Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11041
         (421 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY358419-1|AAQ88785.1| 1137|Homo sapiens PLSS3001 protein.             31   1.6  
AL355987-16|CAI12694.1| 1108|Homo sapiens MAM domain containing ...    31   1.6  
AL355987-15|CAM14253.1| 1153|Homo sapiens MAM domain containing ...    31   1.6  
AF533230-1|AAM97922.1| 1604|Homo sapiens ubiquitin-specific prot...    29   6.3  
AF350251-1|AAK30207.1| 1274|Homo sapiens ubiquitin specific prot...    29   6.3  
AF155116-1|AAD42882.1|  828|Homo sapiens NY-REN-60 antigen protein.    29   6.3  

>AY358419-1|AAQ88785.1| 1137|Homo sapiens PLSS3001 protein.
          Length = 1137

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 183 LSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTS 28
           ++T F   +G W R      +H    PE  S+ PRR H      G+++VS +
Sbjct: 269 IATDFETGLGPWNRSEGWSRNHRAGGPERPSW-PRRDHSRNSAQGSFLVSVA 319


>AL355987-16|CAI12694.1| 1108|Homo sapiens MAM domain containing 4
           protein.
          Length = 1108

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 183 LSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTS 28
           ++T F   +G W R      +H    PE  S+ PRR H      G+++VS +
Sbjct: 157 IATDFETGLGPWNRSEGWSRNHRAGGPERPSW-PRRDHSRNSAQGSFLVSVA 207


>AL355987-15|CAM14253.1| 1153|Homo sapiens MAM domain containing 4
           protein.
          Length = 1153

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = -2

Query: 183 LSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNGAYIVSTS 28
           ++T F   +G W R      +H    PE  S+ PRR H      G+++VS +
Sbjct: 285 IATDFETGLGPWNRSEGWSRNHRAGGPERPSW-PRRDHSRNSAQGSFLVSVA 335


>AF533230-1|AAM97922.1| 1604|Homo sapiens ubiquitin-specific protease
            USP32 protein.
          Length = 1604

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +1

Query: 154  TNFSNEIRTQQMFTIY----LPRTIRLWNELPSTVFP 252
            T+FS+   T +MFT+     LPR I + N +P+TV P
Sbjct: 1012 TDFSSSPSTNEMFTLTTNGDLPRPIFIPNGMPNTVVP 1048


>AF350251-1|AAK30207.1| 1274|Homo sapiens ubiquitin specific
           protease protein.
          Length = 1274

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +1

Query: 154 TNFSNEIRTQQMFTIY----LPRTIRLWNELPSTVFP 252
           T+FS+   T +MFT+     LPR I + N +P+TV P
Sbjct: 682 TDFSSSPSTNEMFTLTTNGDLPRPIFIPNGMPNTVVP 718


>AF155116-1|AAD42882.1|  828|Homo sapiens NY-REN-60 antigen protein.
          Length = 828

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 4/37 (10%)
 Frame = +1

Query: 154 TNFSNEIRTQQMFTIY----LPRTIRLWNELPSTVFP 252
           T+FS+   T +MFT+     LPR I + N +P+TV P
Sbjct: 477 TDFSSSPSTNEMFTLTTNGDLPRPIFIPNGMPNTVVP 513


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,066,366
Number of Sequences: 237096
Number of extensions: 1685544
Number of successful extensions: 3283
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3283
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)