Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV11037
(746 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1220 - 24966169-24966327,24966421-24966552,24966639-249666... 146 2e-35
05_02_0069 - 6324082-6324495 33 0.18
11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047 32 0.56
05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149 31 0.97
03_02_0750 + 10909130-10909616,10912257-10912916,10913139-109135... 31 1.3
02_05_1127 + 34292894-34293284,34293948-34295443 30 1.7
02_05_0237 + 27095817-27097433 30 2.2
08_01_0004 + 39265-39440,39545-39652,41955-43528,43650-43996,440... 29 3.0
07_01_0214 + 1595917-1596526,1597127-1597140,1598414-1598743,159... 29 3.9
02_02_0343 + 9163976-9165220 29 3.9
10_02_0192 + 6517985-6518348,6518647-6518699,6519984-6520021,652... 29 5.2
02_05_1123 + 34275272-34275331,34275451-34275523,34275631-342757... 29 5.2
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 29 5.2
04_04_1079 - 30663919-30665044,30665143-30665298,30665405-306655... 28 6.9
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 28 6.9
08_01_0346 - 3063440-3064189 28 9.1
05_06_0254 - 26706830-26706943,26707063-26707193,26707330-267074... 28 9.1
01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411 28 9.1
>07_03_1220 -
24966169-24966327,24966421-24966552,24966639-24966693,
24967496-24967667,24967771-24967918,24968015-24968050
Length = 233
Score = 146 bits (354), Expect = 2e-35
Identities = 69/85 (81%), Positives = 76/85 (89%)
Frame = +3
Query: 255 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 434
LYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRF+MESGA+GCEV+VSGKLR Q
Sbjct: 88 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQ 147
Query: 435 RAKSMKFVDGLMIHSGDPCNDYVNT 509
RAKSMKF DG MI SG P N Y+++
Sbjct: 148 RAKSMKFKDGYMISSGYPVNLYIDS 172
Score = 142 bits (344), Expect = 3e-34
Identities = 70/81 (86%), Positives = 74/81 (91%)
Frame = +1
Query: 13 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 192
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 193 RIRELTSVVQKRFNIPEQSVD 255
RIRELTSVVQKRFN PE V+
Sbjct: 67 RIRELTSVVQKRFNFPENGVE 87
Score = 72.5 bits (170), Expect = 3e-13
Identities = 35/57 (61%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +2
Query: 509 ATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEP-TSEV 676
A RHVLLRQGVLGIKVKIML WD +GK GP P PD + + PKDE +P T+E+
Sbjct: 173 AVRHVLLRQGVLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHAPKDEDEFSKPLTAEI 229
>05_02_0069 - 6324082-6324495
Length = 137
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 305 GLGDSAKATSSHLFSIQSTDCSGMLNRFCTTEVSS 201
GLG S T++HL +I S+ C G L R C+ V +
Sbjct: 37 GLGYSQLLTTAHLGAISSSSCGGRLGRQCSAAVGA 71
>11_01_0278 - 2068800-2068826,2070001-2070442,2070702-2072047
Length = 604
Score = 31.9 bits (69), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 523 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARA 654
A +T S R G++ + P R+E + T RP PG+ + A A
Sbjct: 455 AERTMSLRGGGESAGSDSPCRREEAKSRTPRPQPGSAGERSAAA 498
>05_02_0059 + 6230139-6230199,6231716-6232506,6233108-6233149
Length = 297
Score = 31.1 bits (67), Expect = 0.97
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 586 QERPEEATTRPHPGNRAQGRARAPR 660
Q R + +T RP PG R++GR+R PR
Sbjct: 194 QLRSDYSTHRPPPGGRSRGRSRHPR 218
>03_02_0750 +
10909130-10909616,10912257-10912916,10913139-10913544,
10914376-10914757,10914918-10915679,10916106-10916165,
10916695-10917105
Length = 1055
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
Frame = +3
Query: 345 RRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGL--MIHSGDPCNDYVNTLPD 518
R G++ ++ES VV+G+ KS+ V L ++H G ND V T+
Sbjct: 493 RLVAAGLVSRLVESDDDWETAVVTGRSCPDALKSLLSVAPLNDILHEGSAANDAVETMIK 552
Query: 519 MCFSDKEY*ESRSKSCCRGTSKA-RTARRSH 608
+ S KE +++S S G R R +H
Sbjct: 553 ILNSPKEETQAKSASALAGLFHCRRDLRETH 583
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 30.3 bits (65), Expect = 1.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = +1
Query: 499 TSTRYQTCASQTRSTRNQGQNHVAVG--PARQERPEEATTRPHPGNRAQGRARAPRADQ 669
TST TC++ T + ++ +A P R P T R HP + A A R ++
Sbjct: 20 TSTSTPTCSAATSRSASRSSRPLAPSRAPGRPRHPPRPTRRAHPASPRASWAEAARLER 78
>02_05_0237 + 27095817-27097433
Length = 538
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 648 GSSLGSVTRMWSGCGFFGPFLPCWSHGNMILTLIPS 541
G+ L +V R GCG+FG + W G + L+PS
Sbjct: 152 GAHLPAVIRALVGCGWFG--IESWIGGRAVFLLLPS 185
