Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11048
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   2.2  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   3.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.1  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.8  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   6.8  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 105 LLTNKLCNSVSFFHTKVCVRVI 40
           L TNK CN +  F+  V V ++
Sbjct: 316 LKTNKYCNFIILFYLSVFVILV 337


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -3

Query: 120 HRIVDLLTNKLCNSVSFFHTKVCVRVIKKNNSNI 19
           +R  D+   ++  + +  ++K  V ++KK  SNI
Sbjct: 69  YRQQDVTLLQITKAKNLLYSKQIVTILKKTKSNI 102


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 216 LQFCSFFFYLFY 251
           L F S+FFYL Y
Sbjct: 82  LPFYSYFFYLSY 93


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 216 LQFCSFFFYLFY 251
           L F S+FFYL Y
Sbjct: 38  LPFYSYFFYLSY 49


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -3

Query: 213 FLNAFYFLFF 184
           FLN FYF+ F
Sbjct: 293 FLNNFYFIIF 302


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 349 YSYLSMIFLLNVSSPNK 399
           YSY+S+I +   +SP K
Sbjct: 143 YSYISLITMAIQNSPQK 159


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,360
Number of Sequences: 336
Number of extensions: 2071
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)