Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11045
         (779 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   2.1  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   8.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.4  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 25  RSLRPPLCVLAPALDCLYPETAP 93
           RSLR   CV+ P  DC  P T P
Sbjct: 195 RSLR---CVVPPTEDCDVPSTIP 214


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 480 VIAEDVSYSVCGGGAGPAPS 539
           +IAE V+    GGGAG A S
Sbjct: 109 LIAEGVAGPEKGGGAGAAAS 128


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 7   PQLTPLRSLRPPLCVLAPALDCLYPETA 90
           P L+P+    PP    A A   L P+TA
Sbjct: 116 PTLSPVGVALPPTLPAAAAAALLPPQTA 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,622
Number of Sequences: 336
Number of extensions: 4501
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21065107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)