>08_01_0004 +
39265-39440,39545-39652,41955-43528,43650-43996,
44090-44322,45308-45412,45531-45705,46443-46658
Length = 977
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -1
Query: 290 AKATSSHLFSIQSTDCSGMLNRFCTTEVSSRILRPFSPS 174
++ + +H F I + S + C+ VS+R+LRPF S
Sbjct: 740 SRKSMNHSFGIGGGETSNTGSSLCSHPVSARLLRPFEQS 778
>07_01_0214 +
1595917-1596526,1597127-1597140,1598414-1598743,
1598853-1598963,1599113-1599269,1603366-1603619,
1603762-1603960,1604341-1604498
Length = 610
Score = 29.1 bits (62), Expect = 3.9
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = -3
Query: 453 TSLIWHVDHAACQIQQLHNHGHQIP**NGEHHSKH 349
T L H AA Q H HGH G HHSKH
Sbjct: 247 TPLALHQAAAAAGPSQYHGHGHPHH-GGGHHHSKH 280
>02_02_0343 + 9163976-9165220
Length = 414
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -1
Query: 275 SHLFSIQSTDCSGMLNRFCTTEVSSRILRPFSPSTL 168
S L S++ +DC M +R+C + +R +P PS+L
Sbjct: 163 SSLQSLRISDCGRMFSRWCMVDAGARTSKPL-PSSL 197
>10_02_0192 +
6517985-6518348,6518647-6518699,6519984-6520021,
6522332-6522717,6523752-6523822,6524620-6524732,
6525019-6525337,6525576-6525886,6526493-6527069,
6530483-6530538,6531643-6532126
Length = 923
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +2
Query: 74 SLGSWPRTAT-PAWKCGSLPSARRSLLWPPGHRVCS 178
++ SWPR P W C S RR L P R C+
Sbjct: 10 AVSSWPRLPRLPPWPCASHAQRRRVLRLLPPRRRCA 45
>02_05_1123 +
34275272-34275331,34275451-34275523,34275631-34275728,
34276012-34276153,34276261-34276361,34276633-34276716,
34276949-34277014,34277102-34277167,34277324-34277404,
34277489-34277566,34277687-34277848,34277936-34278011,
34278111-34278223,34278323-34278751
Length = 542
Score = 28.7 bits (61), Expect = 5.2
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 533 QGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPVPLEPTSEV 676
Q VL I+ K ++ + P P P +EP+ EP P++ S V
Sbjct: 283 QAVLAIEYKRKPEDEESSSSAPLPPPPVSTSESEPEPEPEPVKEVSPV 330
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = -3
Query: 138 RADGSDPHFHAGVAVLGQLPSEELIEFCLENPIS 37
R DG +PH A + G ++ CL P S
Sbjct: 768 RQDGGEPHLQAAAVLAGSRGGDDAAHACLRRPSS 801
>04_04_1079 - 30663919-30665044,30665143-30665298,30665405-30665563,
30665640-30665770,30666230-30666315,30666607-30666673,
30666944-30667023,30667173-30667260,30667380-30667428,
30667516-30667608,30667725-30667808,30667986-30668044,
30668293-30668327,30668416-30668718,30669111-30669275,
30669701-30669780,30670932-30671003,30671143-30671234,
30671359-30671433,30671552-30671688,30671763-30671890,
30671942-30672033,30672473-30672808
Length = 1230
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 475 TLETLAMITSTR-YQTCASQTRSTRNQGQNHVAVGPARQERPEEATTR-PHPGNRAQGRA 648
TLE + + S Q C + +HV P ++ RP + +R P R R
Sbjct: 847 TLEEIEIERSEETVQPCNDKLEENEKADTSHVKHAPRKRGRPSSSASRTAKPAPRPVRRT 906
Query: 649 RAPRADQ 669
RA R +Q
Sbjct: 907 RARRGNQ 913
>02_05_0417 - 28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 28.3 bits (60), Expect = 6.9
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +1
Query: 523 ASQTRSTRNQGQNHVAVGPARQERPEEATTRPHPGNRAQGRARAP 657
A + R+TRN G A + RP + T + G A AP
Sbjct: 1161 AEERRATRNAGGGAAPNKAAPKRRPRKTATNTQAAESSDGNAAAP 1205
>08_01_0346 - 3063440-3064189
Length = 249
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +3
Query: 303 AESLRYKLIGGLAVRRACYGVLR 371
A S L+GG A ACYGVLR
Sbjct: 221 ARSAARVLLGGWAAMAACYGVLR 243
>05_06_0254 -
26706830-26706943,26707063-26707193,26707330-26707417,
26707970-26708087,26708184-26708332,26708787-26708840,
26708963-26709031,26709146-26709246,26709391-26709473,
26709846-26710041,26710171-26710279
Length = 403
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 633 SVTRMWSGCGFFGPFLPCWSH 571
S T M S CGF G CW+H
Sbjct: 211 SSTGMQSNCGFEGQVNACWTH 231
>01_01_0213 + 1833221-1835062,1835429-1835558,1835726-1836411
Length = 885
Score = 27.9 bits (59), Expect = 9.1
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 596 PKKPQPDHILVTEPKDEPVPLEPTS 670
P+ +PD +LV P P PL P +
Sbjct: 129 PRADEPDVVLVLPPSQRPPPLSPAA 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,624,939
Number of Sequences: 37544
Number of extensions: 464090
Number of successful extensions: 1616
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1611
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1980691104
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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