Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11049
         (815 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    75   1e-15
AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II ...    61   1e-11
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                53   3e-09
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    50   2e-08
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    50   2e-08
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    44   1e-06
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    41   2e-05
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.9  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   7.8  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 74.5 bits (175), Expect = 1e-15
 Identities = 37/104 (35%), Positives = 54/104 (51%)
 Frame = +1

Query: 1   IKSDNVLLGMDGTVKVTDFGFCANIVGDEKRQTMVGTPYWMAPEVVTRKQYGKKVDVWSL 180
           +K +N+LL   G VK+ DFGF   +    K  T  GTP ++APEV+  K +    D WSL
Sbjct: 492 LKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGTPEYVAPEVILNKGHDISADYWSL 551

Query: 181 GIMAIEMIEGEPPYMKETPLRALYLSRLSGARKYHVGESCPRNS 312
           G++  E++ G PP+    P++  Y   L G        S  RN+
Sbjct: 552 GVLMFELLTGTPPFTGGDPMKT-YNIILKGIDAIEFPRSITRNA 594


>AB013287-1|BAA87893.1|  190|Apis mellifera calmodulin kinase II
           protein.
          Length = 190

 Score = 61.3 bits (142), Expect = 1e-11
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
 Frame = +1

Query: 1   IKSDNVLLGMDG---TVKVTDFGFCANIVGDEKRQT-MVGTPYWMAPEVVTRKQYGKKVD 168
           +K +N+LL        VK+ DFG    + G+ +      GTP +++PEV+ ++ YGK VD
Sbjct: 35  LKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAGTPGYLSPEVLKKEPYGKPVD 94

Query: 169 VWSLGIMAIEMIEGEPPYMKETPLRALYLSRLSGARKY 282
           +W+ G++   ++ G PP+  E   R LY    +G+  Y
Sbjct: 95  IWACGVILYILLVGYPPFWDEDQHR-LYAQIKTGSYDY 131



 Score = 32.7 bits (71), Expect = 0.004
 Identities = 13/42 (30%), Positives = 26/42 (61%)
 Frame = +3

Query: 282 PRWGELSPKFQDFLDKCLQVDVDMRASAEELLEHPFLECAME 407
           P W  ++P+ ++ +++ L V+   R +A E L+HP++ C  E
Sbjct: 134 PEWDTVTPEAKNLINQMLTVNPSKRITASEALKHPWI-CQRE 174


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 53.2 bits (122), Expect = 3e-09
 Identities = 28/86 (32%), Positives = 46/86 (53%)
 Frame = +1

Query: 1   IKSDNVLLGMDGTVKVTDFGFCANIVGDEKRQTMVGTPYWMAPEVVTRKQYGKKVDVWSL 180
           +K  N+L+  +G  K+TDFG    I    +     GTP + APEV+ + +     D++SL
Sbjct: 181 VKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAPEVIKQNRPTPAADIYSL 240

Query: 181 GIMAIEMIEGEPPYMKETPLRALYLS 258
           GI+A +M+  + P+        +YLS
Sbjct: 241 GIVAWQMLFRKLPFAGLHSHTIIYLS 266


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +1

Query: 1   IKSDNVLLGMDGTVKVTDFGFCANIVGDEKRQTMVGTPYWMAPEVVTRKQYGKKVDVWSL 180
           +K  NVLL ++   K+TDFGFC   V      ++VGTP  MAPE+++   Y   VDV++ 
Sbjct: 723 VKLKNVLLDIENRAKLTDFGFCITEV--MMLGSIVGTPVHMAPELLS-GHYDSSVDVYAF 779

Query: 181 GIM 189
           GI+
Sbjct: 780 GIL 782


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 50.4 bits (115), Expect = 2e-08
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = +1

Query: 1   IKSDNVLLGMDGTVKVTDFGFCANIVGDEKRQTMVGTPYWMAPEVVTRKQYGKKVDVWSL 180
           +K  NVLL ++   K+TDFGFC   V      ++VGTP  MAPE+++   Y   VDV++ 
Sbjct: 761 VKLKNVLLDIENRAKLTDFGFCITEV--MMLGSIVGTPVHMAPELLS-GHYDSSVDVYAF 817

Query: 181 GIM 189
           GI+
Sbjct: 818 GIL 820


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 44.4 bits (100), Expect = 1e-06
 Identities = 20/39 (51%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 1   IKSDNVLLGMDGTVKVTDFGFC-ANIVGDEKRQTMVGTP 114
           +K DNVLL  DG +K+ DFG C   I GD+  +T  GTP
Sbjct: 111 LKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKTFCGTP 149


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 40.7 bits (91), Expect = 2e-05
 Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
 Frame = +1

Query: 13  NVLLGMDGTVKVTDFGFCANIVG-DEKRQTMVGTPY---WMAPEVVTRKQYGKKVDVWSL 180
           NVL+      K+ DFG    I    E   T  G      W APE +  +++    DVWS+
Sbjct: 765 NVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAIAFRKFTSASDVWSM 824

Query: 181 GIMAIEMIE-GEPPY 222
           GI+  E++  GE PY
Sbjct: 825 GIVCWEVMSYGERPY 839


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 590 NLKNSYKKMYNNT*QSFVKHY 528
           N  N+Y   YNN  +   K+Y
Sbjct: 100 NYNNNYNNNYNNNYKKLYKNY 120


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 590 NLKNSYKKMYNNT*QSFVKHY 528
           N  N+Y   YNN  +   K+Y
Sbjct: 100 NYNNNYNNNYNNNYKKLYKNY 120


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = -1

Query: 410 QFHCALQEGMF**FFG--GCSHVHVNLEA 330
           QFHCA  EG     F    C  V+V+L A
Sbjct: 3   QFHCAAAEGQAKKSFSCKYCEKVYVSLGA 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 251,798
Number of Sequences: 438
Number of extensions: 6063
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)