Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11041
         (421 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    75   6e-13
UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: L...    40   0.016
UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1; ...    34   1.0  
UniRef50_Q5KMS7 Cluster: Adenosylmethionine-8-amino-7-oxononanoa...    32   5.4  
UniRef50_Q42685 Cluster: Alanine aminotransferase; n=2; Viridipl...    31   7.2  
UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensi...    31   9.5  
UniRef50_UPI0000E46577 Cluster: PREDICTED: hypothetical protein;...    31   9.5  
UniRef50_Q6UXC1-2 Cluster: Isoform 2 of Q6UXC1 ; n=6; Eutheria|R...    31   9.5  
UniRef50_Q98NJ2 Cluster: Mll0115 protein; n=1; Mesorhizobium lot...    31   9.5  
UniRef50_Q98BL3 Cluster: Rubredoxin reductase; n=1; Mesorhizobiu...    31   9.5  
UniRef50_Q6FSK6 Cluster: Similar to sp|P20053 Saccharomyces cere...    31   9.5  
UniRef50_A5AAE0 Cluster: Putative uncharacterized protein precur...    31   9.5  
UniRef50_Q6UXC1 Cluster: Apical endosomal glycoprotein precursor...    31   9.5  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 74.9 bits (176), Expect = 6e-13
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 255  RYDMSFFKRGLWRVLSGRQRLGSAPGITEVHGRR 356
            RYDMSFFKRGLWRVLSGRQRLGSAPGI EVHGRR
Sbjct: 953  RYDMSFFKRGLWRVLSGRQRLGSAPGIAEVHGRR 986



 Score = 44.8 bits (101), Expect = 7e-04
 Identities = 21/31 (67%), Positives = 25/31 (80%)
 Frame = +1

Query: 163  SNEIRTQQMFTIYLPRTIRLWNELPSTVFPD 255
            S+ +R Q+ F   LPRTIRLWNELPSTVFP+
Sbjct: 925  SSTVRFQRSF---LPRTIRLWNELPSTVFPE 952


>UniRef50_Q0VJV2 Cluster: Like moricin; n=3; Manduca sexta|Rep: Like
           moricin - Manduca sexta (Tobacco hawkmoth) (Tobacco
           hornworm)
          Length = 248

 Score = 40.3 bits (90), Expect = 0.016
 Identities = 18/23 (78%), Positives = 18/23 (78%)
 Frame = +1

Query: 346 MGDGNHSPSGGPYARLHTRAIKK 414
           MGDGNHSPSG PYA L TRA  K
Sbjct: 1   MGDGNHSPSGRPYASLPTRAKMK 23


>UniRef50_Q8MTQ1 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 85

 Score = 34.3 bits (75), Expect = 1.0
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -1

Query: 418 FFFLLPLYADEHTAHLMVSGYRRPWTSVMPGAEPS-RCLPLNTLH 287
           F F +       T +L+   +R  WTS +PGA+P  RCL +N  H
Sbjct: 25  FIFQIKFSCFRQTIYLVDDNHRHSWTSTIPGAQPDHRCL-VNLRH 68


>UniRef50_Q5KMS7 Cluster: Adenosylmethionine-8-amino-7-oxononanoate
           transaminase, putative; n=1; Filobasidiella
           neoformans|Rep:
           Adenosylmethionine-8-amino-7-oxononanoate transaminase,
           putative - Cryptococcus neoformans (Filobasidiella
           neoformans)
          Length = 847

 Score = 31.9 bits (69), Expect = 5.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 147 QRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTSW*GP 16
           ++V  T +S D  A +++ F P + H    GN  YI+++ W  P
Sbjct: 785 RQVVVTPSSSDAAAEDIVPFSPFQIHSRPLGNVVYIITSLWTKP 828


>UniRef50_Q42685 Cluster: Alanine aminotransferase; n=2;
           Viridiplantae|Rep: Alanine aminotransferase -
           Chlamydomonas reinhardtii
          Length = 521

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 73  KSSWPKG*DFRCIRIVRCTGVRNSLPGTNFSNEIRTQQMFTIYLPR 210
           K++   G  F C++++  TG+ +++PG+ F  E  T  + T  LPR
Sbjct: 454 KAAGKAGDVFYCLKLLEATGI-STVPGSGFGQEEGTFHLRTTILPR 498


>UniRef50_UPI0000E4A923 Cluster: PREDICTED: similar to angiotensin
           converting enzyme, partial; n=3; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to angiotensin
           converting enzyme, partial - Strongylocentrotus
           purpuratus
          Length = 926

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +1

Query: 199 YLPRTIRLWNELPSTVFPDAMTCPS 273
           + PRTIR+WN+LP+T    A+T P+
Sbjct: 888 FYPRTIRIWNQLPAT----AVTAPT 908


>UniRef50_UPI0000E46577 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 205

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 22/82 (26%), Positives = 39/82 (47%)
 Frame = -2

