Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11042X
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p pro...    28   5.8  
AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA...    28   5.8  
AY119546-1|AAM50200.1|  836|Drosophila melanogaster GH25858p pro...    28   7.6  
AE014297-2745|AAN13817.2|  836|Drosophila melanogaster CG4836-PA...    28   7.6  
AE014297-2744|AAN13816.2| 1214|Drosophila melanogaster CG4836-PB...    28   7.6  
AE014297-2743|AAF55731.2| 1217|Drosophila melanogaster CG4836-PC...    28   7.6  

>AY061111-1|AAL28659.1|  494|Drosophila melanogaster LD09584p
           protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 233 PCSVSAQRNSGTKHSRCCTSILRKFSGRQHCVTVDCSGHG 352
           P SV    NSG++ +     + R F+ RQ  +T+D + HG
Sbjct: 113 PLSVCFFVNSGSEANDLALRLARNFTKRQDVITLDHAYHG 152


>AE014296-2311|AAF49794.2|  494|Drosophila melanogaster CG8745-PA
           protein.
          Length = 494

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 233 PCSVSAQRNSGTKHSRCCTSILRKFSGRQHCVTVDCSGHG 352
           P SV    NSG++ +     + R F+ RQ  +T+D + HG
Sbjct: 113 PLSVCFFVNSGSEANDLALRLARNFTKRQDVITLDHAYHG 152


>AY119546-1|AAM50200.1|  836|Drosophila melanogaster GH25858p
           protein.
          Length = 836

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 193 LQHRRPRLPLMQLEAPCSCNFCSLRAIRR 107
           L  R  R+P+ ++E+ C C+ C+ R + +
Sbjct: 701 LVRRHYRVPVPKIESSCQCSLCTSRLLHK 729


>AE014297-2745|AAN13817.2|  836|Drosophila melanogaster CG4836-PA,
           isoform A protein.
          Length = 836

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 193 LQHRRPRLPLMQLEAPCSCNFCSLRAIRR 107
           L  R  R+P+ ++E+ C C+ C+ R + +
Sbjct: 701 LVRRHYRVPVPKIESSCQCSLCTSRLLHK 729


>AE014297-2744|AAN13816.2| 1214|Drosophila melanogaster CG4836-PB,
           isoform B protein.
          Length = 1214

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 193 LQHRRPRLPLMQLEAPCSCNFCSLRAIRR 107
           L  R  R+P+ ++E+ C C+ C+ R + +
Sbjct: 701 LVRRHYRVPVPKIESSCQCSLCTSRLLHK 729


>AE014297-2743|AAF55731.2| 1217|Drosophila melanogaster CG4836-PC,
           isoform C protein.
          Length = 1217

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -2

Query: 193 LQHRRPRLPLMQLEAPCSCNFCSLRAIRR 107
           L  R  R+P+ ++E+ C C+ C+ R + +
Sbjct: 701 LVRRHYRVPVPKIESSCQCSLCTSRLLHK 729


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,627,762
Number of Sequences: 53049
Number of extensions: 404679
Number of successful extensions: 923
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 895
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)