 176
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +2
Query: 380 HSTRPPCTSPS-KPCSRCTRPV-VPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSR 553
+ T P P P R P +PP P + P P + D PPR P G S++
Sbjct: 293 YQTAPGYPPPQYMPHPRMRPPTRIPPPGMGPPPRIPPPPIRAPVDVYPPRAP-QGASQTP 351
Query: 554 PHRLPH 571
P+ H
Sbjct: 352 PYPGSH 357
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +2
Query: 407 PSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPHEDP 580
P+ P S+ T+P PP P+ P P PS PP P R +LP P
Sbjct: 195 PTSP-SQITQPPPPPPRP-PPSPPPPPPPPSPSPPRPPPPPPPSPPRPLAAKLPEPPP 250
>SB_48656| Best HMM Match : Extensin_2 (HMM E-Value=0.0009)
Length = 392
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 667 TSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKIPLP 774
+ SR PP P AP L P ++ L + + PLP
Sbjct: 177 SDSRPPPPAEPQAPLPQLAPLPKQQAPLPQQQAPLP 212
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 28.3 bits (60), Expect = 7.3
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPAT---VSPTP-CPSTKDRTPPRHPASGLSRSRPH 559
PP PS P + PP++ + P T +P P P R PP+ P S++ P
Sbjct: 635 PPEVRPSLPGTPPETKTKPPLAPYPPKTSPKTTPKPHIPPAPSRPPPQLPPEA-SKAVPT 693
Query: 560 RLPHEDPHRARL 595
RL AR+
Sbjct: 694 RLAAGSGSPARI 705
>SB_35885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 476
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPV---VPPVSCWTPATVSPTPCPSTKDRTPP 520
PP + S+P + P PP P+T+ P P PS PP
Sbjct: 307 PPPPAASEPAAFAPAPPPSQAPPPPKTIPSTLPPPPVPSATSAPPP 352
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 99 GNTARGASSPAKPALHIPEP 40
GNT R PAKP+L++P P
Sbjct: 540 GNTNRRTRIPAKPSLNLPSP 559
>SB_30534| Best HMM Match : EGF (HMM E-Value=0.12)
Length = 521
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRH-PASGLSRS 550
S+ ST+ P T KP + RP+ P + P + P P T+ P + P + R
Sbjct: 252 SQVSTKQPATERPKPRTEKPRPITQPPTTQRPRPKTRRPEPRTELPQPRTYRPETRTYRP 311
Query: 551 RPHRLPHEDP 580
P R DP
Sbjct: 312 DP-RTYRPDP 320
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 187 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 56
FA CL + V+LSH + H L A +HG R+ SCET L
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 506
>SB_26688| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1199
Score = 28.3 bits (60), Expect = 7.3
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2
Query: 374 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPAS 535
S S P TSP++ T PV+P P V+P P +T PP P S
Sbjct: 512 SDTSDSSPPTSPTQQSPLETTPVLP-----LPEKVTPEPGSTTPPSPPPDSPKS 560
>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
Length = 295
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/50 (40%), Positives = 24/50 (48%)
Frame = +2
Query: 389 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASG 538
RPP T+ + P T P VPP + P T +P P P T P ASG
Sbjct: 220 RPP-TTQTPPTKAPTDPPVPPTNPPVPPT-NP-PAPPTNPPKPGTCKASG 266
>SB_162| Best HMM Match : Extensin_2 (HMM E-Value=0.79)
Length = 820
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 401 TSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPP---RHPASGLSRSRPHR 562
+SP P SR + P P + P PST+D PP R+ + +R RPHR
Sbjct: 310 SSPQSPTKSRIPLMIKSPAKSGRPTPQASRPRPSTQDFEPPQLTRYYSQDQAR-RPHR 366
>SB_53581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1584
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Frame = +2
Query: 398 CTSP--SKPCSRCTRPVVPPVSCWTPA-TVSPTPCPSTKDRTPPR-HPASGLSRSRPHRL 565
C P + PC+ P PPV PA ++P P PP H S + H
Sbjct: 1363 CAPPPMADPCATMAAPCAPPVMMAAPAPMLAPMLAPMPAPCAPPECHTHSVQVKQTHHMA 1422
Query: 566 PHEDPHRA 589
P P A
Sbjct: 1423 PAPPPPMA 1430
>SB_49099| Best HMM Match : rve (HMM E-Value=2e-08)
Length = 553
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = +2
Query: 461 WTPATVSPTP--CPSTKDRTPPRHPA 532
W PA +SPTP + KD PPR+ A
Sbjct: 238 WLPAGISPTPEKVRAIKDAEPPRNVA 263