Query: 324 QNQAAAYRLILSTSLV*RRTCHSVGKHRGRELIP*PDGTWQVNRKHLLSTYFIRKIGTWQ 145
           QN++  + L +   +  RR  +S    +G E+    D T +VN  +L+S+Y +   G   
Sbjct: 25  QNKSRYFVLHVRVKIAHRRQFNS----KGEEIESNMDATQKVNTGYLMSSYKVEAKGQTD 80

Query: 144 RVSNTGASHDTNAPEVLSFRPR 79
           R++ +  S   N P + S   R
Sbjct: 81  RLTQSQLSALVNKPSLTSLTQR 102


>UniRef50_Q6UXC1-2 Cluster: Isoform 2 of Q6UXC1 ; n=6; Eutheria|Rep:
           Isoform 2 of Q6UXC1 - Homo sapiens (Human)
          Length = 1137

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 183 LSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTS 28
           ++T F   +G W R      +H    PE  S+ PRR H      G+++VS +
Sbjct: 269 IATDFETGLGPWNRSEGWSRNHRAGGPERPSW-PRRDHSRNSAQGSFLVSVA 319


>UniRef50_Q98NJ2 Cluster: Mll0115 protein; n=1; Mesorhizobium
           loti|Rep: Mll0115 protein - Rhizobium loti
           (Mesorhizobium loti)
          Length = 301

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = -1

Query: 391 DEHTAHLMVSGYRRPWTSVMPGAEPSR 311
           D   AH   +G  RPW  V P AEPSR
Sbjct: 96  DALLAHYRAAGISRPWFYVNPHAEPSR 122


>UniRef50_Q98BL3 Cluster: Rubredoxin reductase; n=1; Mesorhizobium
           loti|Rep: Rubredoxin reductase - Rhizobium loti
           (Mesorhizobium loti)
          Length = 417

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
 Frame = -1

Query: 376 HLMVSGYRRPWTSVMPGAEPSRCLPLNTLHKPRLKKDMS*RRET------PWTGAHSIAG 215
           HL+++   RP    +PG++ S  L L +L   RL +D+S R E        + G    A 
Sbjct: 102 HLILATGSRPRLLPLPGSDLSGVLSLRSLADARLIRDLSARSEDVVILGGGFIGLEIAAT 161

Query: 214 WYVASKS*TFVEYVFH*KNWYLATSFEHRCIARYECTGSLIL*ATTIS 71
              A ++ T VE V       +A         R E TG  IL  T+I+
Sbjct: 162 LRAAGRTVTVVEAVDRLLGRAVAPVVASHVRQRLEATGVRILTGTSIA 209


>UniRef50_Q6FSK6 Cluster: Similar to sp|P20053 Saccharomyces
           cerevisiae YPR178w PRP4 U4/U6 snRNP; n=2;
           Saccharomycetales|Rep: Similar to sp|P20053
           Saccharomyces cerevisiae YPR178w PRP4 U4/U6 snRNP -
           Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 500

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = -2

Query: 195 RKHLLSTYFIRKIGTWQRVSNT-GASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTSW*G 19
           +K +  TY I+ +   +R +N    S D  A +V+S RP     T   NG Y+ S SW G
Sbjct: 176 QKTISQTYSIQNVLNKRRAANKYWCSFDLLATQVVSTRPIST-VTFCNNGNYVASGSWNG 234

Query: 18  PI 13
            +
Sbjct: 235 EV 236


>UniRef50_A5AAE0 Cluster: Putative uncharacterized protein
           precursor; n=1; Aspergillus niger|Rep: Putative
           uncharacterized protein precursor - Aspergillus niger
          Length = 635

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
 Frame = +3

Query: 144 VARYQFF**NTYSTNVYDLLATYHPAME*APVHGV-SRRYDMSFFKRGLWRVLSGRQRLG 320
           +A Y F+  NT STNVYDL    +P  E  P +   +  ++++++  GL   +S + R G
Sbjct: 394 MASYAFW--NT-STNVYDLGPPMYPVSENTPPNSTRNPTFELAYWHFGLDVAISWKARRG 450

Query: 321 -SAP-GITEVHGRR*PLTIRWAV 383
             AP   T V     PL + +AV
Sbjct: 451 QQAPQAWTHVKDNLAPLPVVYAV 473


>UniRef50_Q6UXC1 Cluster: Apical endosomal glycoprotein precursor;
           n=11; Eutheria|Rep: Apical endosomal glycoprotein
           precursor - Homo sapiens (Human)
          Length = 1216

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 183 LSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTS 28
           ++T F   +G W R      +H    PE  S+ PRR H      G+++VS +
Sbjct: 269 IATDFETGLGPWNRSEGWSRNHRAGGPERPSW-PRRDHSRNSAQGSFLVSVA 319


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,675,631
Number of Sequences: 1657284
Number of extensions: 10976643
Number of successful extensions: 25000
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24995
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)