Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV11041
         (421 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    29   1.8  
Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U80836-5|AAB37892.2|  621|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.        27   4.1  
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AL032630-7|CAA21563.1|  241|Caenorhabditis elegans Hypothetical ...    26   9.5  
AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical ...    26   9.5  

>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 16/59 (27%), Positives = 30/59 (50%)
 Frame = -3

Query: 275 EEGHVIASGNTVDGSSFHSRMVRGK*IVNIC*VRISLEKLVPGNEFRTPVHRTIRMHRK 99
           EE   + SG++  G +FH      + I+ I        +L+ G+E R+ ++  +R H+K
Sbjct: 264 EEDKNVCSGDSGGGLTFHQSDSAREFIIAIVSYGSDCVQLIGGSEPRSQINTDVRKHQK 322


>Z81130-2|CAB03417.1|  463|Caenorhabditis elegans Hypothetical
           protein T23G11.3 protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -2

Query: 231 LIP*PDGTWQVNRKHLLSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRR 76
           LIP P+GT ++ RK L+    I   GT++ + +   +    A  +LS  P R
Sbjct: 302 LIPAPEGTDELKRKQLMELAIIN--GTYRPMKSPNPARVMTAVPLLSPTPLR 351


>U80836-5|AAB37892.2|  621|Caenorhabditis elegans Hypothetical
           protein B0432.7 protein.
          Length = 621

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = -2

Query: 195 RKHLLST---YFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRRFHKTVYGNG 49
           R HLL+       ++I TWQ   N    H T AP+  +  P     T+YG G
Sbjct: 482 RHHLLTVCPAQLCQQIATWQFTKNPVVGHLTRAPKDRA-EPLEPQWTIYGIG 532


>U20535-1|AAC46632.1|  463|Caenorhabditis elegans gld-1 protein.
          Length = 463

 Score = 27.5 bits (58), Expect = 4.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -2

Query: 231 LIP*PDGTWQVNRKHLLSTYFIRKIGTWQRVSNTGASHDTNAPEVLSFRPRR 76
           LIP P+GT ++ RK L+    I   GT++ + +   +    A  +LS  P R
Sbjct: 302 LIPAPEGTDELKRKQLMELAIIN--GTYRPMKSPNPARVMTAVPLLSPTPLR 351


>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical
           protein F26H11.2c protein.
          Length = 2266

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -1

Query: 418 FFFLLPLYADEHTAHLMVSGYRRPWTSVMP 329
           +F+L+ LY+D H + +++   +RP+  + P
Sbjct: 30  YFYLIMLYSDCHFSQILLIFLQRPYDDMAP 59


>Z81515-3|CAC42289.2| 1693|Caenorhabditis elegans Hypothetical
           protein F26H11.2b protein.
          Length = 1693

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -1

Query: 418 FFFLLPLYADEHTAHLMVSGYRRPWTSVMP 329
           +F+L+ LY+D H + +++   +RP+  + P
Sbjct: 30  YFYLIMLYSDCHFSQILLIFLQRPYDDMAP 59


>Z81515-2|CAB04197.2| 1691|Caenorhabditis elegans Hypothetical
           protein F26H11.2a protein.
          Length = 1691

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 9/30 (30%), Positives = 20/30 (66%)
 Frame = -1

Query: 418 FFFLLPLYADEHTAHLMVSGYRRPWTSVMP 329
           +F+L+ LY+D H + +++   +RP+  + P
Sbjct: 30  YFYLIMLYSDCHFSQILLIFLQRPYDDMAP 59


>AL032630-7|CAA21563.1|  241|Caenorhabditis elegans Hypothetical
           protein Y62H9A.7 protein.
          Length = 241

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 289 HKPRLKKDMS*RRETPWTGAHSI 221
           HK RL +D+  RR  PW  + +I
Sbjct: 70  HKSRLHQDLDTRRSRPWMSSTAI 92


>AC024826-8|AAF60795.2|  580|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.3a protein.
          Length = 580

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 14/41 (34%), Positives = 16/41 (39%)
 Frame = -1

Query: 403 PLYADEHTAHLMVSGYRRPWTSVMPGAEPSRCLPLNTLHKP 281
           P   D  T      G R P  S +PG E    +P N  H P
Sbjct: 114 PRRRDRRTPPRRSPGRRSPPRSRLPGPERRDVMPFNPRHSP 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,313,748
Number of Sequences: 27780
Number of extensions: 255562
Number of successful extensions: 567
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)