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 28.3 bits (60), Expect = 7.3
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = +2
Query: 395 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTP 517
P T+P KP S T P+ P +P+T P PST TP
Sbjct: 1310 PSTTPIKP-SPSTTPIKP-----SPSTTPIKPSPSTTSTTP 1344
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 401 TSPSKPC-SRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPP---RHPASGLSRSRPHR 562
+SP P SR + P P + P PST+D PP R+ + +R RPHR
Sbjct: 449 SSPQSPTKSRIPLMIKSPAKSGRPTPQASRPRPSTQDFEPPQLTRYYSQDQAR-RPHR 505
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = +2
Query: 437 PVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYHRR 616
P P +S +P SP P + R R P+S RS R + P + R + RR
Sbjct: 91 PSPPSLSTLSPLAASP---PVSTPRQQRRTPSSFTPRSSISRRRSDTPKKRRRISVSRRR 147
Query: 617 AGN 625
AG+
Sbjct: 148 AGS 150
>SB_8145| Best HMM Match : RNA_pol_Rpb2_6 (HMM E-Value=0)
Length = 893
Score = 28.3 bits (60), Expect = 7.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 740 LTVGKFVRLLEGAAGCSGGHF 678
+TVGK + L+ G AG GHF
Sbjct: 366 MTVGKLIELIAGKAGVLEGHF 386
>SB_31782| Best HMM Match : FH2 (HMM E-Value=1.2e-08)
Length = 1052
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/58 (31%), Positives = 22/58 (37%)
Frame = +2
Query: 404 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASGLSRSRPHRLPHED 577
SP P VPP P + P P P + PP P G S + LP+ D
Sbjct: 181 SPGSPTEDTPWTSVPPPPPPGPGGIPPPP-PPIRGGVPPPPPMGGGSLALDSGLPNRD 237
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 392 PPCTSPSK--PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPR--HPASGL 541
P +PS P + P PP S + P++ PTP PP P+SG+
Sbjct: 499 PSVFAPSSGVPTTVTAPPAAPPPSVFAPSSGVPTPVTEPPPAPPPSVFAPSSGV 552
>SB_40683| Best HMM Match : VWD (HMM E-Value=2.4e-05)
Length = 2200
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 381 IQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIALP 518
I H++ RH S+ L R R HR + RR H+ + P
Sbjct: 1588 IHHSKEYYRHSSKILKSRTRHLHRVKKYWHRRINHKINHISNLLRP 1633
>SB_20903| Best HMM Match : Extensin_2 (HMM E-Value=0.3)
Length = 713
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 413 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTP 517
+PC T P PP + W+P + P P + TP
Sbjct: 235 EPCFTKTEPPAPPSNYWSP-PMQPMQQPDQEQPTP 268
>SB_15668| Best HMM Match : Chorion_3 (HMM E-Value=2.5)
Length = 276
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +2
Query: 413 KPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTP 517
+PC T P PP + W+P + P P + TP
Sbjct: 169 EPCFTKTEPPAPPSNYWSP-PMQPMQQPDQEQPTP 202
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRTPPRHPASG 538
PP P P P PP P P P P T PP P +G
Sbjct: 369 PPTNKPPPPPPPTNGPPPPP----PPTNGPPPPPPPTNGPPPPPPPTNG 413
>SB_7840| Best HMM Match : S-antigen (HMM E-Value=0.11)
Length = 231
Score = 27.9 bits (59), Expect = 9.6
Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = -2
Query: 546 RLSPDAG-WRGGVRSFVDGHGVGDTVAGVQHDTGG----TTGRVQREHGLDGDVHGGRV 385
R+S D G GV D GVGD G D GG GRV + G+ GD GRV
Sbjct: 115 RVSDDGGVGDDGVGRVSDNGGVGDDANGRVSDDGGVGDDAEGRVSDDGGV-GDDGVGRV 172
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 27.9 bits (59), Expect = 9.6
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +2
Query: 392 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDRT------PPRHPASG 538
PP +P P S+ P PP S PAT +P P P T PP PA+G
Sbjct: 112 PPPRAPETP-SQAPSPPPPPTS---PATRAPPPPPPIAPATGGPPPPPPIAPATG 162
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,083,345
Number of Sequences: 59808
Number of extensions: 679761
Number of successful extensions: 3176
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 2485
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3086
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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